Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 9.6e-135 483.4 231 100.0
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 4.4e-111 404.8 232 80.2
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-109 400.2 232 78.9
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 1.3e-107 393.3 231 76.2
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 1.0e-104 383.6 231 75.8
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 5.7e-95 351.3 231 69.3
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 5.7e-95 351.3 231 69.3
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 8.2e-94 347.4 231 68.8
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 1.0e-91 340.5 233 71.2
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.5e-90 335.9 272 58.5
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 7.2e-90 334.3 231 66.7
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-89 332.4 231 65.8
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 6.1e-89 331.3 236 69.1
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-89 331.3 232 66.8
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 6.1e-89 331.3 232 66.8
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.9e-70 269.2 225 55.6
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.7e-70 268.9 226 57.1
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.4e-70 268.1 226 55.3
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.4e-69 266.2 226 56.6
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.4e-69 266.2 226 56.6
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-69 265.4 223 54.3
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.2e-68 263.8 223 55.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.8e-68 261.2 230 55.2
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-67 260.4 226 54.0
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-67 260.4 227 54.6
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-67 260.0 226 53.5
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-67 260.0 223 53.8
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-67 259.2 226 54.0
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 3.9e-67 258.8 225 52.9
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 5.0e-67 258.5 230 53.5
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-66 256.9 225 52.9
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-66 256.5 223 54.3
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.3e-66 255.4 223 52.9
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 9.5e-66 254.2 226 54.4
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 6.2e-65 251.5 216 59.3
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-64 250.8 223 53.4
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-64 250.4 222 53.2
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-64 250.0 219 53.0
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 1.8e-64 250.0 228 52.6
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.3e-64 249.6 228 53.5
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.4e-63 245.4 223 52.0
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.5e-63 244.6 207 56.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.8e-63 244.2 228 52.6
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.3e-62 243.8 228 51.8
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.7e-62 243.4 223 50.7
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 6.4e-62 241.5 226 51.8
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.3e-62 241.1 226 52.7
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-61 239.6 231 51.5
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.1e-61 238.8 206 53.9
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.0e-60 235.0 206 53.4
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 1.1e-58 230.7 219 51.6
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 1.9e-58 229.9 228 49.1
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.6e-58 228.4 225 50.7
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 4.4e-55 218.8 233 48.1
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 4.4e-55 218.8 233 48.1
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 4.4e-55 218.8 233 48.1
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 4.4e-55 218.8 226 47.8
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.7e-54 216.9 232 47.8
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.9e-54 216.1 231 47.6
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.1e-53 214.2 230 48.7
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.2e-52 210.7 236 46.2
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-50 203.0 227 44.9
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 7.3e-50 201.4 174 54.6
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 9.5e-50 201.1 232 44.8
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 2.1e-49 199.9 231 44.2
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.8e-49 199.5 215 49.3
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 2.8e-49 199.5 228 46.5
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 1.4e-48 197.2 187 53.5
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 1.4e-48 197.2 241 42.3
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 5.2e-48 195.3 226 45.6
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.7e-46 190.3 231 43.3
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-46 190.3 227 44.9
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 2.9e-46 189.5 227 46.7
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 4.2e-45 185.7 235 40.4
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 7.1e-45 184.9 224 44.6
EL10Ac4g09362 Beta vulgaris HOM05D005276 ORTHO05D006813 9.2e-45 184.5 234 44.9
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 7.8e-44 181.4 224 43.8
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.3e-43 179.9 227 42.3
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.3e-43 179.9 225 43.6
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 2.3e-43 179.9 225 43.6
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 8.7e-43 177.9 145 57.9
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 8.7e-43 177.9 201 47.8
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.6e-42 175.3 135 58.5
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 1.2e-41 174.1 223 40.4
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 2.1e-41 173.3 228 42.5
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 4.7e-41 172.2 223 42.2
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.1e-40 171.0 225 41.8
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-39 167.5 227 41.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-39 167.2 222 41.0
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 4.4e-39 165.6 164 51.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 5.8e-39 165.2 127 60.6
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 5.8e-39 165.2 222 40.5
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.4e-37 160.6 222 40.1
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 5.4e-37 158.7 143 51.7
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 2.1e-36 156.8 239 38.5
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 2.7e-36 156.4 234 41.0
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.7e-36 156.4 222 39.2
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 1.0e-35 154.5 164 46.3
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.3e-35 153.3 193 40.9
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-34 150.6 145 49.0
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.5e-34 149.8 114 58.8
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 6.2e-33 145.2 228 38.6
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 8.1e-33 144.8 139 51.1
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 8.1e-33 144.8 139 51.1
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 2.4e-32 143.3 228 37.7
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 4.0e-32 142.5 136 50.7
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 3.2e-29 132.9 185 38.9
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 9.3e-29 131.3 228 33.8
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.6e-28 130.6 302 28.1
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 2.3e-27 126.7 206 37.4
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-26 124.0 136 50.0
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 5.6e-26 122.1 127 47.2
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 2.8e-25 119.8 231 33.8
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 6.2e-25 118.6 123 46.3
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-23 114.0 214 32.2
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 2.0e-23 113.6 128 43.0
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 2.6e-23 113.2 180 37.8
AUR62037739 Chenopodium quinoa HOM05D005276 ORTHO05D038198 4.5e-23 112.5 237 34.2
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 5.8e-23 112.1 235 34.0
Phvul.007G264000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.2e-21 106.3 123 47.2
Phvul.002G268600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.5e-20 102.8 195 33.8
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 3.0e-19 99.8 133 40.6
Phvul.007G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-19 99.0 111 44.1
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.3e-17 94.4 113 42.5
RcHm_v2.0_Chr5g0076541 Rosa chinensis HOM05D005276 ORTHO05D006813 1.4e-16 90.9 76 55.3
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.0e-15 87.0 112 42.0
Lj6C426G9 Lonicera japonica HOM05D005276 ORTHO05D006813 5.8e-15 85.5 93 46.2
RcHm_v2.0_Chr5g0076341 Rosa chinensis HOM05D005276 ORTHO05D006813 7.1e-13 78.6 95 41.1
vmacro23329 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 3.0e-11 73.2 127 37.8
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 1.6e-09 67.4 84 41.7
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 3.7e-09 66.2 76 48.7
Dinv42430 Davidia involucrata HOM05D005276 ORTHO05D006813 6.3e-09 65.5 81 40.7
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 1.2e-07 61.2 72 43.1
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 2.0e-07 60.5 85 37.6
Dinv03816 Davidia involucrata HOM05D031496 ORTHO05D029219 6.5e-06 55.5 59 40.7


User provided reference genes

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