Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 3.0e-268 927.9 472 100.0
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 3.5e-224 781.6 456 89.5
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 4.0e-212 741.5 456 83.8
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 4.6e-208 728.0 456 83.6
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 1.1e-201 706.8 457 79.6
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 1.5e-198 696.4 455 79.1
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 1.9e-198 696.0 455 78.2
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.6e-197 693.0 455 78.0
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 2.1e-197 692.6 444 79.5
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 6.2e-197 691.0 455 77.8
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 2.0e-195 686.0 456 78.3
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 3.8e-194 681.8 466 75.5
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 4.9e-194 681.4 455 76.5
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 5.1e-191 671.4 452 76.5
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 8.7e-191 670.6 457 74.4
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 3.3e-190 668.7 452 75.9
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 1.6e-189 666.4 453 76.6
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.6e-189 666.4 438 78.8
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 2.8e-189 665.6 433 81.5
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 1.1e-188 663.7 455 75.4
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.1e-188 662.1 455 75.4
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 4.0e-188 661.8 438 78.1
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 9.0e-188 660.6 446 75.8
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 1.2e-187 660.2 446 75.3
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 9.9e-187 657.1 460 75.0
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 2.9e-186 655.6 455 74.9
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 6.4e-186 654.4 449 75.7
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 5.5e-185 651.4 458 72.3
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 7.1e-185 651.0 434 76.7
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 7.9e-184 647.5 473 72.3
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 3.9e-183 645.2 434 75.1
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 5.1e-183 644.8 442 74.0
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 1.5e-182 643.3 462 72.9
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 4.3e-182 641.7 432 76.4
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 2.1e-181 639.4 457 72.9
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 3.7e-181 638.6 436 75.2
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 4.8e-181 638.3 427 76.3
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 4.8e-181 638.3 450 74.4
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 6.9e-180 634.4 434 74.7
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 3.4e-179 632.1 456 73.5
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 4.5e-179 631.7 447 73.4
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 3.8e-178 628.6 437 75.1
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.4e-177 626.7 438 73.5
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.4e-177 626.7 450 71.6
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 1.4e-177 626.7 452 72.3
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 1.4e-177 626.7 457 71.6
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.5e-177 625.9 436 74.1
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 1.6e-176 623.2 438 72.8
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.0e-175 619.0 460 69.8
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 3.3e-174 615.5 435 71.0
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 5.7e-174 614.8 436 73.4
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.3e-173 613.6 424 74.1
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 1.4e-172 610.1 457 67.8
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 2.4e-172 609.4 410 74.1
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 4.1e-172 608.6 479 68.7
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 6.9e-172 607.8 438 72.6
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 9.0e-172 607.4 442 70.8
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 7.2e-169 597.8 442 69.7
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 3.6e-168 595.5 421 72.2
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 1.4e-167 593.6 418 72.2
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 1.8e-167 593.2 461 67.5
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.8e-167 593.2 435 71.0
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 1.9e-166 589.7 434 70.7
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 4.3e-166 588.6 450 68.2
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 5.7e-166 588.2 450 69.3
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 2.0e-163 579.7 450 67.6
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 1.7e-162 576.6 389 72.8
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 2.2e-162 576.2 417 70.5
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 8.5e-162 574.3 452 67.3
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 1.1e-161 573.9 420 70.7
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 1.8e-159 566.6 416 68.5
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.0e-159 565.8 447 67.3
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 6.7e-159 564.7 485 63.5
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 4.4e-158 562.0 418 69.1
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 5.7e-158 561.6 417 69.5
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 8.2e-157 557.8 435 67.8
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.4e-156 557.0 435 67.8
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 4.5e-155 552.0 451 69.0
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 9.4e-153 544.3 432 65.5
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.7e-149 533.5 339 81.1
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.1e-148 528.9 444 65.3
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 3.5e-147 525.8 451 63.0
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 1.7e-146 523.5 454 61.0
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 2.2e-141 506.5 457 63.0
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 3.1e-140 502.7 433 60.5
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 2.1e-136 490.0 330 76.1
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 4.7e-136 488.8 406 62.8
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 2.3e-135 486.5 410 61.7
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 5.0e-122 442.2 375 65.6
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 5.4e-116 422.2 432 53.0
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 9.2e-116 421.4 423 52.2
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 2.0e-110 403.7 419 49.9
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 1.9e-108 397.1 423 51.1
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 2.4e-108 396.7 454 53.3
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 5.4e-108 395.6 267 76.4
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 1.0e-106 391.3 276 74.3
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 6.0e-83 312.4 161 97.5
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 8.1e-80 302.0 427 44.0
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 4.0e-71 273.1 203 70.9
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 4.5e-54 216.5 276 45.3
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.1e-47 195.3 158 62.7
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 1.7e-45 188.0 133 71.4
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 9.7e-33 145.6 397 27.7
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 5.3e-23 113.2 78 69.2
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.6e-22 111.7 109 51.4
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 2.0e-22 111.3 64 87.5
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 2.7e-22 110.9 68 77.9
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 1.6e-19 101.7 128 46.1
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-18 98.6 64 70.3
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 3.0e-18 97.4 60 78.3
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.4e-15 88.6 95 53.7
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 3.1e-15 87.4 83 56.6
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 1.5e-12 78.6 269 30.1
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 7.2e-12 76.3 269 29.7
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 3.0e-10 70.9 130 34.6
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 2.6e-09 67.8 180 32.8
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 2.6e-09 67.8 180 32.8
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 3.2e-07 60.8 34 79.4
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.7e-06 57.8 52 51.9
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 7.8e-06 56.2 30 86.7
BraA09t38215Z Brassica rapa HOM05D006535 ORTHO05D033081 7.8e-06 56.2 30 86.7


User provided reference genes

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