Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G225700 Prunus persica HOM05D008934 ORTHO05D011063 1.2e-68 263.1 132 100.0
FvH4_2g21771 Fragaria vesca HOM05D008934 ORTHO05D011063 7.1e-42 174.1 139 70.5
FAN24G1664 Fragaria x ananassa HOM05D008934 ORTHO05D011063 4.6e-41 171.4 134 70.9
Dinv17352 Davidia involucrata HOM05D008934 ORTHO05D011063 1.4e-37 159.8 131 63.4
Gohir.A07G211700 Gossypium hirsutum HOM05D008934 ORTHO05D011063 1.2e-36 156.8 132 62.9
Potri.002G040300 Populus trichocarpa HOM05D008934 ORTHO05D011063 1.5e-36 156.4 131 59.5
Gorai.001G252000 Gossypium raimondii HOM05D008934 ORTHO05D011063 3.8e-35 151.8 132 60.6
Gohir.D07G217900 Gossypium hirsutum HOM05D008934 ORTHO05D011063 8.5e-35 150.6 132 60.6
COL.COLO4_05166 Corchorus olitorius HOM05D008934 ORTHO05D011063 9.3e-34 147.1 132 56.1
Aqoxy5G00256 Aquilegia oxysepala HOM05D008934 ORTHO05D011063 2.7e-33 145.6 134 58.2
Manes.13G032700 Manihot esculenta HOM05D008934 ORTHO05D011063 3.6e-33 145.2 133 59.4
Ciclev10024140m.g Citrus clementina HOM05D008934 ORTHO05D011063 1.0e-32 143.7 127 63.0
Hma1.2p1_0273F.1_g109860 Hydrangea macrophylla HOM05D008934 ORTHO05D011063 8.7e-32 140.6 131 60.3
Thecc.01G261000 Theobroma cacao HOM05D008934 ORTHO05D011063 9.7e-31 137.1 130 53.8
Lsat_1_v5_gn_9_8740 Lactuca sativa HOM05D002084 ORTHO05D002031 1.7e-30 136.3 132 56.8
Lj1g0015516 Lotus japonicus HOM05D008934 ORTHO05D011063 1.7e-30 136.3 130 56.2
TPR.G6884 Trifolium pratense HOM05D008934 ORTHO05D011063 2.2e-30 136.0 132 58.3
DCAR_005700 Daucus carota HOM05D008934 ORTHO05D011063 3.7e-30 135.2 131 58.0
Glyma.19G163400 Glycine max HOM05D008934 ORTHO05D011063 1.8e-29 132.9 133 53.4
Glyma.03G162000 Glycine max HOM05D008934 ORTHO05D011063 2.4e-29 132.5 134 53.0
QL09p038152 Quercus lobata HOM05D008934 ORTHO05D011063 4.5e-28 128.3 137 58.4
Actinidia37639 Actinidia chinensis HOM05D008934 ORTHO05D011063 1.3e-27 126.7 129 55.8
Medtr7g096660 Medicago truncatula HOM05D008934 ORTHO05D011063 5.0e-27 124.8 132 55.3
Psat3g058520 Pisum sativum HOM05D008934 ORTHO05D011063 6.5e-27 124.4 132 55.3
CAN.G977.1 Capsicum annuum HOM05D008934 ORTHO05D011063 8.5e-27 124.0 139 55.4
ClCG00G004100 Citrullus lanatus HOM05D008934 ORTHO05D011063 1.1e-26 123.6 132 53.8
ClCG07G000950 Citrullus lanatus HOM05D008934 ORTHO05D011063 1.1e-26 123.6 132 53.8
MSTRG.17484 Avicennia marina HOM05D008934 ORTHO05D011063 1.9e-26 122.9 144 47.9
Phvul.001G159800 Phaseolus vulgaris HOM05D008934 ORTHO05D011063 2.5e-26 122.5 130 51.5
VMungo1383G2686 Vigna mungo HOM05D008934 ORTHO05D011063 1.2e-25 120.2 126 52.4
Peaxi162Scf00134g00073 Petunia axillaris HOM05D008934 ORTHO05D011063 1.8e-24 116.3 84 71.4
CsaV3_3G022550 Cucumis sativus L. HOM05D008934 ORTHO05D011063 3.0e-24 115.5 134 52.2
Sed0020824 Sechium edule HOM05D008934 ORTHO05D011063 8.8e-24 114.0 132 53.8
Migut.N02196 Erythranthe guttata HOM05D008934 ORTHO05D011063 4.4e-23 111.7 149 43.0
DCAR_018472 Daucus carota HOM05D008934 ORTHO05D011063 2.2e-22 109.4 136 47.1
arahy.Tifrunner.gnm1.ann1.FL6YF2 Arachis hypogaea HOM05D008934 ORTHO05D011063 3.4e-20 102.1 156 43.6
Oeu025833.1 Olea europaea HOM05D008934 ORTHO05D011063 5.9e-20 101.3 146 44.5
SalBow6G6555 Salvia bowleyana HOM05D004750 ORTHO05D006207 6.5e-19 97.8 133 42.9
arahy.Tifrunner.gnm1.ann1.XZSU6S Arachis hypogaea HOM05D008934 ORTHO05D011063 8.0e-17 90.9 59 72.9
Cc01_g18460 Coffea canephora HOM05D008934 ORTHO05D011063 3.8e-11 72.0 114 43.9


User provided reference genes

Program Settings