Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G174100 Prunus persica HOM05D005310 ORTHO05D006920 7.9e-94 347.1 169 100.0
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 1.6e-38 163.3 136 64.7
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 5.2e-37 158.3 136 61.8
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 5.2e-37 158.3 136 61.8
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 2.6e-36 156.0 136 60.3
Duzib192G0594 Durio zibethinus HOM05D005310 ORTHO05D006920 7.5e-36 154.5 136 58.8
Sed0028201 Sechium edule HOM05D005310 ORTHO05D006920 7.5e-36 154.5 140 59.3
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 9.8e-36 154.1 136 60.3
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 2.2e-35 152.9 136 59.6
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 6.3e-35 151.4 136 58.8
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 6.3e-35 151.4 136 58.1
CiPaw.09G137200 Carya illinoinensis HOM05D005310 ORTHO05D006920 1.1e-34 150.6 136 57.4
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 1.1e-34 150.6 136 56.6
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 1.1e-34 150.6 136 58.1
Thecc.06G165700 Theobroma cacao HOM05D005310 ORTHO05D006920 1.1e-34 150.6 140 56.4
Dinv32339 Davidia involucrata HOM05D005310 ORTHO05D006920 1.4e-34 150.2 136 58.1
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 1.8e-34 149.8 136 56.6
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 3.1e-34 149.1 136 58.1
Manes.16G042900 Manihot esculenta HOM05D005310 ORTHO05D006920 3.1e-34 149.1 136 58.8
VMungo0251G0247 Vigna mungo HOM05D005310 ORTHO05D006920 4.1e-34 148.7 136 57.4
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 4.1e-34 148.7 136 58.1
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 5.4e-34 148.3 136 56.6
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 5.4e-34 148.3 136 55.9
TWI53G0456 Tripterygium wilfordii HOM05D005310 ORTHO05D006920 5.4e-34 148.3 136 55.9
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 7.0e-34 147.9 136 56.6
Oeu040921.3 Olea europaea HOM05D005310 ORTHO05D006920 7.0e-34 147.9 136 58.1
AUR62039478 Chenopodium quinoa HOM05D005310 ORTHO05D006920 9.2e-34 147.5 136 57.4
Ca_17897_v3 Cicer arietinum L. HOM05D005310 ORTHO05D006920 9.2e-34 147.5 136 56.6
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 1.2e-33 147.1 136 56.6
Eucgr.E02785 Eucalyptus grandis HOM05D005310 ORTHO05D006920 1.2e-33 147.1 136 55.1
Migut.M01009 Erythranthe guttata HOM05D005310 ORTHO05D006920 1.6e-33 146.7 140 53.6
TPR.G6733 Trifolium pratense HOM05D005310 ORTHO05D006920 1.6e-33 146.7 136 56.6
Lj4g0024191 Lotus japonicus HOM05D005310 ORTHO05D006920 2.0e-33 146.4 136 56.6
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 2.7e-33 146.0 136 55.9
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 3.5e-33 145.6 136 55.9
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 3.5e-33 145.6 136 56.6
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 4.5e-33 145.2 136 56.6
Ciclev10018335m.g Citrus clementina HOM05D005310 ORTHO05D006920 7.8e-33 144.4 145 54.5
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 1.0e-32 144.1 136 53.7
Ah.14g086990 Amaranthus hybridus HOM05D005310 ORTHO05D006920 1.0e-32 144.1 136 56.6
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 1.0e-32 144.1 136 55.1
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 1.0e-32 144.1 136 54.4
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 1.3e-32 143.7 136 56.6
Cpa.g.sc7.109 Carica papaya HOM05D005310 ORTHO05D006920 1.3e-32 143.7 136 55.1
Phvul.002G241100 Phaseolus vulgaris HOM05D005310 ORTHO05D006920 1.3e-32 143.7 136 55.9
Sp7g17520 Schrenkiella parvula HOM05D005310 ORTHO05D006920 1.3e-32 143.7 136 54.4
unitig_0.g743 Utricularia gibba HOM05D005310 ORTHO05D006920 1.3e-32 143.7 136 54.4
Medtr8g087310 Medicago truncatula HOM05D005310 ORTHO05D006920 1.7e-32 143.3 136 54.4
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 2.3e-32 142.9 140 52.9
PSO210G5690 Papaver somniferum HOM05D005310 ORTHO05D006920 2.3e-32 142.9 136 55.1
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 2.9e-32 142.5 136 54.4
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 6.6e-32 141.4 136 56.6
Glyma.08G118400 Glycine max HOM05D005310 ORTHO05D006920 8.6e-32 141.0 136 55.9
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.1e-31 140.6 164 50.0
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 1.1e-31 140.6 164 50.0
AL7G35440 Arabidopsis lyrata HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.9
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.2
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.2
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.2
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.2
Carub.0007s2242 Capsella rubella HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 52.9
HPP92_004025 Vanilla planifolia HOM05D005310 ORTHO05D006920 1.5e-31 140.2 136 53.7
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.9e-31 139.8 136 55.1
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 1.9e-31 139.8 145 52.4
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.9e-31 139.8 136 55.9
CDE04G2110 Ceratophyllum demersum HOM05D005310 ORTHO05D006920 2.5e-31 139.4 136 54.4
HPP92_004012 Vanilla planifolia HOM05D005310 ORTHO05D006920 2.5e-31 139.4 136 53.7
Glyma.05G161000 Glycine max HOM05D005310 ORTHO05D006920 3.3e-31 139.0 137 55.5
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 4.3e-31 138.7 164 49.4
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 4.3e-31 138.7 136 53.7
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 5.6e-31 138.3 136 55.1
QL05p049965 Quercus lobata HOM05D005310 ORTHO05D006920 5.6e-31 138.3 136 55.9
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 5.6e-31 138.3 136 55.9
AT4G18810 Arabidopsis thaliana HOM05D005310 ORTHO05D006920 7.3e-31 137.9 136 51.5
Thhalv10024714m.g Eutrema salsugineum HOM05D005310 ORTHO05D006920 7.3e-31 137.9 136 51.5
Psat7g068720 Pisum sativum HOM05D005310 ORTHO05D006920 7.3e-31 137.9 136 54.4
THA.LOC104806167 Tarenaya hassleriana HOM05D005310 ORTHO05D006920 7.3e-31 137.9 136 51.5
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 1.6e-30 136.7 136 50.7
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 1.6e-30 136.7 136 55.1
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 2.1e-30 136.3 136 53.7
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 2.8e-30 136.0 136 52.9
Actinidia02744 Actinidia chinensis HOM05D005310 ORTHO05D006920 8.0e-30 134.4 148 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis HOM05D005310 ORTHO05D006920 1.4e-29 133.7 136 52.2
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 4.0e-29 132.1 136 50.0
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 4.0e-29 132.1 140 49.3
Prupe.6G055000 Prunus persica HOM05D005310 ORTHO05D006920 8.9e-29 131.0 70 91.4
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 1.2e-28 130.6 133 53.4
vmacro16023 Vaccinium macrocarpon HOM05D005310 ORTHO05D006920 1.5e-28 130.2 168 45.8
Lalb_Chr12g0204951 Lupinus albus HOM05D005310 ORTHO05D006920 2.6e-28 129.4 168 47.6
Mapoly0037s0097 Marchantia polymorpha HOM05D005310 ORTHO05D006920 6.0e-25 118.2 132 44.7
Lsat_1_v5_gn_1_110100 Lactuca sativa HOM05D005310 ORTHO05D006920 6.6e-24 114.8 136 48.5
SGA_v2.0_scaffold16G07714 Striga asiatica HOM05D005310 ORTHO05D006920 1.9e-23 113.2 136 48.5
Sabra04G0040500 Salix brachista HOM05D005310 ORTHO05D006920 1.6e-22 110.2 66 75.8
Actinidia07651 Actinidia chinensis HOM05D005310 ORTHO05D006920 2.8e-22 109.4 81 67.9
Prupe.7G223300 Prunus persica HOM05D005310 ORTHO05D006920 8.0e-22 107.8 107 56.1
arahy.Tifrunner.gnm1.ann1.NMJG4G Arachis hypogaea HOM05D005310 ORTHO05D006920 3.1e-21 105.9 112 51.8
RcHm_v2.0_Chr5g0061601 Rosa chinensis HOM05D005310 ORTHO05D006920 3.1e-21 105.9 109 53.2
DCAR_027984 Daucus carota HOM05D005310 ORTHO05D006920 4.0e-21 105.5 109 52.3
SalBow8G4237 Salvia bowleyana HOM05D005310 ORTHO05D006920 5.2e-21 105.1 126 47.6
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 8.9e-21 104.4 66 77.3
RcHm_v2.0_Chr5g0011641 Rosa chinensis HOM05D005310 ORTHO05D006920 1.2e-20 104.0 108 52.8
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 4.4e-20 102.1 104 52.9
Hund04397 Selenicereus undatus HOM05D005310 ORTHO05D006920 4.4e-20 102.1 109 51.4
Haze_05356 Corylus avellana HOM05D005310 ORTHO05D006920 2.9e-19 99.4 111 50.5
Haze_05354 Corylus avellana HOM05D005310 ORTHO05D006920 1.9e-18 96.7 95 53.7
Cc02_g15580 Coffea canephora HOM05D005310 ORTHO05D006920 1.2e-17 94.0 108 46.3
Cre05.g244800 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D006920 6.6e-16 88.2 134 38.8
TAR627G0081 Trochodendron aralioides HOM05D005310 ORTHO05D006920 1.1e-15 87.4 128 43.0
Haze_05378 Corylus avellana HOM05D005310 ORTHO05D006920 2.1e-14 83.2 85 51.8
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 5.2e-13 78.6 104 44.2
CBR_g48496 Chara braunii HOM05D005310 ORTHO05D006920 1.5e-12 77.0 128 36.7
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 2.0e-12 76.6 148 35.1
Prupe.3G259500 Prunus persica HOM05D005310 ORTHO05D006920 1.3e-11 73.9 38 92.1
RcHm_v2.0_Chr2g0109861 Rosa chinensis HOM05D005310 ORTHO05D006920 9.5e-07 57.8 30 86.7
RcHm_v2.0_Chr2g0109871 Rosa chinensis HOM05D005310 ORTHO05D006920 9.5e-07 57.8 50 58.0


User provided reference genes

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