Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1279g0040 Pisum sativum HOM05D001575 ORTHO05D001536 8.5e-81 303.5 143 100.0
Psat0s3644g0080 Pisum sativum HOM05D001575 ORTHO05D001536 1.7e-76 289.3 142 94.4
Psat0s1279g0080 Pisum sativum HOM05D001575 ORTHO05D001536 4.5e-66 254.6 142 84.5
Psat0s3644g0040 Pisum sativum HOM05D001575 ORTHO05D001536 3.7e-60 235.0 144 78.5
Ca_22433_v3 Cicer arietinum L. HOM05D001575 ORTHO05D001536 3.8e-33 145.2 130 56.2
Psat4g106160 Pisum sativum HOM05D001575 ORTHO05D001536 7.5e-29 131.0 135 51.9
Psat1g147560 Pisum sativum HOM05D001575 ORTHO05D001536 2.7e-26 122.5 150 47.3
Psat1g147600 Pisum sativum HOM05D001575 ORTHO05D001536 2.7e-26 122.5 150 47.3
Ca_03411_v3 Cicer arietinum L. HOM05D001575 ORTHO05D001536 6.0e-26 121.3 148 48.0
Psat1g149120 Pisum sativum HOM05D001575 ORTHO05D001536 7.8e-26 120.9 150 45.3
Ca_04518_v3 Cicer arietinum L. HOM05D001575 ORTHO05D001536 1.7e-25 119.8 136 49.3
Phvul.009G240550 Phaseolus vulgaris HOM05D001575 ORTHO05D001536 1.7e-25 119.8 145 47.6
Phvul.009G240600 Phaseolus vulgaris HOM05D001575 ORTHO05D001536 1.7e-25 119.8 145 47.6
Ca_01829_v3 Cicer arietinum L. HOM05D001575 ORTHO05D001536 2.3e-25 119.4 143 49.0
Psat4g106120 Pisum sativum HOM05D001575 ORTHO05D001536 3.9e-25 118.6 141 51.1
Medtr0263s0020 Medicago truncatula HOM05D001575 ORTHO05D001536 5.6e-24 114.8 145 44.1
Medtr0002s0040 Medicago truncatula HOM05D001575 ORTHO05D001536 9.5e-24 114.0 145 44.1
Medtr0062s0110 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr0062s0130 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr0062s0170 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr2g036240 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr2g036260 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr2g036290 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr8g046730 Medicago truncatula HOM05D001575 ORTHO05D001536 3.1e-22 109.0 156 39.1
Medtr0062s0040 Medicago truncatula HOM05D001575 ORTHO05D001536 4.0e-22 108.6 133 45.1
Medtr0062s0060 Medicago truncatula HOM05D001575 ORTHO05D001536 4.0e-22 108.6 133 45.1
Medtr0062s0090 Medicago truncatula HOM05D001575 ORTHO05D001536 4.0e-22 108.6 133 45.1
Medtr0062s0020 Medicago truncatula HOM05D001575 ORTHO05D001536 6.8e-22 107.8 135 44.4
VMungo1309G1613 Vigna mungo HOM05D001575 ORTHO05D001536 6.8e-22 107.8 141 42.6
Psat1g150480 Pisum sativum HOM05D001575 ORTHO05D001536 2.0e-21 106.3 151 41.1
TPR.G40314 Trifolium pratense HOM05D001575 ORTHO05D001536 2.9e-20 102.4 142 43.0
Medtr0443s0040 Medicago truncatula HOM05D001575 ORTHO05D001536 8.3e-20 100.9 155 40.0
Psat1g149040 Pisum sativum HOM05D001575 ORTHO05D001536 7.0e-19 97.8 144 41.7
Psat1g148600 Pisum sativum HOM05D001575 ORTHO05D001536 1.6e-18 96.7 133 44.4
Lalb_Chr01g0011951 Lupinus albus HOM05D001575 ORTHO05D001536 2.3e-17 92.8 142 34.5
Psat0s521g0080 Pisum sativum HOM05D001575 ORTHO05D001536 6.2e-15 84.7 117 41.0
Migut.N02646 Erythranthe guttata HOM05D001575 ORTHO05D001536 1.8e-14 83.2 135 37.0
Migut.F01368 Erythranthe guttata HOM05D001575 ORTHO05D001536 4.0e-14 82.0 136 37.5
Psat1g150520 Pisum sativum HOM05D001575 ORTHO05D001536 5.2e-14 81.6 141 37.6
Aqoxy2G01926 Aquilegia oxysepala HOM05D001575 ORTHO05D001536 2.0e-13 79.7 138 37.0
Cc03_g12410 Coffea canephora HOM05D001575 ORTHO05D001536 5.8e-13 78.2 144 33.3
SalBow3G4411 Salvia bowleyana HOM05D001575 ORTHO05D001536 5.8e-13 78.2 139 36.7
Migut.O00690 Erythranthe guttata HOM05D001575 ORTHO05D001536 7.5e-13 77.8 111 40.5
ATR0594G033 Amborella trichopoda HOM05D001575 ORTHO05D001536 9.9e-13 77.4 138 37.0
AUR62001857 Chenopodium quinoa HOM05D001575 ORTHO05D001536 1.3e-12 77.0 139 37.4
Lj1A178G40 Lonicera japonica HOM05D001575 ORTHO05D001536 1.7e-12 76.6 138 35.5
Lj1P163T6 Lonicera japonica HOM05D001575 ORTHO05D001536 1.7e-12 76.6 108 37.0
MSTRG.9026 Avicennia marina HOM05D001575 ORTHO05D001536 2.2e-12 76.3 139 35.3
Glyma.11G146899 Glycine max HOM05D001575 ORTHO05D001536 2.2e-12 76.3 137 34.3
Peaxi162Scf00836g00035 Petunia axillaris HOM05D001575 ORTHO05D001536 2.9e-12 75.9 138 35.5
Peaxi162Scf00836g00311 Petunia axillaris HOM05D001575 ORTHO05D001536 2.9e-12 75.9 138 35.5
Peaxi162Scf03664g00001 Petunia axillaris HOM05D001575 ORTHO05D001536 2.9e-12 75.9 138 35.5
AUR62009651 Chenopodium quinoa HOM05D001575 ORTHO05D001536 3.7e-12 75.5 139 36.7
AUR62009652 Chenopodium quinoa HOM05D001575 ORTHO05D001536 3.7e-12 75.5 139 36.7
Cc01_g12020 Coffea canephora HOM05D001575 ORTHO05D001536 3.7e-12 75.5 137 35.0
HPP92_024854 Vanilla planifolia HOM05D001575 ORTHO05D001536 3.7e-12 75.5 111 37.8
HPP92_026602 Vanilla planifolia HOM05D001575 ORTHO05D001536 3.7e-12 75.5 111 37.8
Rhsim01G0223500 Rhododendron simsii HOM05D001575 ORTHO05D001536 8.3e-12 74.3 109 39.4
EL10Ac7g15935 Beta vulgaris HOM05D001575 ORTHO05D001536 1.1e-11 73.9 138 34.8
Cc00_g26220 Coffea canephora HOM05D001575 ORTHO05D001536 1.4e-11 73.6 111 36.0
Glyma.13G330900 Glycine max HOM05D001575 ORTHO05D012480 1.4e-11 73.6 130 38.5
Glyma.15G043300 Glycine max HOM05D001575 ORTHO05D012480 1.4e-11 73.6 109 41.3
Psat5g281960 Pisum sativum HOM05D001575 ORTHO05D012480 2.4e-11 72.8 98 38.8
Lj1P170T4 Lonicera japonica HOM05D001575 ORTHO05D001536 4.1e-11 72.0 147 34.7
Potri.015G100500 Populus trichocarpa HOM05D001575 ORTHO05D001536 4.1e-11 72.0 109 36.7
Thecc.09G331900 Theobroma cacao HOM05D001575 ORTHO05D001536 4.1e-11 72.0 137 32.8
Ah.15g096730 Amaranthus hybridus HOM05D001575 ORTHO05D001536 5.4e-11 71.6 139 34.5
Eucgr.B02439 Eucalyptus grandis HOM05D001575 ORTHO05D001536 7.1e-11 71.2 108 37.0
Rhsim01G0223600 Rhododendron simsii HOM05D001575 ORTHO05D001536 9.2e-11 70.9 112 37.5
TWI75G0259 Tripterygium wilfordii HOM05D001575 ORTHO05D001536 9.2e-11 70.9 113 35.4
Ciclev10028881m.g Citrus clementina HOM05D001575 ORTHO05D001536 1.2e-10 70.5 137 32.1
Manes.11G137300 Manihot esculenta HOM05D001575 ORTHO05D001536 1.2e-10 70.5 137 32.8
Medtr2g096030 Medicago truncatula HOM05D001575 ORTHO05D001536 1.6e-10 70.1 138 34.1
Hma1.2p1_0035F.1_g021780 Hydrangea macrophylla HOM05D001575 ORTHO05D001536 2.1e-10 69.7 107 35.5
SalBow3G2788 Salvia bowleyana HOM05D001575 ORTHO05D001536 2.1e-10 69.7 111 35.1
ATR0594G232 Amborella trichopoda HOM05D001575 ORTHO05D001536 2.7e-10 69.3 109 36.7
Gohir.A03G036700 Gossypium hirsutum HOM05D001575 ORTHO05D001536 2.7e-10 69.3 138 34.8
Medtr1457s0010 Medicago truncatula HOM05D001575 ORTHO05D001536 2.7e-10 69.3 83 44.6
Psat5g256760 Pisum sativum HOM05D001575 ORTHO05D001536 2.7e-10 69.3 109 34.9
Glyma.13G330800 Glycine max HOM05D001575 ORTHO05D001536 3.5e-10 68.9 110 34.5
AUR62032023 Chenopodium quinoa HOM05D001575 ORTHO05D001536 4.6e-10 68.6 106 36.8
Gorai.003G138400 Gossypium raimondii HOM05D001575 ORTHO05D001536 4.6e-10 68.6 110 38.2
DCAR_018863 Daucus carota HOM05D001575 ORTHO05D001536 6.0e-10 68.2 140 32.9
Gohir.D03G131500 Gossypium hirsutum HOM05D001575 ORTHO05D001536 6.0e-10 68.2 138 34.8
Lj1P163T8 Lonicera japonica HOM05D001575 ORTHO05D001536 6.0e-10 68.2 99 37.4
COL.COLO4_33830 Corchorus olitorius HOM05D001575 ORTHO05D001536 7.8e-10 67.8 137 32.8
TPR.G19648 Trifolium pratense HOM05D001575 ORTHO05D001536 1.0e-09 67.4 109 33.9
VMungo1080G1506 Vigna mungo HOM05D001575 ORTHO05D012480 1.0e-09 67.4 107 38.3
AUR62035970 Chenopodium quinoa HOM05D001575 ORTHO05D001536 1.3e-09 67.0 106 36.8
Manes.04G028500 Manihot esculenta HOM05D001575 ORTHO05D001536 1.3e-09 67.0 140 31.4
Lj1P164T11 Lonicera japonica HOM05D001575 ORTHO05D001536 1.7e-09 66.6 91 37.4
MD11G1119200 Malus domestica HOM05D001575 ORTHO05D001536 1.7e-09 66.6 107 31.8
AUR62035973 Chenopodium quinoa HOM05D001575 ORTHO05D001536 3.0e-09 65.9 111 35.1
Oeu062290.1 Olea europaea HOM05D001575 ORTHO05D001536 3.0e-09 65.9 113 32.7
Zm00001eb047940 Zea mays HOM05D001575 ORTHO05D001536 3.0e-09 65.9 107 34.6
Os10g0416100 Oryza sativa ssp. japonica HOM05D001575 ORTHO05D001536 6.6e-09 64.7 112 36.6
Prupe.2G041800 Prunus persica HOM05D001575 ORTHO05D001536 6.6e-09 64.7 112 33.9
Actinidia27677 Actinidia chinensis HOM05D001575 ORTHO05D001536 1.1e-08 63.9 111 33.3
Actinidia37273 Actinidia chinensis HOM05D001575 ORTHO05D001536 1.1e-08 63.9 111 33.3
RcHm_v2.0_Chr2g0120651 Rosa chinensis HOM05D001575 ORTHO05D001536 1.5e-08 63.5 107 34.6
FvH4_1g24210 Fragaria vesca HOM05D001575 ORTHO05D001536 1.9e-08 63.2 108 33.3
FAN19G0354 Fragaria x ananassa HOM05D001575 ORTHO05D001536 1.9e-08 63.2 108 33.3
Psat2g012080 Pisum sativum HOM05D001575 ORTHO05D322904 1.9e-08 63.2 49 59.2
Duzib168G0344 Durio zibethinus HOM05D001575 ORTHO05D001536 2.5e-08 62.8 111 34.2
Glyma.03G030500 Glycine max HOM05D001575 ORTHO05D012480 2.5e-08 62.8 131 32.1
MD02G1278700 Malus domestica HOM05D001575 ORTHO05D001536 3.3e-08 62.4 104 35.6
FAN26G0876 Fragaria x ananassa HOM05D001575 ORTHO05D001536 4.3e-08 62.0 108 34.3
Actinidia00808 Actinidia chinensis HOM05D001575 ORTHO05D001536 7.3e-08 61.2 108 33.3
CSS0026647 Camellia sinensis var. sinensis HOM05D001575 ORTHO05D001536 9.5e-08 60.8 110 30.9
Peaxi162Scf00836g00039 Petunia axillaris HOM05D001575 ORTHO05D001536 1.2e-07 60.5 135 30.4
SEGI_26381 Sequoiadendron giganteum HOM05D001575 ORTHO05D001536 1.2e-07 60.5 143 30.1
Gohir.A03G036600 Gossypium hirsutum HOM05D001575 ORTHO05D001536 2.1e-07 59.7 125 32.8
Potri.005G059400 Populus trichocarpa HOM05D001575 ORTHO05D001536 2.8e-07 59.3 94 35.1
Aqoxy6G00347 Aquilegia oxysepala HOM05D001575 ORTHO05D001536 3.6e-07 58.9 105 32.4
Psat1g148720 Pisum sativum HOM05D001575 ORTHO05D001536 1.8e-06 56.6 55 52.7
CAN.G689.9 Capsicum annuum HOM05D001575 ORTHO05D001536 2.4e-06 56.2 82 32.9
HPP92_026603 Vanilla planifolia HOM05D001575 ORTHO05D001536 2.4e-06 56.2 90 34.4
Thecc.01G129800 Theobroma cacao HOM05D001575 ORTHO05D001536 3.1e-06 55.8 104 33.7
HPP92_024853 Vanilla planifolia HOM05D001575 ORTHO05D001536 4.0e-06 55.5 88 34.1


User provided reference genes

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