Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G194700 Prunus persica HOM05D009215 ORTHO05D010851 1.7e-37 158.7 74 100.0
Prupe.8G194500 Prunus persica HOM05D009215 ORTHO05D010851 2.4e-26 121.7 74 77.0
Prupe.8G194800 Prunus persica HOM05D009215 ORTHO05D010851 2.4e-26 121.7 74 77.0
FAN08G3126 Fragaria x ananassa HOM05D009215 ORTHO05D010851 6.0e-14 80.5 77 50.6
FvH4_5g26840 Fragaria vesca HOM05D009215 ORTHO05D010851 7.9e-14 80.1 77 49.4
FAN27G1007 Fragaria x ananassa HOM05D009215 ORTHO05D010851 3.9e-13 77.8 74 52.7
FAN15G1426 Fragaria x ananassa HOM05D009215 ORTHO05D010851 5.1e-13 77.4 74 52.7
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 2.5e-12 75.1 73 53.4
Duzib138G0384 Durio zibethinus HOM05D009215 ORTHO05D010851 9.6e-12 73.2 73 46.6
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 3.7e-11 71.2 73 50.7
COL.COLO4_16121 Corchorus olitorius HOM05D009215 ORTHO05D010851 4.8e-11 70.9 73 43.8
QL09p049452 Quercus lobata HOM05D009215 ORTHO05D010851 8.1e-11 70.1 74 51.4
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.0e-09 65.5 75 45.3
QL09p049422 Quercus lobata HOM05D009215 ORTHO05D010851 3.4e-09 64.7 74 48.6
QL09p049436 Quercus lobata HOM05D009215 ORTHO05D010851 3.4e-09 64.7 74 48.6
CiPaw.14G040500 Carya illinoinensis HOM05D009215 ORTHO05D010851 5.8e-09 63.9 73 45.2
FAN24G0268 Fragaria x ananassa HOM05D011949 ORTHO05D019137 1.3e-08 62.8 68 47.1
Gohir.D12G077402 Gossypium hirsutum HOM05D009215 ORTHO05D010851 1.3e-08 62.8 73 43.8
Gohir.A12G235600 Gossypium hirsutum HOM05D009215 ORTHO05D010851 2.2e-08 62.0 74 40.5
Manes.12G028500 Manihot esculenta HOM05D009215 ORTHO05D010851 2.9e-08 61.6 75 42.7
FAN04G0420 Fragaria x ananassa HOM05D009215 ORTHO05D010851 6.5e-08 60.5 68 44.1
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 8.4e-08 60.1 73 43.8
CiPaw.14G040800 Carya illinoinensis HOM05D009215 ORTHO05D010851 1.1e-07 59.7 73 43.8
QL09p049447 Quercus lobata HOM05D009215 ORTHO05D010851 1.1e-07 59.7 70 45.7
Cpa.g.sc8.114 Carica papaya HOM05D018895 ORTHO05D010851 1.4e-07 59.3 71 47.9
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 1.4e-07 59.3 73 43.8
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 1.9e-07 58.9 74 39.2
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 3.2e-07 58.2 72 44.4
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 4.2e-07 57.8 72 43.1
Haze_18679 Corylus avellana HOM05D016133 ORTHO05D010851 4.2e-07 57.8 73 42.5
Gorai.003G164100 Gossypium raimondii HOM05D009215 ORTHO05D010851 4.2e-07 57.8 74 39.2
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.5e-07 57.4 76 38.2
Haze_21639 Corylus avellana HOM05D016133 ORTHO05D010851 7.1e-07 57.0 72 41.7
Haze_21640 Corylus avellana HOM05D016133 ORTHO05D010851 7.1e-07 57.0 72 41.7
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.2e-06 56.2 76 36.8
Gohir.A03G148200 Gossypium hirsutum HOM05D009215 ORTHO05D010851 1.2e-06 56.2 75 41.3
Gorai.005G192700 Gossypium raimondii HOM05D009215 ORTHO05D010851 1.2e-06 56.2 74 39.2
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.6e-06 55.8 72 40.3
Haze_06031 Corylus avellana HOM05D016133 ORTHO05D010851 1.6e-06 55.8 72 41.7
Haze_18638 Corylus avellana HOM05D016133 ORTHO05D010851 1.6e-06 55.8 72 41.7
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.1e-06 55.5 72 40.3
Cpa.g.sc8.115 Carica papaya HOM05D009215 ORTHO05D010851 2.1e-06 55.5 73 42.5
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 4.6e-06 54.3 78 43.6
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 4.6e-06 54.3 73 43.8
Gohir.D12G236850 Gossypium hirsutum HOM05D009215 ORTHO05D010851 6.0e-06 53.9 74 39.2
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 7.9e-06 53.5 68 39.7
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 7.9e-06 53.5 74 37.8


User provided reference genes

Program Settings