Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 3.4e-261 904.4 447 100.0
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 2.5e-187 659.1 447 72.3
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 1.5e-179 633.3 445 69.4
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.0e-172 610.5 429 69.7
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.2e-171 605.1 429 69.2
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.9e-163 579.7 410 70.0
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.8e-161 573.2 416 68.3
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 1.9e-155 553.1 464 61.6
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 2.3e-145 519.6 461 59.0
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 2.3e-140 503.1 461 56.2
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 3.0e-140 502.7 458 55.5
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 6.6e-140 501.5 460 57.0
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 5.6e-139 498.4 467 55.9
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 1.2e-138 497.3 469 54.4
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 9.2e-134 481.1 467 55.0
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 1.3e-132 477.2 457 54.9
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 3.9e-132 475.7 458 53.5
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 3.9e-132 475.7 460 54.3
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.1e-130 469.9 458 52.8
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 4.0e-129 465.7 477 52.0
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 1.5e-128 463.8 477 52.8
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 3.8e-127 459.1 435 54.7
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 6.0e-125 451.8 464 51.5
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 1.7e-124 450.3 493 50.9
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 1.9e-123 446.8 497 50.3
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 1.0e-116 424.5 448 52.0
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 1.0e-116 424.5 453 47.9
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 2.5e-115 419.9 451 49.0
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 9.0e-113 411.4 470 48.9
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 5.6e-107 392.1 451 47.2
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 8.2e-106 388.3 359 57.4
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 6.9e-105 385.2 378 54.8
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 6.1e-101 372.1 447 46.1
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 6.7e-100 368.6 451 46.3
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 1.9e-99 367.1 454 45.4
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 4.8e-98 362.5 441 45.4
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 1.4e-97 360.9 466 45.3
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 3.4e-96 356.3 445 44.7
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 3.8e-95 352.8 461 44.9
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 3.8e-95 352.8 489 40.9
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 1.1e-94 351.3 451 43.9
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 2.7e-93 346.7 452 43.1
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 3.6e-93 346.3 458 42.4
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 1.0e-92 344.7 464 42.0
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 8.8e-92 341.7 448 42.6
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 3.3e-91 339.7 448 42.6
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 3.4e-88 329.7 440 43.9
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 5.9e-88 328.9 387 47.5
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 1.3e-87 327.8 448 42.0
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 1.3e-87 327.8 448 42.0
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 1.7e-87 327.4 447 41.2
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 9.4e-86 321.6 431 41.5
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 1.7e-82 310.8 329 51.7
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 6.3e-82 308.9 377 45.6
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 2.5e-78 297.0 447 39.6
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 3.2e-78 296.6 467 41.1
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 2.0e-75 287.3 253 62.1
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 3.3e-75 286.6 471 37.4
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 5.7e-75 285.8 450 40.7
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 1.8e-73 280.8 397 42.8
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 1.6e-72 277.7 215 60.0
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 2.0e-72 277.3 397 40.6
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 4.5e-72 276.2 402 41.5
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 3.8e-71 273.1 458 37.3
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 1.8e-68 264.2 461 36.2
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 1.4e-65 254.6 389 39.8
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 3.5e-64 250.0 384 39.3
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 1.8e-60 237.7 453 33.8
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 2.6e-59 233.8 288 45.5
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 8.3e-58 228.8 244 52.9
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 7.8e-48 195.7 236 46.2
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 2.3e-39 167.5 253 37.2
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 6.2e-37 159.5 289 34.6
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 3.2e-25 120.6 339 30.1
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 1.2e-24 118.6 93 61.3
Gohir.D11G218200 Gossypium hirsutum HOM05D007808 ORTHO05D009895 1.2e-24 118.6 159 42.1
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 2.2e-18 97.8 237 28.3
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 5.4e-17 93.2 443 23.0
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 7.1e-17 92.8 448 22.8
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.1e-16 91.3 53 71.7
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 2.3e-15 87.8 52 75.0
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 5.6e-14 83.2 59 59.3
SMO367G0912 Selaginella moellendorffii HOM05D007808 ORTHO05D009895 1.1e-06 58.9 251 23.1
BraA06t27623Z Brassica rapa HOM05D007808 ORTHO05D009895 3.3e-06 57.4 107 38.3


User provided reference genes

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