Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G212000 Prunus persica HOM05D000819 ORTHO05D336412 5.2e-78 294.3 144 100.0
Prupe.5G212700 Prunus persica HOM05D000819 ORTHO05D000661 2.0e-21 106.3 84 67.9
MD14G1218600 Malus domestica HOM05D000819 ORTHO05D000661 7.1e-19 97.8 84 60.7
MD06G1208200 Malus domestica HOM05D000819 ORTHO05D000661 6.6e-17 91.3 84 59.5
FAN13G0624 Fragaria x ananassa HOM05D000819 ORTHO05D000661 5.6e-16 88.2 84 53.6
CiPaw.16G081800 Carya illinoinensis HOM05D000819 ORTHO05D000661 1.4e-14 83.6 84 54.8
FvH4_5g13010 Fragaria vesca HOM05D000819 ORTHO05D000661 3.1e-14 82.4 84 51.2
Haze_18556 Corylus avellana HOM05D000819 ORTHO05D000661 4.0e-14 82.0 86 53.5
TWI81G1087 Tripterygium wilfordii HOM05D000819 ORTHO05D000661 5.3e-14 81.6 79 55.7
QL10p022014 Quercus lobata HOM05D000819 ORTHO05D000661 9.0e-14 80.9 86 51.2
Cfa019862 Carpinus fangiana HOM05D000819 ORTHO05D000661 1.2e-13 80.5 86 53.5
CANSAT80G0579 Cannabis sativa HOM05D000819 ORTHO05D000661 1.5e-13 80.1 87 48.3
PGR083G0703 Punica granatum HOM05D000819 ORTHO05D000661 2.6e-13 79.3 82 48.8
RcHm_v2.0_Chr7g0184171 Rosa chinensis HOM05D000819 ORTHO05D000661 3.4e-13 79.0 84 51.2
VMungo1309G0507 Vigna mungo HOM05D000819 ORTHO05D000661 4.5e-13 78.6 84 50.0
TAR629G0207 Trochodendron aralioides HOM05D000819 ORTHO05D000661 5.8e-13 78.2 81 51.9
Glyma.04G156900 Glycine max HOM05D000819 ORTHO05D000661 9.9e-13 77.4 84 48.8
Atru.chr9.667 Acer truncatum HOM05D000819 ORTHO05D000661 2.2e-12 76.3 86 51.2
Phvul.009G191000 Phaseolus vulgaris HOM05D000819 ORTHO05D000661 2.2e-12 76.3 84 47.6
GSVIVG01008196001 Vitis vinifera HOM05D000819 ORTHO05D000661 2.9e-12 75.9 84 48.8
Glyma.15G207700 Glycine max HOM05D000819 ORTHO05D000661 3.8e-12 75.5 84 47.6
Aqoxy3G03814 Aquilegia oxysepala HOM05D000819 ORTHO05D000661 4.9e-12 75.1 87 50.6
Psat1g028080 Pisum sativum HOM05D000819 ORTHO05D000661 4.9e-12 75.1 84 42.9
Ca_02685_v3 Cicer arietinum L. HOM05D000819 ORTHO05D000661 6.4e-12 74.7 84 46.4
Ciclev10021506m.g Citrus clementina HOM05D000819 ORTHO05D000661 6.4e-12 74.7 82 48.8
Medtr2g055320 Medicago truncatula HOM05D000819 ORTHO05D000661 6.4e-12 74.7 84 45.2
Medtr2g058330 Medicago truncatula HOM05D000819 ORTHO05D000661 6.4e-12 74.7 84 45.2
arahy.Tifrunner.gnm1.ann1.VNY0QE Arachis hypogaea HOM05D000819 ORTHO05D000661 2.4e-11 72.8 80 46.2
arahy.Tifrunner.gnm1.ann1.Y9A69F Arachis hypogaea HOM05D000819 ORTHO05D000661 3.2e-11 72.4 80 46.2
FAN18G2242 Fragaria x ananassa HOM05D000819 ORTHO05D000661 3.2e-11 72.4 137 33.6
Dinv38614 Davidia involucrata HOM05D000819 ORTHO05D000661 5.4e-11 71.6 80 48.8
Cpa.g.sc13.90 Carica papaya HOM05D000819 ORTHO05D000661 1.2e-10 70.5 90 50.0
Lj9C434T19 Lonicera japonica HOM05D000819 ORTHO05D000661 1.6e-10 70.1 80 46.2
Lj1g0024516 Lotus japonicus HOM05D000819 ORTHO05D000661 2.1e-10 69.7 91 46.2
Manes.01G023300 Manihot esculenta HOM05D000819 ORTHO05D000661 2.1e-10 69.7 79 49.4
Nitab4.5_0004342g0100 Nicotiana tabacum HOM05D000819 ORTHO05D000661 2.1e-10 69.7 85 44.7
CAN.G982.13 Capsicum annuum HOM05D000819 ORTHO05D000661 2.7e-10 69.3 85 45.9
Nitab4.5_0000646g0140 Nicotiana tabacum HOM05D000819 ORTHO05D000661 7.9e-10 67.8 85 44.7
Peaxi162Scf00017g03133 Petunia axillaris HOM05D000819 ORTHO05D000661 7.9e-10 67.8 85 44.7
Potri.015G055600 Populus trichocarpa HOM05D000819 ORTHO05D000661 1.0e-09 67.4 85 48.2
Rhsim11G0054200 Rhododendron simsii HOM05D000819 ORTHO05D000661 1.0e-09 67.4 80 43.8
VMungo1309G0805 Vigna mungo HOM05D000819 ORTHO05D000661 1.0e-09 67.4 79 45.6
Glyma.06G208100 Glycine max HOM05D000819 ORTHO05D000661 1.3e-09 67.0 86 44.2
Dinv36854 Davidia involucrata HOM05D000819 ORTHO05D000661 1.8e-09 66.6 80 46.2
Hund02538 Selenicereus undatus HOM05D000819 ORTHO05D000661 1.8e-09 66.6 84 39.3
TPR.G39596 Trifolium pratense HOM05D000819 ORTHO05D000661 1.8e-09 66.6 85 43.5
Sabra15G0080800 Salix brachista HOM05D000819 ORTHO05D000661 2.3e-09 66.2 85 48.2
Sed0016272 Sechium edule HOM05D000819 ORTHO05D000661 2.3e-09 66.2 82 46.3
MELO3C017267.2 Cucumis melo HOM05D000819 ORTHO05D000661 3.9e-09 65.5 81 45.7
vmacro17650 Vaccinium macrocarpon HOM05D000819 ORTHO05D000661 3.9e-09 65.5 96 41.7
ClCG06G015220 Citrullus lanatus HOM05D000819 ORTHO05D000661 6.7e-09 64.7 82 43.9
CsaV3_1G003120 Cucumis sativus L. HOM05D000819 ORTHO05D000661 6.7e-09 64.7 82 45.1
Eucgr.B00664 Eucalyptus grandis HOM05D000819 ORTHO05D000661 6.7e-09 64.7 81 43.2
Lalb_Chr08g0235221 Lupinus albus HOM05D000819 ORTHO05D000661 1.1e-08 63.9 82 42.7
CSS0019389 Camellia sinensis var. sinensis HOM05D000819 ORTHO05D000661 1.5e-08 63.5 79 43.0
Manes.05G116200 Manihot esculenta HOM05D000819 ORTHO05D000661 1.5e-08 63.5 80 47.5
Solyc03g114510.4 Solanum lycopersicum HOM05D000819 ORTHO05D000661 1.9e-08 63.2 85 42.4
PGSC0003DMG400024609 Solanum tuberosum HOM05D000819 ORTHO05D000661 4.3e-08 62.0 85 41.2
Sc04g0004060 Simmondsia chinensis HOM05D000819 ORTHO05D000661 5.6e-08 61.6 84 40.5
Potri.012G057400 Populus trichocarpa HOM05D000819 ORTHO05D000661 9.6e-08 60.8 80 47.5
Sopen03g033600 Solanum pennellii HOM05D000819 ORTHO05D000661 1.6e-07 60.1 85 41.2
Thecc.03G113400 Theobroma cacao HOM05D000819 ORTHO05D000661 2.1e-07 59.7 84 45.2
Cc04_g07850 Coffea canephora HOM05D000819 ORTHO05D000661 4.8e-07 58.5 77 41.6
AUR62008427 Chenopodium quinoa HOM05D000819 ORTHO05D000661 6.2e-07 58.2 85 38.8
Migut.D01485 Erythranthe guttata HOM05D000819 ORTHO05D000661 8.1e-07 57.8 82 39.0
Nn3g17621 Nelumbo nucifera HOM05D000819 ORTHO05D000661 8.1e-07 57.8 83 41.0
PSO063G5316 Papaver somniferum HOM05D000819 ORTHO05D000661 8.1e-07 57.8 85 42.4
PSO782G0001 Papaver somniferum HOM05D000819 ORTHO05D000661 8.1e-07 57.8 85 42.4
DCAR_023149 Daucus carota HOM05D000819 ORTHO05D000661 1.1e-06 57.4 84 38.1
Duzib068G0976 Durio zibethinus HOM05D000819 ORTHO05D000661 1.1e-06 57.4 84 44.0
Duzib205G1963 Durio zibethinus HOM05D000819 ORTHO05D000661 1.4e-06 57.0 78 47.4
Oeu031814.1 Olea europaea HOM05D000819 ORTHO05D000661 1.4e-06 57.0 77 40.3
QL10p022034 Quercus lobata HOM05D000819 ORTHO05D000661 1.4e-06 57.0 85 42.4
AT1G18490 Arabidopsis thaliana HOM05D000819 ORTHO05D000661 2.4e-06 56.2 81 40.7
MSTRG.4501 Avicennia marina HOM05D000819 ORTHO05D000661 2.4e-06 56.2 82 39.0
Thhalv10008420m.g Eutrema salsugineum HOM05D000819 ORTHO05D000661 2.4e-06 56.2 80 38.8
THA.LOC104812123 Tarenaya hassleriana HOM05D000819 ORTHO05D000661 2.4e-06 56.2 80 36.2
AL1G30930 Arabidopsis lyrata HOM05D000819 ORTHO05D000661 3.1e-06 55.8 81 39.5
BcaB07g31859 Brassica carinata HOM05D000819 ORTHO05D000661 3.1e-06 55.8 85 40.0
Gohir.A11G034700 Gossypium hirsutum HOM05D000819 ORTHO05D000661 3.1e-06 55.8 79 46.8
Gohir.D11G038200 Gossypium hirsutum HOM05D000819 ORTHO05D000661 3.1e-06 55.8 79 46.8
Gorai.007G040900 Gossypium raimondii HOM05D000819 ORTHO05D000661 3.1e-06 55.8 79 46.8
Carub.0001s1812 Capsella rubella HOM05D000819 ORTHO05D000661 5.3e-06 55.1 78 38.5
A06p14530 Brassica napus HOM05D000819 ORTHO05D000661 9.0e-06 54.3 78 38.5
BraA06t24579Z Brassica rapa HOM05D000819 ORTHO05D000661 9.0e-06 54.3 78 38.5


User provided reference genes

Program Settings