Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 5.4e-141 504.2 238 100.0
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 8.8e-99 364.0 238 76.5
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 7.4e-98 360.9 240 77.5
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.1e-93 347.1 235 74.9
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.5e-93 345.9 235 73.2
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.4e-83 313.5 240 67.9
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 5.0e-78 295.0 232 64.2
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 3.6e-76 288.9 238 61.3
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 4.0e-75 285.4 239 57.7
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 4.4e-74 282.0 236 63.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 5.7e-74 281.6 234 62.4
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.7e-73 280.0 235 60.0
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 4.8e-73 278.5 237 59.9
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 1.8e-72 276.6 239 60.7
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 5.4e-72 275.0 239 58.2
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 7.0e-72 274.6 236 57.6
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 9.1e-72 274.2 234 59.8
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 9.1e-72 274.2 238 58.0
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 3.8e-70 268.9 238 57.1
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.1e-69 267.3 240 57.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.1e-69 267.3 232 58.2
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.9e-69 266.5 229 59.8
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 2.5e-69 266.2 237 57.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 3.3e-69 265.8 236 58.5
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 5.5e-69 265.0 238 57.1
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.2e-69 264.6 237 57.8
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.1e-68 263.1 236 57.2
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 6.1e-68 261.5 232 59.1
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 8.0e-68 261.2 231 56.3
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.8e-67 260.0 236 58.5
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.3e-67 259.6 243 56.0
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 2.3e-67 259.6 233 58.8
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 3.0e-67 259.2 235 58.3
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 4.0e-67 258.8 233 58.8
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 6.8e-67 258.1 230 58.7
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 8.9e-67 257.7 235 56.2
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.2e-66 257.3 234 55.6
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 9.8e-66 254.2 225 59.6
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 9.8e-66 254.2 229 55.0
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 1.3e-65 253.8 223 59.6
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 2.8e-65 252.7 232 57.3
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 3.7e-65 252.3 231 55.0
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.8e-64 250.0 234 55.6
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.8e-64 250.0 249 53.4
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 4.1e-64 248.8 233 56.7
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 4.1e-64 248.8 228 55.7
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 9.2e-64 247.7 233 54.5
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 5.9e-63 245.0 229 56.3
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.0e-62 244.2 227 56.4
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.7e-62 243.4 236 55.5
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 2.9e-62 242.7 230 56.1
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.8e-62 242.3 227 55.1
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 6.6e-62 241.5 225 56.4
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.9e-61 240.0 257 51.8
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 3.3e-61 239.2 231 56.3
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.3e-61 239.2 225 56.4
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 4.3e-61 238.8 224 55.4
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.6e-60 235.7 258 51.2
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 6.1e-60 235.0 224 54.9
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 6.1e-60 235.0 233 54.5
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.0e-59 234.2 226 54.9
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 4.0e-59 232.3 226 53.5
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.2e-59 231.9 240 49.6
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 6.8e-59 231.5 231 52.4
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.2e-58 230.7 235 48.5
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 7.5e-58 228.0 224 54.5
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 7.5e-58 228.0 235 51.5
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 9.8e-58 227.6 231 51.1
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 2.2e-57 226.5 232 50.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 8.3e-57 224.6 229 54.6
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.1e-56 224.2 234 49.1
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.4e-56 223.8 236 47.5
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.9e-56 223.4 171 64.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 3.2e-56 222.6 226 54.4
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.2e-55 220.7 226 50.0
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.6e-55 220.3 229 49.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 3.5e-55 219.2 229 53.7
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 3.5e-55 219.2 229 50.7
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 1.7e-54 216.9 196 58.2
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.7e-54 216.9 228 52.6
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 5.0e-54 215.3 225 48.9
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 2.5e-53 213.0 225 48.9
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.5e-53 213.0 228 50.0
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.2e-52 210.7 136 72.1
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.0e-51 205.7 185 58.9
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 6.4e-49 198.4 181 56.9
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 4.1e-48 195.7 221 49.3
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.2e-47 194.1 229 46.3
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 1.6e-44 183.7 270 43.3
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 8.1e-44 181.4 229 44.1
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.1e-43 181.0 184 52.7
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 3.7e-41 172.6 222 43.2
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 7.1e-40 168.3 136 67.6
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 5.6e-37 158.7 124 58.9
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.2e-36 157.5 170 50.6
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 5.8e-34 148.7 155 51.0
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 8.4e-33 144.8 113 67.3
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 2.4e-32 143.3 274 29.9
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 3.0e-30 136.3 194 39.2
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 2.8e-28 129.8 192 37.5
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 2.6e-26 123.2 133 51.1
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 6.9e-19 98.6 89 56.2
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 2.2e-17 93.6 156 41.0
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.9e-17 93.2 205 34.6
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.1e-16 91.3 62 69.4
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.2e-15 87.8 102 51.0
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.6e-15 87.4 104 40.4
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 2.7e-15 86.7 102 51.0
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.1e-12 77.0 108 41.7
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.5e-10 69.3 63 49.2
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 3.2e-08 63.2 114 36.0
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 3.5e-07 59.7 110 37.3
Haze_03378 Corylus avellana HOM05D007112 ORTHO05D008930 8.7e-06 55.1 33 72.7


User provided reference genes

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