Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 1.5e-28 130.2 163 100.0
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.1e-20 104.0 58 86.2
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 2.9e-16 89.4 60 78.3
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 3.0e-13 79.3 61 75.4
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 3.9e-13 79.0 61 73.8
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 3.9e-13 79.0 61 73.8
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 5.0e-13 78.6 80 76.2
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 1.9e-12 76.6 61 70.5
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 1.9e-12 76.6 57 68.4
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 3.3e-12 75.9 61 72.1
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 4.3e-12 75.5 59 71.2
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 4.3e-12 75.5 58 75.9
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 5.6e-12 75.1 58 70.7
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 9.5e-12 74.3 57 66.7
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 9.5e-12 74.3 60 70.0
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 2.1e-11 73.2 81 54.3
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 3.6e-11 72.4 64 60.9
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 4.7e-11 72.0 60 65.0
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 8.0e-11 71.2 57 63.2
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 8.0e-11 71.2 61 73.8
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 2.3e-10 69.7 57 61.4
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 3.1e-10 69.3 75 54.7
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 4.0e-10 68.9 61 63.9
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 4.0e-10 68.9 67 55.2
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 6.8e-10 68.2 81 59.3
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 6.8e-10 68.2 61 70.5
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.5e-09 67.0 60 56.7
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 1.5e-09 67.0 57 64.9
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 2.6e-09 66.2 61 68.9
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.6e-09 66.2 55 63.6
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 3.4e-09 65.9 58 58.6
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 4.4e-09 65.5 60 65.0
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 4.4e-09 65.5 60 65.0
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 7.5e-09 64.7 73 53.4
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 7.5e-09 64.7 59 62.7
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 7.5e-09 64.7 71 53.5
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 7.5e-09 64.7 71 53.5
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.3e-08 63.9 57 54.4
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 1.7e-08 63.5 61 63.9
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 1.7e-08 63.5 52 69.2
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 1.7e-08 63.5 56 66.1
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 2.2e-08 63.2 57 59.6
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 2.2e-08 63.2 59 61.0
Sed0020523 Sechium edule HOM05D007427 ORTHO05D006413 2.2e-08 63.2 59 64.4
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 2.9e-08 62.8 59 62.7
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 3.7e-08 62.4 69 52.2
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 6.4e-08 61.6 63 55.6
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 8.3e-08 61.2 59 61.0
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.3e-08 61.2 55 61.8
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.3e-08 61.2 55 61.8
Gohir.D08G211500 Gossypium hirsutum HOM05D007427 ORTHO05D006413 8.3e-08 61.2 73 52.1
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 8.3e-08 61.2 55 61.8
Gorai.004G224800 Gossypium raimondii HOM05D007427 ORTHO05D006413 8.3e-08 61.2 73 52.1
Gohir.A08G193800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.1e-07 60.8 73 52.1
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.1e-07 60.8 58 60.3
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 1.1e-07 60.8 59 61.0
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 1.4e-07 60.5 60 60.0
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 1.9e-07 60.1 59 59.3
Nitab4.5_0000813g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 2.4e-07 59.7 51 64.7
Nn3g19877 Nelumbo nucifera HOM05D007427 ORTHO05D006413 3.2e-07 59.3 57 59.6
Nitab4.5_0001657g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 5.4e-07 58.5 51 64.7
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 7.1e-07 58.2 63 57.1
PGSC0003DMG400015809 Solanum tuberosum HOM05D014142 ORTHO05D006413 7.1e-07 58.2 51 62.7
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 9.2e-07 57.8 61 54.1
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 9.2e-07 57.8 56 57.1
Cc01_g17390 Coffea canephora HOM05D007427 ORTHO05D006413 1.6e-06 57.0 56 64.3
TAR362G1030 Trochodendron aralioides HOM05D007427 ORTHO05D006413 1.6e-06 57.0 64 54.7
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 2.1e-06 56.6 55 56.4
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 2.1e-06 56.6 52 57.7
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 2.1e-06 56.6 56 55.4
Gorai.001G183600 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.1e-06 56.6 66 51.5
Duzib138G1712 Durio zibethinus HOM05D007427 ORTHO05D006413 6.0e-06 55.1 43 69.8
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 7.8e-06 54.7 60 55.0
CsaV3_7G025680 Cucumis sativus L. HOM05D007427 ORTHO05D006413 7.8e-06 54.7 55 60.0


User provided reference genes

Program Settings