Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G185700 Prunus persica HOM05D000092 ORTHO05D000042 2.9e-44 181.4 86 100.0
FvH4_2g36810 Fragaria vesca HOM05D000092 ORTHO05D000042 1.0e-17 93.2 77 61.0
FvH4_2g36802 Fragaria vesca HOM05D000092 ORTHO05D000042 1.4e-17 92.8 77 58.4
FAN27G1642 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-17 92.8 77 58.4
FvH4_2g36850 Fragaria vesca HOM05D000092 ORTHO05D000042 1.8e-17 92.4 77 57.1
FAN20G0799 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.8e-17 92.4 85 52.9
RcHm_v2.0_Chr6g0282051 Rosa chinensis HOM05D000092 ORTHO05D000042 2.3e-17 92.0 78 57.7
FvH4_2g36840 Fragaria vesca HOM05D000092 ORTHO05D000042 1.3e-15 86.3 73 54.8
RcHm_v2.0_Chr5g0061651 Rosa chinensis HOM05D000092 ORTHO05D000042 8.3e-15 83.6 75 54.7
FvH4_4g35200 Fragaria vesca HOM05D000092 ORTHO05D000042 1.1e-14 83.2 77 49.4
FAN14G3346 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-14 83.2 76 51.3
RcHm_v2.0_Chr5g0080761 Rosa chinensis HOM05D000092 ORTHO05D000042 3.1e-14 81.6 78 52.6
RcHm_v2.0_Chr6g0304941 Rosa chinensis HOM05D000092 ORTHO05D000042 1.2e-13 79.7 77 50.6
FAN14G1121 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.0e-12 74.3 67 50.7
FvH4_2g17380 Fragaria vesca HOM05D000092 ORTHO05D019581 6.6e-12 73.9 76 48.7
FAN14G3488 Fragaria x ananassa HOM05D002568 ORTHO05D002814 8.6e-12 73.6 73 46.6
FvH4_6g02712 Fragaria vesca HOM05D002568 ORTHO05D002814 1.6e-10 69.3 82 42.7
FvH4_6g02760 Fragaria vesca HOM05D000092 ORTHO05D000042 1.6e-10 69.3 66 47.0
FAN27G1790 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.1e-10 67.4 74 45.9
FAN14G3923 Fragaria x ananassa HOM05D001069 ORTHO05D001549 1.0e-09 66.6 59 54.2
FAN14G0413 Fragaria x ananassa HOM05D002568 ORTHO05D002814 2.3e-09 65.5 59 52.5
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-09 64.3 75 42.7
Gohir.A10G241400 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.8e-09 63.9 71 42.3
FAN15G1410 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.9e-09 63.5 77 42.9
Dinv24998 Davidia involucrata HOM05D000092 ORTHO05D016246 1.5e-08 62.8 71 42.3
Dinv25008 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-08 62.8 71 42.3
Dinv25018 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-08 62.8 78 42.3
Gohir.A10G241600 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.5e-08 62.8 71 40.8
Thecc.05G295100 Theobroma cacao HOM05D000092 ORTHO05D000042 2.0e-08 62.4 80 40.0
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 4.4e-08 61.2 75 41.3
FAN24G2975 Fragaria x ananassa HOM05D002568 ORTHO05D002814 5.7e-08 60.8 64 46.9
Thecc.01G193000 Theobroma cacao HOM05D000092 ORTHO05D000042 5.7e-08 60.8 58 48.3
Dinv25000 Davidia involucrata HOM05D000092 ORTHO05D000042 7.5e-08 60.5 68 41.2
Dinv25011 Davidia involucrata HOM05D000092 ORTHO05D000042 9.8e-08 60.1 54 50.0
Gohir.A10G241832 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.8e-08 60.1 71 38.0
Gorai.011G293900 Gossypium raimondii HOM05D000092 ORTHO05D000042 9.8e-08 60.1 77 41.6
COL.COLO4_32820 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.3e-07 59.7 77 40.3
Dinv25005 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-07 59.3 54 48.1
Gorai.011G294500 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.7e-07 59.3 71 39.4
Dinv24996 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-07 58.9 68 42.6
Duzib128G1314 Durio zibethinus HOM05D000092 ORTHO05D000042 2.8e-07 58.5 58 44.8
QL03p002023 Quercus lobata HOM05D000092 ORTHO05D000042 2.8e-07 58.5 81 39.5
Duzib177G0334 Durio zibethinus HOM05D000092 ORTHO05D000042 4.9e-07 57.8 74 40.5
Gohir.D10G232100 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.9e-07 57.8 71 38.0
Gohir.D10G253550 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.3e-07 57.4 77 40.3
Gohir.D10G253700 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.3e-07 57.4 71 36.6
Gorai.011G294700 Gossypium raimondii HOM05D000092 ORTHO05D000042 6.3e-07 57.4 71 38.0
Lj4C322T4 Lonicera japonica HOM05D000092 ORTHO05D000042 6.3e-07 57.4 79 38.0
Thecc.05G203000 Theobroma cacao HOM05D000092 ORTHO05D000042 6.3e-07 57.4 57 45.6
Dinv01141 Davidia involucrata HOM05D000092 ORTHO05D000042 8.3e-07 57.0 83 39.8
Gorai.011G264800 Gossypium raimondii HOM05D000092 ORTHO05D000042 8.3e-07 57.0 71 36.6
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 8.3e-07 57.0 66 42.4
Gorai.007G356300 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.1e-06 56.6 74 37.8
Gorai.011G265900 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.1e-06 56.6 71 36.6
Gorai.011G294800 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.1e-06 56.6 71 36.6
Lsat_1_v5_gn_9_38960 Lactuca sativa HOM05D000092 ORTHO05D000042 1.1e-06 56.6 73 41.1
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-06 56.6 51 52.9
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 1.1e-06 56.6 57 43.9
Gohir.D10G230200 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.4e-06 56.2 71 36.6
Gohir.D10G230651 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.4e-06 56.2 71 36.6
Thecc.05G225000 Theobroma cacao HOM05D000092 ORTHO05D000042 1.4e-06 56.2 56 44.6
Thecc.05G225500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.4e-06 56.2 63 38.1
Dinv36125 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-06 55.8 53 50.9
Duzib177G0107 Durio zibethinus HOM05D000092 ORTHO05D000042 1.8e-06 55.8 59 40.7
Glyma.15G247600 Glycine max HOM05D000092 ORTHO05D000042 1.8e-06 55.8 70 35.7
Gohir.A10G241440 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.8e-06 55.8 71 39.4
Gorai.011G263700 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.8e-06 55.8 71 36.6
Gorai.011G264500 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.8e-06 55.8 71 35.2
Gorai.011G294200 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.8e-06 55.8 71 36.6
Thecc.K0003900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.8e-06 55.8 46 52.2
ClCG02G016220 Citrullus lanatus HOM05D000092 ORTHO05D000042 2.4e-06 55.5 77 36.4
Gohir.D10G230800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.4e-06 55.5 71 36.6
Gohir.D10G231620 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.4e-06 55.5 71 36.6
Gohir.D11G325050 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.4e-06 55.5 74 37.8
Gorai.011G263200 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.4e-06 55.5 71 36.6
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 3.1e-06 55.1 80 40.0
Duzib177G0994 Durio zibethinus HOM05D000092 ORTHO05D000042 3.1e-06 55.1 62 37.1
Gorai.011G265100 Gossypium raimondii HOM05D000092 ORTHO05D000042 3.1e-06 55.1 76 35.5
Thecc.05G203100 Theobroma cacao HOM05D000092 ORTHO05D000042 3.1e-06 55.1 67 40.3
CiPaw.06G073300 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.1e-06 54.7 78 35.9
COL.COLO4_13536 Corchorus olitorius HOM05D000092 ORTHO05D000042 4.1e-06 54.7 44 50.0
Gohir.D11G325101 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.1e-06 54.7 74 35.1
Gorai.007G355900 Gossypium raimondii HOM05D000092 ORTHO05D000042 4.1e-06 54.7 74 36.5
Gorai.011G263900 Gossypium raimondii HOM05D000092 ORTHO05D000042 4.1e-06 54.7 71 36.6
QL03p001366 Quercus lobata HOM05D000092 ORTHO05D000042 4.1e-06 54.7 66 42.4
QL03p002643 Quercus lobata HOM05D000092 ORTHO05D000042 4.1e-06 54.7 66 40.9
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-06 54.3 75 38.7
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-06 54.3 64 40.6
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 5.4e-06 54.3 64 40.6
Gohir.A10G241480 Gossypium hirsutum HOM05D000092 ORTHO05D000042 5.4e-06 54.3 71 36.6
Gohir.D10G230726 Gossypium hirsutum HOM05D000092 ORTHO05D000042 5.4e-06 54.3 54 42.6
Phvul.006G045400 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.4e-06 54.3 74 33.8
Gorai.007G356000 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.0e-06 53.9 74 36.5
Thecc.05G297400 Theobroma cacao HOM05D000092 ORTHO05D000042 7.0e-06 53.9 80 37.5
Thecc.K0004300 Theobroma cacao HOM05D000092 ORTHO05D000042 7.0e-06 53.9 58 43.1
COL.COLO4_13577 Corchorus olitorius HOM05D000092 ORTHO05D000042 9.2e-06 53.5 79 36.7
Manes.07G060300 Manihot esculenta HOM05D000092 ORTHO05D000042 9.2e-06 53.5 51 49.0
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 9.2e-06 53.5 51 49.0
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 9.2e-06 53.5 51 49.0
Sed0000144 Sechium edule HOM05D000092 ORTHO05D000042 9.2e-06 53.5 77 33.8
Thecc.K0003600 Theobroma cacao HOM05D000092 ORTHO05D000042 9.2e-06 53.5 58 43.1


User provided reference genes

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