Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 5.4e-62 240.7 115 100.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 5.4e-62 240.7 115 100.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-54 216.5 113 90.3
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.7e-52 209.1 113 87.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.1e-51 206.5 109 85.3
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 3.3e-51 204.9 109 85.3
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 4.3e-51 204.5 106 87.7
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.1e-50 202.2 113 81.4
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.1e-50 202.2 113 81.4
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 6.2e-50 200.7 114 84.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.1e-49 199.9 112 80.4
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.1e-49 199.9 113 80.5
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.1e-49 199.9 106 84.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.0e-49 198.0 106 84.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.2e-48 196.4 109 82.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.2e-48 196.4 106 81.1
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.2e-48 196.4 106 84.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 2.6e-48 195.3 105 83.8
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.4e-48 194.9 106 83.0
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 4.4e-48 194.5 108 80.6
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 9.9e-48 193.4 106 82.1
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.7e-47 192.6 105 81.0
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.8e-47 191.4 113 77.0
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 6.4e-47 190.7 106 80.2
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.4e-46 189.5 108 80.6
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.4e-46 188.7 106 80.2
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.4e-46 188.7 106 80.2
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.4e-46 188.7 106 83.0
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.2e-46 188.3 107 78.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 3.2e-46 188.3 105 79.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 5.4e-46 187.6 109 80.7
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 5.4e-46 187.6 111 79.3
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.4e-46 187.6 106 80.2
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 7.1e-46 187.2 108 78.7
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 7.1e-46 187.2 106 79.2
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 7.1e-46 187.2 106 80.2
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.5e-45 184.9 106 80.2
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.5e-45 184.9 101 84.2
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.6e-45 184.5 107 77.6
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.6e-45 184.5 106 78.3
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 6.0e-45 184.1 109 78.0
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 6.0e-45 184.1 106 78.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 6.0e-45 184.1 107 78.5
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.9e-45 183.7 105 75.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 7.9e-45 183.7 109 75.2
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.0e-44 183.3 106 74.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.0e-44 183.3 106 76.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.3e-44 183.0 105 80.0
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.7e-44 182.6 105 74.3
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.3e-44 182.2 106 79.2
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.3e-44 182.2 108 76.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.3e-44 182.2 109 73.4
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.3e-44 182.2 107 76.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.3e-44 182.2 109 76.1
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 3.0e-44 181.8 106 73.6
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 5.1e-44 181.0 105 73.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 6.6e-44 180.6 106 74.5
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.6e-44 180.6 106 77.4
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 8.7e-44 180.3 109 77.1
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.9e-43 179.1 106 77.4
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.3e-43 178.3 109 73.4
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 4.3e-43 177.9 106 75.5
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 5.6e-43 177.6 110 73.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 5.6e-43 177.6 112 73.2
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 7.3e-43 177.2 111 73.0
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.3e-43 177.2 106 78.3
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.3e-42 176.4 110 73.6
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.3e-42 176.4 110 73.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.1e-42 175.6 106 74.5
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.1e-42 175.6 106 74.5
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 4.8e-42 174.5 106 72.6
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.1e-41 173.3 103 73.8
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.4e-41 172.2 107 69.2
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.5e-40 169.5 90 86.7
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 4.5e-40 167.9 107 72.0
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 9.9e-40 166.8 111 71.2
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.9e-40 166.8 98 76.5
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.9e-40 166.8 98 76.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-39 166.4 110 69.1
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-39 166.4 110 69.1
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.3e-39 166.4 103 75.7
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.7e-39 166.0 110 69.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.2e-39 165.6 90 83.3
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.2e-39 165.6 110 69.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.9e-39 165.2 111 68.5
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.8e-39 164.9 110 68.2
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 6.4e-39 164.1 109 68.8
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.4e-39 164.1 111 68.5
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 6.4e-39 164.1 111 68.5
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.4e-39 164.1 111 68.5
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 8.4e-39 163.7 110 68.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 3.2e-38 161.8 110 68.2
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 4.2e-38 161.4 103 71.8
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 5.5e-38 161.0 107 68.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 7.1e-38 160.6 111 66.7
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 7.1e-38 160.6 111 66.7
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 7.1e-38 160.6 112 65.2
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.1e-37 159.1 104 72.1
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.7e-37 158.7 105 69.5
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.7e-37 158.7 105 68.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 6.0e-37 157.5 109 68.8
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 7.9e-37 157.1 105 66.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.3e-36 156.4 90 77.8
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.3e-36 156.4 90 77.8
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.9e-36 154.8 95 75.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 3.9e-36 154.8 95 75.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 3.9e-36 154.8 95 75.8
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 8.7e-36 153.7 106 65.1
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.5e-35 152.9 108 67.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.5e-35 152.1 86 77.9
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.1e-34 149.1 98 70.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.4e-33 145.6 106 61.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 6.9e-33 144.1 90 68.9
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 7.6e-32 140.6 104 61.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.8e-31 138.3 105 61.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 1.9e-30 136.0 90 68.9
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.3e-28 129.8 91 60.4
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.8e-28 129.4 99 53.5
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 3.0e-28 128.6 84 71.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.9e-28 128.3 88 62.5
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.9e-28 128.3 88 60.2
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 8.7e-28 127.1 104 54.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 4.3e-27 124.8 84 66.7
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.4e-25 119.8 78 62.8
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.8e-25 119.4 68 79.4
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.2e-24 116.7 90 63.3
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 6.5e-23 110.9 86 54.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.9e-22 109.4 63 76.2
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.3e-18 96.7 57 73.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.7e-15 86.3 73 57.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.6e-13 79.7 68 61.8
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 3.8e-07 58.5 36 72.2
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 1.9e-06 56.2 43 55.8


User provided reference genes

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