Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.3e-86 323.2 176 100.0
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.6e-57 226.5 118 95.8
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.5e-55 219.9 117 93.2
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.6e-52 209.9 118 89.0
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 4.6e-52 208.4 125 82.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 5.9e-52 208.0 125 84.0
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.0e-51 207.2 118 87.3
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.3e-51 206.8 125 83.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.7e-51 206.5 118 86.4
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.7e-51 206.5 118 87.3
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.7e-51 206.5 125 83.2
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.3e-51 206.1 120 85.0
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.3e-51 206.1 120 85.0
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 2.3e-51 206.1 120 85.0
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 3.0e-51 205.7 125 82.4
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 3.0e-51 205.7 125 80.8
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 3.0e-51 205.7 116 88.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.9e-51 205.3 118 87.3
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 5.0e-51 204.9 125 82.4
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 6.6e-51 204.5 119 86.6
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 6.6e-51 204.5 126 82.5
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 8.6e-51 204.1 117 88.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 8.6e-51 204.1 117 88.0
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 8.6e-51 204.1 117 88.0
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 8.6e-51 204.1 117 87.2
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 8.6e-51 204.1 118 85.6
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 8.6e-51 204.1 126 81.7
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.1e-50 203.8 117 87.2
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.1e-50 203.8 118 85.6
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.1e-50 203.8 118 85.6
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-50 203.8 118 85.6
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-50 203.8 118 85.6
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-50 203.8 118 85.6
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.1e-50 203.8 116 87.9
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.5e-50 203.4 118 85.6
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.9e-50 203.0 116 86.2
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.9e-50 203.0 117 87.2
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.9e-50 203.0 125 82.4
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 2.5e-50 202.6 116 87.1
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 3.3e-50 202.2 116 87.1
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 3.3e-50 202.2 117 86.3
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.3e-50 202.2 118 86.4
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 3.3e-50 202.2 119 85.7
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 4.3e-50 201.8 117 86.3
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 4.3e-50 201.8 118 84.7
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 4.3e-50 201.8 119 85.7
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 5.6e-50 201.4 118 83.9
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.6e-50 201.4 125 81.6
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 7.3e-50 201.1 117 86.3
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 9.5e-50 200.7 117 85.5
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.2e-49 200.3 118 84.7
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 1.6e-49 199.9 118 83.9
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.6e-49 199.9 114 88.6
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.6e-49 199.9 114 88.6
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.6e-49 199.9 118 84.7
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.6e-49 199.9 125 80.0
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.1e-49 199.5 116 86.2
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 2.8e-49 199.1 114 86.8
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.8e-49 199.1 116 86.2
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 3.6e-49 198.7 116 85.3
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 3.6e-49 198.7 118 83.9
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 4.7e-49 198.4 118 85.6
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 4.7e-49 198.4 116 85.3
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 6.2e-49 198.0 125 79.2
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 8.0e-49 197.6 115 86.1
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 8.0e-49 197.6 117 85.5
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 8.0e-49 197.6 118 83.9
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.1e-48 197.2 116 85.3
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.1e-48 197.2 116 85.3
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.4e-48 196.8 116 85.3
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.4e-48 196.8 116 85.3
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.4e-48 196.8 116 85.3
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.8e-48 196.4 114 86.8
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 1.8e-48 196.4 118 83.9
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.8e-48 196.4 124 78.2
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.3e-48 196.1 116 81.9
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 3.1e-48 195.7 116 82.8
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 3.1e-48 195.7 116 86.2
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 3.1e-48 195.7 116 83.6
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 4.0e-48 195.3 115 84.3
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 4.0e-48 195.3 116 84.5
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 5.2e-48 194.9 125 79.2
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.2e-48 194.9 116 80.2
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 6.8e-48 194.5 115 85.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.8e-48 194.5 124 79.8
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 8.9e-48 194.1 116 81.0
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.2e-47 193.7 118 82.2
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.5e-47 193.4 117 81.2
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.5e-47 193.4 114 85.1
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 2.0e-47 193.0 116 80.2
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.0e-47 193.0 115 83.5
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 3.4e-47 192.2 118 83.1
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.4e-47 192.2 113 85.0
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 4.4e-47 191.8 114 82.5
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 5.8e-47 191.4 115 83.5
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 9.8e-47 190.7 112 84.8
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.2e-46 189.5 117 82.9
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.9e-46 189.1 124 75.0
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 6.4e-46 188.0 118 73.7
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.9e-45 186.4 116 76.7
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.9e-45 186.4 115 80.0
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.4e-45 186.0 119 80.7
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 7.0e-45 184.5 117 80.3
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 7.0e-45 184.5 150 67.3
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.0e-44 183.0 118 72.9
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 6.0e-44 181.4 114 76.3
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 8.1e-41 171.0 114 72.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.6e-39 166.0 114 78.1
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 3.2e-37 159.1 115 66.1
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 2.1e-36 156.4 93 84.9
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.3e-35 153.7 113 61.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.7e-35 153.3 94 80.9
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 4.3e-34 148.7 114 60.5
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 1.4e-29 133.7 89 76.4
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 2.3e-27 126.3 67 91.0
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.2e-25 120.6 75 80.0
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.2e-23 114.0 66 86.4
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.6e-23 112.8 68 83.8
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 5.8e-23 111.7 68 83.8
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.3e-22 110.5 68 83.8
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 2.1e-17 93.2 51 86.3
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 8.1e-17 91.3 54 83.3
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.4e-16 90.5 120 40.8
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 4.0e-16 89.0 60 76.7
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 4.2e-13 79.0 115 39.1
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 2.7e-12 76.3 117 38.5


User provided reference genes

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