Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 2.2e-117 425.6 209 100.0
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 8.5e-90 334.0 209 79.4
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 8.8e-87 323.9 210 78.1
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 1.2e-86 323.6 209 76.6
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 2.0e-86 322.8 209 77.0
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 8.3e-85 317.4 217 75.6
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 7.3e-73 277.7 212 67.9
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 9.5e-73 277.3 211 69.2
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 1.2e-72 276.9 214 66.4
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 2.8e-72 275.8 212 67.9
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 6.1e-72 274.6 212 67.5
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 1.0e-71 273.9 210 68.1
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 1.2e-70 270.4 215 64.7
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 1.5e-70 270.0 225 65.3
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.3e-69 266.9 236 63.1
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 4.9e-69 265.0 225 63.6
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 5.4e-68 261.5 235 62.6
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 5.4e-68 261.5 202 67.8
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 2.7e-67 259.2 195 67.2
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 2.7e-67 259.2 207 68.6
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 4.6e-67 258.5 199 68.3
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 7.8e-67 257.7 187 67.9
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 7.8e-67 257.7 207 67.1
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 7.8e-67 257.7 212 65.1
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.3e-66 256.9 211 63.5
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 1.3e-66 256.9 195 68.2
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 5.0e-66 255.0 215 66.0
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 1.1e-65 253.8 216 61.1
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 1.5e-65 253.4 189 67.7
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 1.5e-65 253.4 189 67.7
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 1.9e-65 253.1 189 67.7
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 1.9e-65 253.1 195 67.7
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 3.3e-65 252.3 232 56.9
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 5.6e-65 251.5 213 60.6
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 5.6e-65 251.5 207 63.3
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 7.3e-65 251.1 202 65.3
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 9.5e-65 250.8 196 66.8
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 9.5e-65 250.8 197 67.0
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 3.6e-64 248.8 209 63.6
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 4.7e-64 248.4 207 65.2
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 4.7e-64 248.4 201 66.2
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 1.1e-63 247.3 204 63.2
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 1.4e-63 246.9 199 64.8
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 2.3e-63 246.1 203 61.6
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 3.1e-63 245.7 214 64.5
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 4.0e-63 245.4 205 62.0
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 5.2e-63 245.0 208 59.6
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 5.2e-63 245.0 202 63.4
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 5.2e-63 245.0 199 63.8
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 5.2e-63 245.0 206 62.1
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 5.2e-63 245.0 190 66.3
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 8.9e-63 244.2 202 63.4
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 1.5e-62 243.4 202 62.9
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 2.0e-62 243.0 209 60.8
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 2.6e-62 242.7 206 63.1
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 3.4e-62 242.3 196 64.8
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 4.4e-62 241.9 206 63.1
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 7.5e-62 241.1 204 61.8
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 1.7e-61 240.0 207 59.9
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 2.2e-61 239.6 198 63.6
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 2.9e-61 239.2 206 60.7
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 3.7e-61 238.8 197 60.9
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 4.9e-61 238.4 197 63.5
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 1.1e-60 237.3 206 61.7
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 7.0e-60 234.6 207 60.4
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 9.2e-60 234.2 206 61.2
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 1.2e-59 233.8 199 60.8
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 2.1e-59 233.0 206 60.7
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 2.7e-59 232.6 198 61.6
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 1.7e-58 229.9 198 57.6
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 6.6e-58 228.0 215 57.7
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 8.6e-58 227.6 199 60.3
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 3.3e-57 225.7 199 58.3
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 1.2e-56 223.8 146 74.0
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 1.5e-54 216.9 150 70.0
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 1.5e-54 216.9 193 56.0
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 2.0e-54 216.5 198 58.6
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 4.1e-52 208.8 201 60.7
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 4.1e-52 208.8 173 61.8
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 9.2e-52 207.6 249 49.0
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.6e-51 206.8 198 56.1
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 4.6e-51 205.3 183 61.2
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 1.0e-50 204.1 168 62.5
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 2.5e-49 199.5 216 48.1
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 1.8e-47 193.4 147 67.3
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 3.1e-47 192.6 204 52.5
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 4.0e-47 192.2 139 69.1
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 1.5e-46 190.3 167 59.9
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 2.2e-45 186.4 138 64.5
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 3.5e-43 179.1 139 59.0
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.3e-42 177.2 148 63.5
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 1.3e-42 177.2 118 66.9
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.3e-40 170.6 273 39.2
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 6.2e-40 168.3 139 58.3
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 1.4e-39 167.2 122 71.3
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 7.6e-38 161.4 150 53.3
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 3.8e-37 159.1 124 68.5
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 1.9e-36 156.8 100 80.0
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 1.6e-35 153.7 128 60.2
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 1.3e-34 150.6 282 36.5
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 2.8e-32 142.9 162 48.8
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 1.5e-30 137.1 112 68.8
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 5.4e-28 128.6 107 59.8
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 4.3e-25 119.0 206 37.9
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 2.0e-22 110.2 88 56.8
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 2.5e-20 103.2 84 63.1
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 4.2e-20 102.4 77 70.1
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 9.3e-20 101.3 69 69.6
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 1.3e-18 97.4 106 41.5
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 3.1e-15 86.3 115 43.5
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 2.5e-12 76.6 64 59.4
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 8.2e-08 61.6 105 29.5
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 1.1e-07 61.2 105 29.5
Cre06.g273000 Chlamydomonas reinhardtii HOM05D002397 ORTHO05D002667 2.4e-07 60.1 110 32.7
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 2.4e-07 60.1 117 30.8
CANSAT35G0509 Cannabis sativa HOM05D002397 ORTHO05D002667 3.1e-07 59.7 106 33.0
CSS0046926 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 5.3e-07 58.9 104 30.8
SEGI_32624 Sequoiadendron giganteum HOM05D002397 ORTHO05D002667 5.3e-07 58.9 142 29.6
AL1G49390 Arabidopsis lyrata HOM05D002397 ORTHO05D002667 6.9e-07 58.5 101 32.7
CBR_g50359 Chara braunii HOM05D002397 ORTHO05D002667 6.9e-07 58.5 105 29.5
Thhalv10009998m.g Eutrema salsugineum HOM05D002397 ORTHO05D002667 6.9e-07 58.5 101 32.7
Lj2A349T11 Lonicera japonica HOM05D002397 ORTHO05D002667 9.0e-07 58.2 104 30.8
MD05G1250300 Malus domestica HOM05D002397 ORTHO05D002667 9.0e-07 58.2 109 28.4
Sc19g0007740 Simmondsia chinensis HOM05D002397 ORTHO05D002667 9.0e-07 58.2 163 25.2
CSS0030347 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 1.5e-06 57.4 104 31.7
HanXRQChr14g0447211 Helianthus annuus HOM05D002397 ORTHO05D002667 1.5e-06 57.4 109 33.0
MCO03G421 Micromonas commoda HOM05D002397 ORTHO05D002667 1.5e-06 57.4 107 28.0
Solyc02g068700.3 Solanum lycopersicum HOM05D002397 ORTHO05D002667 1.5e-06 57.4 109 31.2
Sopen02g017870 Solanum pennellii HOM05D002397 ORTHO05D002667 1.5e-06 57.4 109 31.2
THA.LOC104812704 Tarenaya hassleriana HOM05D002397 ORTHO05D002667 1.5e-06 57.4 101 32.7
EL10Ac3g07388 Beta vulgaris HOM05D002397 ORTHO05D002667 2.0e-06 57.0 156 25.0
CAN.G149.10 Capsicum annuum HOM05D002397 ORTHO05D002667 2.0e-06 57.0 109 30.3
Hund18476 Selenicereus undatus HOM05D007131 ORTHO05D009026 2.0e-06 57.0 131 35.1
Thecc.02G008600 Theobroma cacao HOM05D002397 ORTHO05D002667 2.0e-06 57.0 104 31.7
Carub.0001s2956 Capsella rubella HOM05D002397 ORTHO05D002667 2.6e-06 56.6 101 32.7
Nn7g38244 Nelumbo nucifera HOM05D002397 ORTHO05D002667 2.6e-06 56.6 101 31.7
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 2.6e-06 56.6 104 30.8
Nitab4.5_0001288g0140 Nicotiana tabacum HOM05D002397 ORTHO05D002667 3.4e-06 56.2 110 30.9
TPR.G38253 Trifolium pratense HOM05D002397 ORTHO05D002667 3.4e-06 56.2 104 28.8
Ah.04g149930 Amaranthus hybridus HOM05D002397 ORTHO05D002667 4.5e-06 55.8 132 28.0
CiPaw.09G076300 Carya illinoinensis HOM05D002397 ORTHO05D002667 4.5e-06 55.8 104 30.8
Glyma.15G161000 Glycine max HOM05D002397 ORTHO05D002667 4.5e-06 55.8 104 28.8
Mapoly0066s0117 Marchantia polymorpha HOM05D002397 ORTHO05D002667 4.5e-06 55.8 101 27.7
Cc00_g11370 Coffea canephora HOM05D002397 ORTHO05D002667 5.9e-06 55.5 101 32.7
COL.COLO4_17651 Corchorus olitorius HOM05D002397 ORTHO05D002667 5.9e-06 55.5 101 32.7
Potri.015G124700 Populus trichocarpa HOM05D002397 ORTHO05D002667 5.9e-06 55.5 129 26.4
vmacro03528 Vaccinium macrocarpon HOM05D002397 ORTHO05D002667 5.9e-06 55.5 101 30.7
Phvul.009G240300 Phaseolus vulgaris HOM05D002397 ORTHO05D002667 7.7e-06 55.1 104 28.8
PGR142G3425 Punica granatum HOM05D002397 ORTHO05D002667 7.7e-06 55.1 157 24.8
RcHm_v2.0_Chr3g0494981 Rosa chinensis HOM05D002397 ORTHO05D002667 7.7e-06 55.1 151 26.5
HPP92_004188 Vanilla planifolia HOM05D002397 ORTHO05D002667 7.7e-06 55.1 101 30.7
Ciclev10016837m.g Citrus clementina HOM05D002397 ORTHO05D002667 1.0e-05 54.7 111 31.5
Manes.16G056900 Manihot esculenta HOM05D002397 ORTHO05D002667 1.0e-05 54.7 127 26.8


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