Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G260200 Prunus persica HOM05D000141 ORTHO05D334810 2.1e-223 778.9 440 100.0
Prupe.7G188900 Prunus persica HOM05D000141 ORTHO05D004489 3.0e-20 104.0 174 46.6
RcHm_v2.0_Chr2g0096601 Rosa chinensis HOM05D000141 ORTHO05D004489 3.1e-17 94.0 176 44.3
QL06p053568 Quercus lobata HOM05D000141 ORTHO05D004489 5.3e-17 93.2 178 40.4
MD02G1106300 Malus domestica HOM05D000141 ORTHO05D004489 2.9e-15 87.4 178 40.4
CiPaw.08G183100 Carya illinoinensis HOM05D000141 ORTHO05D004489 3.8e-15 87.0 178 37.6
FAN26G1899 Fragaria x ananassa HOM05D000141 ORTHO05D004489 3.8e-15 87.0 178 42.1
FvH4_1g09831 Fragaria vesca HOM05D000141 ORTHO05D004489 1.1e-14 85.5 178 41.6
FAN19G2837 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.1e-14 85.5 178 41.6
FAN23G0353 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.1e-14 85.5 178 41.6
FAN23G1938 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.1e-14 85.5 178 41.6
FAN28G1293 Fragaria x ananassa HOM05D000141 ORTHO05D004489 1.9e-14 84.7 178 41.6
Thecc.01G000500 Theobroma cacao HOM05D000141 ORTHO05D004489 2.5e-14 84.3 179 37.4
MD15G1226100 Malus domestica HOM05D000141 ORTHO05D004489 1.2e-13 82.0 173 39.9
CANSAT25G2595 Cannabis sativa HOM05D000141 ORTHO05D004489 2.7e-13 80.9 178 35.4
Manes.01G158800 Manihot esculenta HOM05D000141 ORTHO05D004489 6.1e-13 79.7 178 35.4
ClCG10G000070 Citrullus lanatus HOM05D000141 ORTHO05D004489 1.4e-12 78.6 177 35.0
Potri.001G455300 Populus trichocarpa HOM05D000141 ORTHO05D004489 1.4e-12 78.6 160 37.5
MELO3C013702.2 Cucumis melo HOM05D000141 ORTHO05D004489 3.0e-12 77.4 177 35.0
CsaV3_3G000080 Cucumis sativus L. HOM05D000141 ORTHO05D004489 3.0e-12 77.4 177 35.0
MBI01_g31984_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 5.2e-12 76.6 175 37.7
PGR119G2404 Punica granatum HOM05D000141 ORTHO05D004489 1.2e-11 75.5 192 31.8
Duzib147G0825 Durio zibethinus HOM05D000141 ORTHO05D004489 1.5e-11 75.1 179 35.8
Potri.011G146700 Populus trichocarpa HOM05D000141 ORTHO05D004489 2.0e-11 74.7 160 36.2
CSS0021249 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 2.6e-11 74.3 178 33.1
TAR381G1317 Trochodendron aralioides HOM05D000141 ORTHO05D004489 2.6e-11 74.3 177 34.5
Eucgr.I02176 Eucalyptus grandis HOM05D000141 ORTHO05D004489 4.4e-11 73.6 178 33.7
Glyma.01G155300 Glycine max HOM05D000141 ORTHO05D004489 4.4e-11 73.6 181 33.7
Sabra16G0308000 Salix brachista HOM05D000141 ORTHO05D004489 5.7e-11 73.2 160 36.9
Sed0006453 Sechium edule HOM05D000141 ORTHO05D004489 5.7e-11 73.2 177 32.8
Hma1.2p1_0085F.1_g044180 Hydrangea macrophylla HOM05D000141 ORTHO05D004489 1.3e-10 72.0 193 32.1
Lalb_Chr16g0391741 Lupinus albus HOM05D000141 ORTHO05D004489 1.7e-10 71.6 178 32.6
Atru.chr3.3 Acer truncatum HOM05D000141 ORTHO05D004489 2.2e-10 71.2 128 39.8
Glyma.11G089400 Glycine max HOM05D000141 ORTHO05D004489 2.2e-10 71.2 189 31.2
Lsat_1_v5_gn_2_72800 Lactuca sativa HOM05D000141 ORTHO05D004489 2.2e-10 71.2 178 33.1
Lj4g0000360 Lotus japonicus HOM05D000141 ORTHO05D004489 3.7e-10 70.5 178 31.5
TPR.G33746 Trifolium pratense HOM05D000141 ORTHO05D004489 3.7e-10 70.5 177 33.3
Dinv19108 Davidia involucrata HOM05D000141 ORTHO05D004489 6.3e-10 69.7 172 37.2
Sc03g0004200 Simmondsia chinensis HOM05D000141 ORTHO05D004489 8.3e-10 69.3 178 30.3
Actinidia17134 Actinidia chinensis HOM05D000141 ORTHO05D004489 1.1e-09 68.9 178 32.6
Gohir.A02G179100 Gossypium hirsutum HOM05D000141 ORTHO05D004489 1.1e-09 68.9 167 35.3
PSO170G4746 Papaver somniferum HOM05D000141 ORTHO05D004489 1.1e-09 68.9 178 33.7
Ciclev10024719m.g Citrus clementina HOM05D000141 ORTHO05D004489 1.4e-09 68.6 178 33.1
Ca_22442_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.8e-09 68.2 178 30.9
Ca_22449_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 1.8e-09 68.2 178 30.9
Gohir.D03G000600 Gossypium hirsutum HOM05D000141 ORTHO05D004489 2.4e-09 67.8 167 34.7
MBI04_g23902_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004489 2.4e-09 67.8 178 32.0
Gorai.003G001000 Gossypium raimondii HOM05D000141 ORTHO05D004489 3.1e-09 67.4 167 34.7
GSVIVG01026414001 Vitis vinifera HOM05D000141 ORTHO05D004489 3.1e-09 67.4 178 33.1
Medtr5g025100 Medicago truncatula HOM05D000141 ORTHO05D004489 4.1e-09 67.0 175 32.0
arahy.Tifrunner.gnm1.ann1.C6YA57 Arachis hypogaea HOM05D000141 ORTHO05D004489 5.4e-09 66.6 178 30.3
VMungo1215G2882 Vigna mungo HOM05D000141 ORTHO05D004489 5.4e-09 66.6 178 32.6
Glyma.09G194900 Glycine max HOM05D000141 ORTHO05D004489 7.0e-09 66.2 161 35.4
THA.LOC104824715 Tarenaya hassleriana HOM05D000141 ORTHO05D004489 7.0e-09 66.2 178 30.9
Lj2g0025271 Lotus japonicus HOM05D000141 ORTHO05D004489 9.1e-09 65.9 189 29.6
arahy.Tifrunner.gnm1.ann1.77JLPP Arachis hypogaea HOM05D000141 ORTHO05D004489 2.0e-08 64.7 159 34.6
arahy.Tifrunner.gnm1.ann1.L4A5BH Arachis hypogaea HOM05D000141 ORTHO05D004489 2.0e-08 64.7 159 34.6
Psat4g106800 Pisum sativum HOM05D000141 ORTHO05D004489 2.0e-08 64.7 178 31.5
Rhsim10G0188900 Rhododendron simsii HOM05D000141 ORTHO05D004489 2.7e-08 64.3 160 31.9
vmacro20418 Vaccinium macrocarpon HOM05D000141 ORTHO05D004489 2.7e-08 64.3 189 30.7
VMungo0251G0509 Vigna mungo HOM05D000141 ORTHO05D004489 4.5e-08 63.5 161 34.2
MSTRG.3653 Avicennia marina HOM05D000141 ORTHO05D004489 5.9e-08 63.2 189 31.7
CSS0002075 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004489 5.9e-08 63.2 163 30.7
Migut.K01161 Erythranthe guttata HOM05D000141 ORTHO05D004489 5.9e-08 63.2 189 30.2
Nn6g31557 Nelumbo nucifera HOM05D000141 ORTHO05D004489 5.9e-08 63.2 175 30.9
Phvul.003G279200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 7.7e-08 62.8 177 29.9
Psat2g146880 Pisum sativum HOM05D000141 ORTHO05D004489 7.7e-08 62.8 162 35.2
SalBow5G4210 Salvia bowleyana HOM05D000141 ORTHO05D004489 7.7e-08 62.8 178 31.5
Aa31LG1G14480 Aethionema arabicum HOM05D000522 ORTHO05D004489 1.3e-07 62.0 178 29.8
Cc07_g12380 Coffea canephora HOM05D000141 ORTHO05D004489 1.3e-07 62.0 178 29.8
Lj2C507G14 Lonicera japonica HOM05D000141 ORTHO05D004489 1.3e-07 62.0 178 31.5
Phvul.002G120200 Phaseolus vulgaris HOM05D000141 ORTHO05D004489 2.2e-07 61.2 77 46.8
HPP92_022027 Vanilla planifolia HOM05D000141 ORTHO05D004489 2.2e-07 61.2 163 31.9
CsaV3_UNG147160 Cucumis sativus L. HOM05D000141 ORTHO05D004489 2.9e-07 60.8 157 30.6
HanXRQChr14g0443671 Helianthus annuus HOM05D000141 ORTHO05D004489 5.0e-07 60.1 160 31.2
Aqoxy6G03061 Aquilegia oxysepala HOM05D000141 ORTHO05D004489 6.5e-07 59.7 177 28.8
Glyma.16G111200 Glycine max HOM05D000141 ORTHO05D004489 6.5e-07 59.7 177 31.1
Pp3c9_4530 Physcomitrium patens HOM05D000141 ORTHO05D004489 6.5e-07 59.7 126 32.5
Lalb_Chr09g0324901 Lupinus albus HOM05D000141 ORTHO05D004489 8.5e-07 59.3 157 31.2
Oeu025038.1 Olea europaea HOM05D000141 ORTHO05D004489 8.5e-07 59.3 165 32.7
Cpa.g.sc17.14 Carica papaya HOM05D000141 ORTHO05D004489 1.1e-06 58.9 177 31.1
COL.COLO4_22572 Corchorus olitorius HOM05D000141 ORTHO05D004489 1.1e-06 58.9 182 30.2
arahy.Tifrunner.gnm1.ann1.SMPN38 Arachis hypogaea HOM05D000141 ORTHO05D004489 1.5e-06 58.5 178 28.7
SMO118G0228 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 1.5e-06 58.5 134 32.8
SMO222G0019 Selaginella moellendorffii HOM05D000141 ORTHO05D004489 1.5e-06 58.5 134 32.8
TPR.G14268 Trifolium pratense HOM05D000141 ORTHO05D004489 1.5e-06 58.5 178 27.5
CARHR053030 Cardamine hirsuta HOM05D000141 ORTHO05D004489 1.9e-06 58.2 190 28.9
TWI31G1431 Tripterygium wilfordii HOM05D000141 ORTHO05D004489 1.9e-06 58.2 79 45.6
AL8G45710 Arabidopsis lyrata HOM05D000141 ORTHO05D004489 2.5e-06 57.8 178 29.2
Ca_25026_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004489 2.5e-06 57.8 168 31.0
DCAR_000973 Daucus carota HOM05D000141 ORTHO05D004489 2.5e-06 57.8 178 29.2
arahy.Tifrunner.gnm1.ann1.5I81MV Arachis hypogaea HOM05D000141 ORTHO05D000285 3.2e-06 57.4 150 34.7
Haze_03652 Corylus avellana HOM05D000141 ORTHO05D004489 4.2e-06 57.0 127 37.0
Hund19674 Selenicereus undatus HOM05D000141 ORTHO05D004489 4.2e-06 57.0 156 29.5
Ah.03g149220 Amaranthus hybridus HOM05D000141 ORTHO05D004489 5.5e-06 56.6 162 30.2
CAN.G883.8 Capsicum annuum HOM05D000141 ORTHO05D004489 5.5e-06 56.6 178 30.3
Peaxi162Scf00981g00112 Petunia axillaris HOM05D000141 ORTHO05D004489 5.5e-06 56.6 87 42.5
Carub.0008s2860 Capsella rubella HOM05D000141 ORTHO05D004489 7.2e-06 56.2 192 27.6
Zm00001eb433100 Zea mays HOM05D000141 ORTHO05D004489 7.2e-06 56.2 177 28.8
Pp3c15_3730 Physcomitrium patens HOM05D000141 ORTHO05D004489 9.4e-06 55.8 126 31.7


User provided reference genes

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