Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G195400 Prunus persica HOM05D008330 ORTHO05D010281 2.8e-74 282.0 150 100.0
Prupe.8G195200 Prunus persica HOM05D008330 ORTHO05D010281 5.4e-54 214.5 153 77.8
MD05G1166900 Malus domestica HOM05D008330 ORTHO05D010281 4.3e-51 204.9 153 77.1
FvH4_2g18250 Fragaria vesca HOM05D008330 ORTHO05D010281 1.5e-43 179.9 150 68.0
FAN15G3032 Fragaria x ananassa HOM05D008330 ORTHO05D010281 2.8e-42 175.6 150 67.3
RcHm_v2.0_Chr6g0283621 Rosa chinensis HOM05D008330 ORTHO05D010281 1.2e-40 170.2 150 66.0
FAN27G1390 Fragaria x ananassa HOM05D000599 ORTHO05D000554 2.6e-40 169.1 144 66.7
MD10G1156800 Malus domestica HOM05D008330 ORTHO05D010281 7.1e-38 161.0 122 69.7
RcHm_v2.0_Chr6g0283651 Rosa chinensis HOM05D008330 ORTHO05D010281 3.9e-36 155.2 150 60.7
Manes.13G051600 Manihot esculenta HOM05D008330 ORTHO05D010281 5.1e-36 154.8 150 55.3
Thecc.01G215900 Theobroma cacao HOM05D008330 ORTHO05D010281 6.7e-36 154.5 150 55.3
FvH4_2g18301 Fragaria vesca HOM05D008330 ORTHO05D010281 1.1e-35 153.7 150 58.0
Ciclev10032995m.g Citrus clementina HOM05D008330 ORTHO05D010281 1.5e-35 153.3 150 54.7
TAR633G1328 Trochodendron aralioides HOM05D008330 ORTHO05D010281 1.1e-33 147.1 150 54.0
Oeu064646.1 Olea europaea HOM05D008330 ORTHO05D010281 9.0e-33 144.1 148 54.1
Manes.12G050200 Manihot esculenta HOM05D008330 ORTHO05D010281 2.0e-32 142.9 150 52.7
Actinidia09458 Actinidia chinensis HOM05D000599 ORTHO05D010281 5.8e-32 141.4 144 53.5
CiPaw.13G049800 Carya illinoinensis HOM05D008330 ORTHO05D010281 5.8e-32 141.4 150 52.0
COL.COLO4_16118 Corchorus olitorius HOM05D008330 ORTHO05D010281 5.8e-32 141.4 150 50.0
TAR633G1148 Trochodendron aralioides HOM05D008330 ORTHO05D010281 5.8e-32 141.4 150 51.3
Duzib133G0427 Durio zibethinus HOM05D008330 ORTHO05D010281 3.8e-31 138.7 150 50.0
Gohir.A07G091600 Gossypium hirsutum HOM05D008330 ORTHO05D010281 2.4e-30 136.0 150 48.0
Atru.chr6.1449 Acer truncatum HOM05D008330 ORTHO05D010281 4.2e-30 135.2 150 48.0
Gohir.D07G096300 Gossypium hirsutum HOM05D008330 ORTHO05D010281 1.5e-27 126.7 150 46.0
Gorai.001G103600 Gossypium raimondii HOM05D008330 ORTHO05D010281 1.5e-27 126.7 150 46.0
Haze_03361 Corylus avellana HOM05D008330 ORTHO05D010281 1.9e-27 126.3 150 46.7
Potri.002G247600 Populus trichocarpa HOM05D008330 ORTHO05D010281 1.3e-26 123.6 151 45.7
vmacro02798 Vaccinium macrocarpon HOM05D000599 ORTHO05D000554 1.6e-26 123.2 145 50.3
Cpa.g.sc8.116 Carica papaya HOM05D001402 ORTHO05D001302 2.4e-25 119.4 135 46.7
Ah.08g214800 Amaranthus hybridus HOM05D008330 ORTHO05D010281 2.6e-24 115.9 150 40.7
Ca_07505_v3 Cicer arietinum L. HOM05D008330 ORTHO05D010281 4.5e-24 115.2 150 42.0
Sc05g0001880 Simmondsia chinensis HOM05D008330 ORTHO05D010281 4.5e-24 115.2 150 42.7
CiPaw.14G039500 Carya illinoinensis HOM05D008330 ORTHO05D010281 5.8e-24 114.8 151 46.4
Cfa010412 Carpinus fangiana HOM05D008330 ORTHO05D010281 1.0e-23 114.0 150 45.3
Sabra02G0188500 Salix brachista HOM05D001402 ORTHO05D001302 6.5e-23 111.3 143 44.8
TPR.G6400 Trifolium pratense HOM05D008330 ORTHO05D010281 1.0e-20 104.0 150 40.0
Migut.D02518 Erythranthe guttata HOM05D008330 ORTHO05D010281 6.7e-20 101.3 148 35.8
Nn1g08172 Nelumbo nucifera HOM05D008330 ORTHO05D010281 6.7e-20 101.3 150 43.3
TPR.G29159 Trifolium pratense HOM05D008330 ORTHO05D010281 1.1e-19 100.5 150 39.3
Lsat_1_v5_gn_8_89060 Lactuca sativa HOM05D008330 ORTHO05D010281 2.2e-18 96.3 149 37.6
AUR62001154 Chenopodium quinoa HOM05D008330 ORTHO05D010281 4.8e-18 95.1 150 36.0
ATR0561G155 Amborella trichopoda HOM05D008330 ORTHO05D010281 1.5e-16 90.1 146 34.9
MBI11_g07404_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D002274 2.6e-16 89.4 135 36.3
arahy.Tifrunner.gnm1.ann1.02NPIP Arachis hypogaea HOM05D008330 ORTHO05D010281 3.4e-16 89.0 148 37.8
Lj1g0017201 Lotus japonicus HOM05D008330 ORTHO05D010281 1.0e-15 87.4 150 37.3
arahy.Tifrunner.gnm1.ann1.P3ZVD3 Arachis hypogaea HOM05D008330 ORTHO05D010281 9.3e-14 80.9 148 34.5
Ah.08g214810 Amaranthus hybridus HOM05D008330 ORTHO05D010281 1.0e-12 77.4 152 32.9
Nn3g20084 Nelumbo nucifera HOM05D008330 ORTHO05D010281 1.0e-12 77.4 150 37.3
ECA236G1728 Erigeron canadensis HOM05D008330 ORTHO05D010281 1.4e-12 77.0 149 34.2
AL3G41070 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 1.8e-12 76.6 145 33.1
Sp3g22820 Schrenkiella parvula HOM05D014270 ORTHO05D010281 1.8e-12 76.6 148 33.1
BolC7t41540H Brassica oleracea HOM05D014270 ORTHO05D010281 2.3e-12 76.3 145 33.1
A07p07130 Brassica napus HOM05D014270 ORTHO05D010281 3.0e-12 75.9 145 33.1
C07p10740 Brassica napus HOM05D014270 ORTHO05D010281 3.9e-12 75.5 145 33.1
CARHR101550 Cardamine hirsuta HOM05D014270 ORTHO05D010281 5.1e-12 75.1 145 33.8
Carub.0003s2557 Capsella rubella HOM05D014270 ORTHO05D010281 6.7e-12 74.7 145 32.4
AL3G40920 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 1.1e-11 73.9 145 32.4
AUR62016522 Chenopodium quinoa HOM05D008330 ORTHO05D010281 1.9e-11 73.2 109 35.8
Rhsim01G0250700 Rhododendron simsii HOM05D000599 ORTHO05D000554 4.3e-11 72.0 113 41.6
Thhalv10002922m.g Eutrema salsugineum HOM05D014270 ORTHO05D010281 1.1e-09 67.4 145 31.7
Glyma.18G158600 Glycine max HOM05D008330 ORTHO05D010281 1.8e-09 66.6 148 29.7
Nn1g08173 Nelumbo nucifera HOM05D008330 ORTHO05D010281 2.4e-09 66.2 150 34.7
vmacro14718 Vaccinium macrocarpon HOM05D000599 ORTHO05D000554 3.1e-09 65.9 104 41.3
Medtr7g053580 Medicago truncatula HOM05D008330 ORTHO05D010281 6.9e-09 64.7 75 44.0
Nn1g08177 Nelumbo nucifera HOM05D008330 ORTHO05D010281 1.3e-07 60.5 153 31.4
Zm00001eb241320 Zea mays HOM05D008330 ORTHO05D443670 1.3e-07 60.5 144 28.5
Sopen09g020990 Solanum pennellii HOM05D008330 ORTHO05D010281 3.8e-07 58.9 119 34.5
TWI18G0253 Tripterygium wilfordii HOM05D008330 ORTHO05D010281 3.2e-06 55.8 150 28.7
PGSC0003DMG400008729 Solanum tuberosum HOM05D008330 ORTHO05D010281 5.5e-06 55.1 150 27.3


User provided reference genes

Program Settings