Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 5.1e-221 770.8 389 100.0
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 4.5e-145 518.5 412 70.9
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 6.4e-123 444.9 436 58.3
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 5.1e-120 435.3 437 57.2
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.8e-113 411.4 445 54.8
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.1e-105 386.7 417 54.7
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 2.9e-91 339.7 376 54.8
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 8.2e-78 295.0 394 47.0
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 3.4e-76 289.7 370 48.6
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.3e-72 276.9 304 53.9
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 3.9e-72 276.2 386 47.4
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 4.3e-71 272.7 385 45.5
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.4e-69 267.7 330 50.0
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.1e-69 266.5 389 45.8
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.3e-67 261.2 368 45.4
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 2.1e-65 253.8 400 42.5
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 3.6e-65 253.1 372 44.6
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 1.5e-63 247.7 373 44.0
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.5e-63 247.7 426 39.9
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.4e-61 240.4 395 42.0
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 4.5e-60 236.1 452 37.8
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.2e-59 233.8 390 43.1
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 9.4e-58 228.4 307 47.2
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.2e-52 211.5 397 39.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.6e-52 211.1 372 40.1
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.0e-52 210.7 239 50.6
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 7.2e-50 202.2 376 38.3
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 1.4e-48 198.0 356 38.2
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 2.3e-48 197.2 367 39.5
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 2.6e-47 193.7 391 35.8
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 2.2e-46 190.7 368 37.5
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.7e-46 189.9 376 36.4
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 8.3e-46 188.7 356 37.1
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 9.1e-45 185.3 270 47.4
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 2.7e-44 183.7 398 38.2
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 3.5e-44 183.3 359 37.0
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 1.0e-43 181.8 408 36.8
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.0e-43 181.8 374 36.9
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 3.2e-42 176.8 331 38.4
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.6e-41 174.5 374 36.4
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 1.6e-41 174.5 374 36.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 4.7e-41 172.9 351 37.6
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 1.0e-40 171.8 293 40.6
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 7.5e-39 165.6 395 34.9
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.4e-37 161.4 364 35.2
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 9.1e-37 158.7 382 34.6
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 3.5e-36 156.8 387 32.8
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 5.9e-36 156.0 402 32.8
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.7e-35 154.5 400 33.5
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.9e-35 153.7 349 35.2
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 4.3e-34 149.8 364 34.1
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 5.6e-34 149.4 322 36.0
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 7.2e-34 149.1 369 33.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.6e-33 147.9 393 35.1
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 6.1e-33 146.0 381 34.4
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.8e-32 144.4 386 33.9
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.3e-32 144.1 410 31.0
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 8.9e-32 142.1 304 35.9
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.2e-31 141.7 376 33.2
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 3.4e-31 140.2 366 33.1
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.7e-31 139.4 385 31.9
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 5.7e-31 139.4 392 31.9
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.7e-30 137.9 376 33.0
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.7e-30 137.9 384 32.6
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 4.9e-30 136.3 383 32.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 6.4e-30 136.0 370 31.4
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 8.3e-30 135.6 385 34.0
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.1e-29 135.2 377 31.8
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.7e-28 130.6 343 31.5
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.7e-28 130.6 372 32.5
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 5.0e-27 126.3 400 30.8
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 6.6e-27 125.9 408 30.1
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 4.3e-26 123.2 378 29.9
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 5.6e-26 122.9 370 31.1
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 2.1e-25 120.9 196 40.8
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.4e-24 118.2 400 29.5
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.4e-24 118.2 253 36.8
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 2.3e-24 117.5 356 31.2
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 3.4e-23 113.6 240 32.1
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 2.9e-22 110.5 216 43.1
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 6.4e-22 109.4 190 36.8
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 6.4e-22 109.4 340 32.9
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 7.0e-21 105.9 172 37.8
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 4.6e-20 103.2 162 38.9
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 1.0e-19 102.1 277 34.7
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 1.3e-19 101.7 353 30.6
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 2.3e-19 100.9 305 31.8
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 5.0e-19 99.8 159 34.0
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 8.6e-19 99.0 347 30.0
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 1.9e-18 97.8 316 32.6
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.8e-17 94.0 126 38.1
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 3.6e-17 93.6 228 34.6
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 1.5e-15 88.2 178 38.8
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 7.5e-15 85.9 98 46.9
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.1e-13 82.0 296 29.1
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 9.2e-13 79.0 91 47.3
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.9e-10 71.2 169 33.1
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 3.3e-10 70.5 282 28.0
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.6e-09 68.2 195 31.3
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 4.0e-08 63.5 96 31.2
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 5.8e-07 59.7 193 24.9


User provided reference genes

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