Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 1.0e-157 560.1 290 100.0
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 2.9e-128 462.2 452 61.1
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 4.9e-128 461.5 355 72.7
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 6.2e-123 444.5 324 75.9
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 4.8e-115 418.3 333 70.9
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 8.5e-104 380.9 204 94.1
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 2.4e-98 362.8 356 61.5
Psat5g015840 Pisum sativum HOM05D008859 ORTHO05D007166 8.3e-59 231.5 238 60.5
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.8e-45 187.2 344 41.0
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 4.3e-31 139.4 388 35.6
Psat2g024120 Pisum sativum HOM05D008859 ORTHO05D007166 6.4e-27 125.6 78 87.2
Psat5g067560 Pisum sativum HOM05D008859 ORTHO05D007166 1.2e-25 121.3 176 48.3
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-24 118.2 324 36.1
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 1.3e-24 117.9 67 80.6
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 1.1e-23 114.8 162 40.7
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 2.0e-20 104.0 275 31.3
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 4.6e-17 92.8 103 50.5
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 1.0e-16 91.7 161 37.3
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 3.0e-16 90.1 201 36.8
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 1.3e-14 84.7 82 51.2
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 4.8e-14 82.8 100 42.0
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.1e-13 81.6 80 47.5
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 2.4e-13 80.5 162 35.2
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.5e-12 77.8 80 45.0
Psat0s776g0040 Pisum sativum HOM05D004615 ORTHO05D000385 7.6e-12 75.5 82 41.5
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.3e-11 74.7 80 43.8
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.7e-11 74.3 80 43.8
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 3.8e-11 73.2 80 45.0
AUR62002100 Chenopodium quinoa HOM05D009343 ORTHO05D011970 8.4e-11 72.0 81 42.0
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.1e-10 71.6 153 30.7
AUR62022712 Chenopodium quinoa HOM05D009343 ORTHO05D000385 4.2e-10 69.7 75 42.7
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 7.1e-10 68.9 186 29.6
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 7.1e-10 68.9 231 27.7
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.2e-09 68.2 189 29.6
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.2e-09 68.2 189 29.6
AUR62006471 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.6e-09 67.8 88 39.8
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.6e-09 67.8 111 34.2
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 1.6e-09 67.8 136 33.8
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 2.7e-09 67.0 80 40.0
AUR62028446 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.0e-09 65.9 88 38.6
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.0e-09 65.9 111 33.3
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-08 65.1 80 38.8
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 1.0e-08 65.1 81 42.0
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-08 64.7 87 39.1
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.3e-08 64.7 141 32.6
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.3e-08 64.7 150 28.0
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.8e-08 64.3 81 38.3
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 2.3e-08 63.9 109 34.9
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.3e-08 63.9 85 40.0
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.0e-08 63.5 86 37.2
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 3.0e-08 63.5 62 46.8
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 3.9e-08 63.2 81 37.0
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 5.1e-08 62.8 81 37.0
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 5.1e-08 62.8 81 38.3
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 5.1e-08 62.8 81 37.0
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 5.1e-08 62.8 81 37.0
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 5.1e-08 62.8 81 37.0
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.1e-08 62.8 89 36.0
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 5.1e-08 62.8 182 26.9
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.7e-08 62.4 135 29.6
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.7e-08 62.0 90 38.9
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 8.7e-08 62.0 113 33.6
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.7e-08 62.0 81 38.3
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-07 61.2 70 47.1
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-07 60.8 70 47.1
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 2.5e-07 60.5 88 36.4
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 2.5e-07 60.5 75 37.3
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.PL7LDA Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-07 60.1 70 45.7
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 3.3e-07 60.1 81 35.8
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-07 60.1 85 40.0
Sc22g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.3e-07 60.1 75 38.7
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 7.4e-07 58.9 70 45.7
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 7.4e-07 58.9 70 45.7
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 7.4e-07 58.9 101 34.7
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.4e-07 58.9 73 38.4
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 9.6e-07 58.5 75 38.7
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-06 58.2 86 34.9
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-06 58.2 76 35.5
AUR62039813 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.6e-06 57.8 69 40.6
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.8 79 38.0
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 2.1e-06 57.4 81 35.8
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.1e-06 57.4 79 36.7
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 2.8e-06 57.0 100 38.0
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.8e-06 57.0 127 28.3
DCAR_006099 Daucus carota HOM05D022224 ORTHO05D000385 2.8e-06 57.0 81 40.7
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.7e-06 56.6 71 38.0
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.7e-06 56.6 131 31.3
AUR62042476 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-06 56.2 62 41.9
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.8e-06 56.2 79 36.7
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 4.8e-06 56.2 79 36.7
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 4.8e-06 56.2 79 36.7
DCAR_031271 Daucus carota HOM05D022224 ORTHO05D000385 6.2e-06 55.8 99 33.3
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 8.1e-06 55.5 150 29.3
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 8.1e-06 55.5 79 36.7


User provided reference genes

Program Settings