Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 2.4e-153 545.4 266 100.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 9.1e-121 437.2 264 78.0
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 3.5e-120 435.3 269 77.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 6.2e-93 344.7 271 64.6
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.4e-92 343.6 252 66.3
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.4e-92 343.6 252 66.3
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 2.3e-92 342.8 254 66.5
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.6e-91 339.3 272 65.8
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.9e-89 333.2 263 63.1
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 6.0e-88 328.2 263 64.3
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.5e-86 323.6 254 63.8
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 9.5e-86 320.9 270 61.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 3.6e-85 318.9 268 61.2
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 4.7e-85 318.5 256 62.9
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 4.7e-85 318.5 249 63.9
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.1e-84 317.4 258 63.2
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.1e-84 317.4 254 63.0
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.1e-84 317.4 258 61.6
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 8.9e-84 314.3 261 60.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.3e-82 310.5 262 60.3
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 7.1e-81 304.7 262 59.2
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 9.2e-81 304.3 246 60.6
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 4.6e-80 302.0 271 57.9
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.0e-79 300.8 250 62.4
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.0e-79 300.8 265 59.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.7e-79 300.1 256 59.8
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 3.0e-79 299.3 258 59.3
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 6.6e-79 298.1 383 44.9
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 8.6e-79 297.7 267 56.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 9.5e-78 294.3 261 57.5
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.1e-77 293.1 267 55.8
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 2.1e-77 293.1 240 61.2
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 4.7e-77 292.0 265 57.0
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 6.2e-77 291.6 268 56.7
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 8.1e-77 291.2 251 59.4
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 2.0e-75 286.6 238 60.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.6e-75 286.2 250 58.8
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 2.2e-74 283.1 271 55.4
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 1.4e-73 280.4 291 51.2
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 5.4e-73 278.5 267 55.4
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.6e-72 276.9 270 55.9
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 2.1e-72 276.6 246 57.7
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.0e-71 274.2 277 50.9
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.9e-71 272.3 256 55.5
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-70 270.8 270 53.0
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 1.5e-70 270.4 272 52.6
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.3e-70 269.2 210 62.9
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.6e-70 268.5 254 55.5
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 9.6e-70 267.7 255 54.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 9.6e-70 267.7 269 50.6
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.8e-68 263.5 255 53.3
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 9.0e-68 261.2 187 68.4
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 9.0e-68 261.2 267 51.3
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 4.4e-67 258.8 263 51.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 4.4e-67 258.8 265 55.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 7.6e-67 258.1 271 50.2
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 9.9e-67 257.7 264 52.3
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 1.3e-66 257.3 273 51.3
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 6.4e-66 255.0 252 50.8
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.9e-65 253.4 256 52.3
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.4e-65 253.1 264 51.1
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.2e-65 252.3 253 51.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 4.2e-65 252.3 264 51.1
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 5.4e-65 251.9 223 57.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.2e-64 250.8 266 48.1
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.6e-64 250.4 264 50.8
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.6e-64 250.4 264 50.8
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.6e-64 250.4 264 50.8
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.7e-64 249.6 256 51.6
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 4.6e-64 248.8 267 50.2
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 7.8e-64 248.1 313 45.0
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.0e-63 247.7 265 50.9
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.5e-62 243.0 283 47.7
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 4.3e-62 242.3 221 57.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.8e-60 236.9 268 49.3
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.8e-60 236.9 196 60.7
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 6.9e-60 235.0 334 42.2
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.9e-57 226.9 240 49.2
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 5.4e-57 225.3 178 63.5
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.6e-56 223.8 181 58.6
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.0e-55 221.1 235 46.0
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 6.7e-55 218.4 250 47.6
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.9e-54 216.9 237 50.2
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 4.0e-52 209.1 216 50.5
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 4.0e-52 209.1 240 47.1
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 4.5e-51 205.7 254 45.7
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.9e-47 192.6 140 63.6
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.8e-45 186.4 254 44.5
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.8e-45 186.4 275 43.6
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 8.2e-45 184.9 254 44.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 2.6e-43 179.9 241 41.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 3.8e-34 149.4 146 56.2
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 8.8e-31 138.3 177 44.6
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.5e-30 137.5 154 48.7
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.9e-30 137.1 270 37.0
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 3.1e-28 129.8 246 34.1
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.6e-24 117.5 230 34.8
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 6.1e-24 115.5 201 33.8
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.4e-20 104.4 169 37.3
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.6e-19 100.1 263 31.6
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 4.5e-19 99.4 134 44.0
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 4.2e-17 92.8 250 30.4
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.3e-14 83.2 80 53.8
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 1.0e-10 71.6 116 36.2
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 6.7e-07 58.9 41 70.7


User provided reference genes

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