Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 3.8e-106 388.3 206 100.0
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 3.8e-58 228.8 205 61.5
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 2.5e-57 226.1 208 60.6
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 3.2e-57 225.7 193 63.2
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 4.2e-57 225.3 208 60.6
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.0e-55 220.7 208 59.6
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.4e-52 210.3 207 58.5
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 1.2e-51 207.2 208 57.7
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 1.8e-39 166.8 160 53.8
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.0e-39 166.0 160 53.8
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 5.2e-39 165.2 161 54.7
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 1.3e-37 160.6 159 49.7
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 3.1e-36 156.0 167 49.7
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 2.3e-34 149.8 199 45.2
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 3.8e-34 149.1 163 47.9
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.6e-32 142.5 185 42.2
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 4.7e-32 142.1 203 41.9
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 2.3e-31 139.8 159 42.8
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 3.0e-31 139.4 142 48.6
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.0e-30 136.7 185 41.1
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 2.0e-30 136.7 169 44.4
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 7.5e-30 134.8 191 46.1
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 9.8e-30 134.4 162 43.8
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 1.4e-28 130.6 159 44.7
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.3e-26 124.0 183 42.6
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 2.9e-26 122.9 159 42.1
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 3.0e-23 112.8 212 38.2
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 1.2e-22 110.9 163 36.2
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 4.4e-22 109.0 156 40.4
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 5.8e-22 108.6 162 37.0
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 7.5e-22 108.2 160 36.2
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 9.8e-22 107.8 181 37.0
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.3e-21 107.5 159 40.9
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 3.7e-21 105.9 181 36.5
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 7.0e-20 101.7 164 37.8
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 4.6e-19 99.0 145 40.7
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 6.6e-18 95.1 107 48.6
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.1e-17 94.4 141 39.7
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 1.5e-17 94.0 130 35.4
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 5.6e-17 92.0 152 36.8
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 2.1e-16 90.1 194 32.0
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 2.8e-16 89.7 216 31.9
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 3.6e-16 89.4 130 36.9
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 4.7e-16 89.0 213 33.3
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 2.3e-15 86.7 194 30.9
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 6.8e-15 85.1 194 30.9
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 6.8e-15 85.1 211 30.3
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 1.2e-14 84.3 179 31.8
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 3.4e-14 82.8 214 30.8
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 7.5e-14 81.6 213 31.5
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.3e-13 80.9 160 28.8
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 1.7e-13 80.5 164 32.3
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 2.2e-13 80.1 179 31.3
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 4.9e-13 79.0 143 34.3
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 5.0e-10 68.9 85 41.2
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 7.5e-06 55.1 90 35.6


User provided reference genes

Program Settings