Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 1.5e-83 312.8 159 100.0
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.0e-55 220.3 164 72.6
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 2.6e-54 215.7 163 72.4
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 8.6e-42 174.1 164 61.6
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.8e-39 166.4 164 59.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.0e-38 162.9 164 57.9
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.6e-35 153.3 152 57.9
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.3e-33 144.4 155 52.3
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 4.4e-30 135.2 165 48.5
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.4e-28 129.4 160 48.8
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.2e-28 129.0 151 50.3
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 4.1e-28 128.6 147 49.7
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 5.4e-28 128.3 155 54.8
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 5.4e-28 128.3 155 49.7
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 7.1e-28 127.9 167 49.7
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 9.2e-28 127.5 171 48.0
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 3.5e-27 125.6 173 49.7
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 6.0e-27 124.8 149 47.7
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.8e-27 124.4 160 51.2
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 7.8e-27 124.4 160 51.2
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.8e-27 124.4 168 49.4
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 7.8e-27 124.4 168 49.4
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 1.0e-26 124.0 150 49.3
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.3e-26 123.6 169 49.1
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.3e-26 122.9 168 48.8
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 2.3e-26 122.9 168 48.2
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 3.0e-26 122.5 171 48.5
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 3.0e-26 122.5 149 49.7
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 5.1e-26 121.7 152 46.7
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 5.1e-26 121.7 156 48.1
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 6.6e-26 121.3 156 48.1
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.5e-25 120.2 175 43.4
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.9e-25 119.8 171 44.4
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.5e-25 119.4 162 47.5
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.5e-25 119.4 162 49.4
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.2e-24 117.1 161 46.6
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.6e-24 116.7 175 42.3
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.1e-24 116.3 163 48.5
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 2.1e-24 116.3 157 45.2
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 2.8e-24 115.9 163 47.9
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.8e-24 115.9 159 47.2
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.8e-24 115.9 148 45.9
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 4.7e-24 115.2 157 47.8
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 1.1e-23 114.0 171 42.7
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.4e-23 113.6 149 47.0
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 1.4e-23 113.6 157 46.5
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.4e-23 112.8 139 50.4
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 5.2e-23 111.7 174 44.3
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 6.8e-23 111.3 153 43.8
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 6.8e-23 111.3 148 47.3
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 8.9e-23 110.9 147 47.6
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.2e-22 110.5 153 47.7
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 2.0e-22 109.8 157 43.3
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 2.0e-22 109.8 150 48.0
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 2.6e-22 109.4 165 46.1
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-22 109.4 142 43.7
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.6e-22 109.4 143 42.7
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 2.6e-22 109.4 149 47.0
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 3.4e-22 109.0 144 43.8
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 5.8e-22 108.2 119 48.7
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 5.8e-22 108.2 153 41.8
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 2.2e-21 106.3 159 43.4
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-21 106.3 142 42.3
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.9e-21 105.9 151 46.4
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 4.9e-21 105.1 159 40.9
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.4e-21 104.8 142 41.5
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.1e-20 104.0 151 43.7
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 1.9e-20 103.2 133 43.6
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.9e-20 103.2 120 50.0
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 1.9e-20 103.2 138 47.1
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 2.4e-20 102.8 166 42.2
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.2e-20 102.1 153 43.8
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 4.2e-20 102.1 149 47.0
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 5.4e-20 101.7 118 50.8
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 5.4e-20 101.7 139 49.6
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 5.4e-20 101.7 127 46.5
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 7.1e-20 101.3 175 37.1
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.3e-20 100.9 152 41.4
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.6e-19 100.1 158 39.2
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 3.5e-19 99.0 171 41.5
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 4.6e-19 98.6 152 41.4
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 6.0e-19 98.2 155 43.9
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.3e-18 97.1 152 44.7
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 1.3e-18 97.1 157 40.8
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 1.7e-18 96.7 149 38.9
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 3.0e-18 95.9 148 37.2
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 3.0e-18 95.9 169 37.9
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 5.1e-18 95.1 147 42.2
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 6.6e-18 94.7 149 40.3
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 8.7e-18 94.4 157 37.6
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.9e-17 93.2 170 38.8
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 3.3e-17 92.4 152 41.4
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 4.3e-17 92.0 147 38.8
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 5.6e-17 91.7 124 41.9
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 9.6e-17 90.9 117 45.3
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.6e-16 90.1 149 39.6
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 8.1e-16 87.8 156 37.2
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 4.0e-15 85.5 153 36.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.3e-15 85.1 103 44.7
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 6.9e-15 84.7 159 36.5
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 9.0e-15 84.3 100 45.0
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 1.2e-14 84.0 116 44.0
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.0e-14 83.2 148 39.2
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 2.0e-14 83.2 153 37.9
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 2.6e-14 82.8 144 38.9
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 5.8e-14 81.6 142 38.7
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 9.9e-14 80.9 130 41.5
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 9.9e-14 80.9 130 41.5
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 1.3e-13 80.5 103 41.7
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.7e-13 80.1 100 47.0
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 2.9e-13 79.3 95 45.3
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 2.9e-13 79.3 149 34.9
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 3.8e-13 79.0 141 37.6
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 3.8e-13 79.0 152 36.8
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 3.8e-13 79.0 150 38.7
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 4.9e-13 78.6 114 40.4
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 6.4e-13 78.2 148 34.5
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 1.1e-12 77.4 143 38.5
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 1.4e-12 77.0 136 36.8
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 3.2e-12 75.9 141 34.8
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 4.2e-12 75.5 149 40.9
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 4.2e-12 75.5 147 35.4
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.4e-12 75.1 149 40.9
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 7.1e-12 74.7 152 37.5
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 9.3e-12 74.3 97 48.5
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 9.3e-12 74.3 124 39.5
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 9.3e-12 74.3 155 36.1
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.2e-11 73.9 142 38.0
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 1.6e-11 73.6 170 33.5
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 2.1e-11 73.2 91 45.1
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.5e-11 72.4 100 45.0
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 6.0e-11 71.6 149 34.9
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 6.0e-11 71.6 149 34.9
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 7.9e-11 71.2 126 38.9
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 7.9e-11 71.2 126 38.9
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 1.5e-09 67.0 141 34.8
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 9.6e-09 64.3 141 33.3
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 9.6e-09 64.3 141 33.3
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 3.6e-08 62.4 141 32.6
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 3.6e-08 62.4 141 32.6
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 4.8e-08 62.0 77 46.8
Zm00001eb432720 Zea mays HOM05D005211 ORTHO05D006148 6.2e-08 61.6 161 32.9
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 2.4e-07 59.7 122 35.2
BcaC02g07205 Brassica carinata HOM05D005211 ORTHO05D006148 4.0e-07 58.9 87 40.2
Dinv44235 Davidia involucrata HOM05D005211 ORTHO05D006148 4.5e-06 55.5 66 50.0
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 5.8e-06 55.1 191 28.3


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