Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 2.3e-93 345.5 170 100.0
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.5e-76 289.7 172 84.3
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 4.4e-68 261.5 170 74.7
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.7e-67 259.6 170 75.3
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 3.7e-59 231.9 168 69.0
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 1.4e-58 229.9 166 69.3
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.4e-58 229.9 171 70.2
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 1.8e-58 229.6 167 67.7
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 2.0e-57 226.1 171 66.7
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.5e-57 224.9 169 68.0
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.0e-56 223.8 178 64.6
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 2.3e-56 222.6 176 67.6
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.2e-54 216.9 174 65.5
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 3.6e-54 215.3 175 66.9
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.8e-53 213.0 170 64.7
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 3.0e-53 212.2 175 63.4
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.4e-52 208.4 170 62.4
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 5.7e-52 208.0 170 61.8
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 7.5e-52 207.6 180 61.7
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 3.2e-50 202.2 173 60.1
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 2.0e-49 199.5 174 62.6
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.5e-49 198.7 174 62.6
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 7.8e-49 197.6 173 59.0
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.9e-48 195.3 174 58.0
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.9e-48 195.3 173 61.8
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.5e-47 192.6 174 58.6
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 4.3e-47 191.8 171 59.1
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 5.6e-47 191.4 172 59.3
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 7.3e-47 191.0 174 58.6
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 7.3e-47 191.0 167 58.1
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.6e-46 189.9 174 59.2
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.6e-46 189.9 167 55.7
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.8e-46 189.1 176 56.2
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 3.6e-46 188.7 163 58.9
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 3.6e-46 188.7 168 59.5
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 4.7e-46 188.3 170 60.6
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.2e-44 183.7 130 69.2
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.0e-44 183.0 171 56.7
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.6e-44 182.6 172 59.3
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 2.6e-44 182.6 169 59.2
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 3.4e-44 182.2 190 57.4
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 9.8e-44 180.6 150 58.7
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 9.8e-44 180.6 165 57.6
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.3e-43 180.3 132 70.5
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.3e-43 180.3 132 70.5
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.7e-43 179.9 173 57.2
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.2e-43 179.5 130 66.2
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.2e-43 179.5 125 68.8
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 2.9e-43 179.1 142 61.3
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 2.9e-43 179.1 133 61.7
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.7e-43 178.7 114 71.1
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 4.9e-43 178.3 164 57.9
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 4.9e-43 178.3 102 78.4
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 6.4e-43 177.9 158 57.6
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.4e-42 176.8 163 56.4
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 2.4e-42 176.0 158 56.3
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 5.4e-42 174.9 106 74.5
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.2e-41 173.7 176 57.4
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.6e-41 173.3 170 52.4
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 2.7e-41 172.6 173 57.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 6.0e-41 171.4 165 52.1
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.3e-40 169.5 167 51.5
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 3.9e-40 168.7 200 50.5
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 5.0e-40 168.3 106 71.7
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 8.6e-40 167.5 170 51.2
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 8.6e-40 167.5 197 48.7
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.5e-39 166.0 118 62.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 1.2e-38 163.7 167 49.7
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-38 163.7 167 49.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 1.2e-38 163.7 167 49.7
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 2.8e-38 162.5 126 57.9
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 2.8e-38 162.5 126 57.9
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 3.6e-38 162.2 170 48.8
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 6.2e-38 161.4 107 68.2
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 8.1e-38 161.0 94 78.7
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 1.4e-37 160.2 144 61.1
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 1.2e-36 157.1 170 50.6
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.5e-36 156.8 170 50.6
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 2.0e-36 156.4 116 62.1
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.4e-36 155.2 89 79.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 5.8e-36 154.8 172 48.8
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 5.8e-36 154.8 174 48.3
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 2.2e-35 152.9 100 69.0
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 4.9e-35 151.8 171 49.7
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 1.2e-33 147.1 170 50.0
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 2.7e-33 146.0 142 57.0
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 6.0e-33 144.8 99 69.7
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.3e-32 142.9 196 43.4
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 2.5e-31 139.4 99 63.6
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 2.5e-31 139.4 105 60.0
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 4.7e-30 135.2 94 61.7
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 8.1e-30 134.4 94 61.7
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.1e-29 134.0 136 50.7
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.3e-29 132.9 80 75.0
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 4.0e-29 132.1 96 67.7
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 6.8e-29 131.3 141 47.5
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 2.6e-28 129.4 122 47.5
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 2.4e-26 122.9 147 51.0
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.1e-25 119.8 100 65.0
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.2e-22 110.5 73 68.5
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 2.8e-22 109.4 98 53.1
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 6.9e-21 104.8 69 66.7
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 9.9e-20 100.9 109 54.1
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 3.5e-17 92.4 176 39.2
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 3.9e-16 89.0 96 56.2
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.1e-15 87.4 63 63.5
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 4.9e-11 72.0 39 82.1


User provided reference genes

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