Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G172200 Prunus persica HOM05D007671 ORTHO05D009777 4.8e-41 170.6 80 100.0
Prupe.2G226800 Prunus persica HOM05D007671 ORTHO05D009777 1.6e-33 145.6 77 87.0
Prupe.1G113700 Prunus persica HOM05D007671 ORTHO05D009777 4.5e-31 137.5 71 88.7
Prupe.1G136000 Prunus persica HOM05D007671 ORTHO05D009777 9.4e-29 129.8 72 81.9
Potri.004G202466 Populus trichocarpa HOM05D007671 ORTHO05D009777 4.6e-28 127.5 74 79.7
Potri.005G106800 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.0e-27 126.3 69 87.0
Potri.005G107066 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.0e-27 126.3 69 87.0
Potri.005G106600 Populus trichocarpa HOM05D007671 ORTHO05D009777 8.8e-27 123.2 69 85.5
Potri.005G106933 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.0e-26 122.1 68 83.8
Manes.11G047175 Manihot esculenta HOM05D007671 ORTHO05D009777 3.7e-25 117.9 69 78.3
Gohir.D02G057375 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.8e-25 117.5 72 76.4
Gorai.005G063700 Gossypium raimondii HOM05D007671 ORTHO05D009777 4.8e-25 117.5 73 75.3
Gorai.005G064600 Gossypium raimondii HOM05D007671 ORTHO05D009777 4.8e-25 117.5 73 75.3
Gorai.005G063500 Gossypium raimondii HOM05D007671 ORTHO05D009777 1.4e-24 115.9 69 78.3
Gohir.A11G237966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 4.1e-24 114.4 68 80.9
Prupe.1G117400 Prunus persica HOM05D007671 ORTHO05D009777 5.3e-24 114.0 61 83.6
Gohir.D02G056933 Gossypium hirsutum HOM05D007671 ORTHO05D009777 6.9e-24 113.6 68 79.4
CiPaw.01G168300 Carya illinoinensis HOM05D007671 ORTHO05D009777 9.1e-24 113.2 70 74.3
Prupe.1G098500 Prunus persica HOM05D007671 ORTHO05D009777 1.2e-23 112.8 61 83.6
Glyma.10G232100 Glycine max HOM05D007671 ORTHO05D009777 2.6e-23 111.7 64 81.2
Prupe.1G384200 Prunus persica HOM05D007671 ORTHO05D009777 2.6e-23 111.7 65 78.5
Manes.06G007051 Manihot esculenta HOM05D007671 ORTHO05D009777 1.3e-22 109.4 72 73.6
Gohir.A11G238032 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.0e-22 107.5 68 76.5
Gohir.1Z049332 Gossypium hirsutum HOM05D007671 ORTHO05D009777 5.5e-21 104.0 66 74.2
Manes.01G190050 Manihot esculenta HOM05D007671 ORTHO05D009777 2.1e-20 102.1 64 76.6
Prupe.2G064500 Prunus persica HOM05D007671 ORTHO05D009777 2.7e-20 101.7 55 87.3
Prupe.1G136200 Prunus persica HOM05D007671 ORTHO05D009777 1.0e-19 99.8 61 78.7
Manes.06G006950 Manihot esculenta HOM05D007671 ORTHO05D009777 5.1e-19 97.4 57 80.7
Migut.E00372 Erythranthe guttata HOM05D007671 ORTHO05D009777 6.7e-19 97.1 72 69.4
Gorai.007G266800 Gossypium raimondii HOM05D007671 ORTHO05D009777 8.8e-19 96.7 65 72.3
CiPaw.02G098900 Carya illinoinensis HOM05D007671 ORTHO05D009777 2.6e-18 95.1 65 73.8
Prupe.1G135800 Prunus persica HOM05D007671 ORTHO05D009777 5.7e-18 94.0 52 82.7
Thhalv10009901m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 9.7e-18 93.2 66 69.7
Migut.N01038 Erythranthe guttata HOM05D007671 ORTHO05D009777 1.7e-17 92.4 66 65.2
Manes.14G093601 Manihot esculenta HOM05D007671 ORTHO05D009777 1.7e-17 92.4 67 70.1
Prupe.1G232200 Prunus persica HOM05D007671 ORTHO05D009777 3.7e-17 91.3 55 80.0
Carub.0005s0319 Capsella rubella HOM05D007671 ORTHO05D009777 1.1e-16 89.7 66 66.7
Manes.01G151801 Manihot esculenta HOM05D007671 ORTHO05D009777 2.4e-16 88.6 51 84.3
CiPaw.08G017600 Carya illinoinensis HOM05D007671 ORTHO05D009777 5.3e-16 87.4 52 73.1
A06p47690 Brassica napus HOM05D007671 ORTHO05D009777 1.6e-15 85.9 64 68.8
Gohir.D02G057184 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.6e-15 85.1 51 82.4
Potri.008G047850 Populus trichocarpa HOM05D007671 ORTHO05D009777 1.7e-14 82.4 62 69.4
Prupe.1G136100 Prunus persica HOM05D007671 ORTHO05D009777 5.0e-14 80.9 49 79.6
Migut.N02115 Erythranthe guttata HOM05D007671 ORTHO05D009777 7.2e-13 77.0 53 75.5
Gohir.A02G052202 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.6e-12 75.9 57 66.7
Migut.N02391 Erythranthe guttata HOM05D007671 ORTHO05D009777 2.1e-12 75.5 69 59.4
Gohir.D08G256350 Gossypium hirsutum HOM05D007671 ORTHO05D009777 3.6e-12 74.7 37 94.6
Carub.0005s0180 Capsella rubella HOM05D007671 ORTHO05D009777 4.7e-12 74.3 59 61.0
FAN20G2582 Fragaria x ananassa HOM05D007671 ORTHO05D035424 4.7e-12 74.3 43 79.1
FAN24G3042 Fragaria x ananassa HOM05D007671 ORTHO05D009777 8.0e-12 73.6 41 87.8
Manes.06G038352 Manihot esculenta HOM05D007671 ORTHO05D009777 1.0e-11 73.2 64 62.5
Gohir.A08G235950 Gossypium hirsutum HOM05D007671 ORTHO05D009777 1.4e-11 72.8 36 94.4
Thhalv10006404m.g Eutrema salsugineum HOM05D007671 ORTHO05D009777 1.5e-10 69.3 75 57.3
C03p61310 Brassica napus HOM05D007671 ORTHO05D009777 2.0e-10 68.9 58 58.6
Mapoly0045s0139 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.3e-10 68.2 66 62.1
Aqoxy6G01862 Aquilegia oxysepala HOM05D007671 ORTHO05D009777 4.4e-10 67.8 45 75.6
Mapoly3284s0001 Marchantia polymorpha HOM05D007671 ORTHO05D009777 4.4e-10 67.8 45 80.0
Os08g0114150 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.4e-10 67.8 46 73.9
Pp3c12_8280 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.8e-09 65.1 73 57.5
Pp3c12_8281 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.8e-09 65.1 73 57.5
Pp3c12_8290 Physcomitrium patens HOM05D007671 ORTHO05D009777 2.8e-09 65.1 73 57.5
Potri.007G002300 Populus trichocarpa HOM05D007671 ORTHO05D009777 2.8e-09 65.1 41 68.3
Mapoly0124s0032 Marchantia polymorpha HOM05D007671 ORTHO05D009777 8.2e-09 63.5 70 55.7
Pp3c23_15500 Physcomitrium patens HOM05D007671 ORTHO05D009777 8.2e-09 63.5 42 81.0
PGSC0003DMG401028532 Solanum tuberosum HOM05D007671 ORTHO05D009777 8.2e-09 63.5 43 65.1
Os02g0158701 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.4e-08 62.8 36 69.4
SHI08305 Sapria himalayana HOM05D007671 ORTHO05D009777 1.4e-08 62.8 37 86.5
Mapoly0012s0007 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.8e-08 62.4 71 57.7
Mapoly0168s0020 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.8e-08 62.4 71 57.7
Os07g0685600 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.8e-08 62.4 36 69.4
Gohir.D02G056966 Gossypium hirsutum HOM05D007671 ORTHO05D009777 2.4e-08 62.0 36 80.6
Mapoly0170s0037 Marchantia polymorpha HOM05D007671 ORTHO05D009777 2.4e-08 62.0 47 68.1
Mapoly0010s0188 Marchantia polymorpha HOM05D007671 ORTHO05D009777 3.1e-08 61.6 40 80.0
Mapoly0047s0081 Marchantia polymorpha HOM05D007671 ORTHO05D009777 9.1e-08 60.1 41 75.6
Os02g0159850 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.2e-07 59.7 36 69.4
Mapoly0130s0018 Marchantia polymorpha HOM05D007671 ORTHO05D009777 1.6e-07 59.3 37 83.8
Os07g0595750 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.6e-07 59.3 36 69.4
Os02g0193933 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.5e-07 57.8 36 66.7
Os07g0661450 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 4.5e-07 57.8 36 66.7
EL10Ac5g10720 Beta vulgaris HOM05D007671 ORTHO05D009777 5.9e-07 57.4 29 75.9
Mapoly0025s0123 Marchantia polymorpha HOM05D007671 ORTHO05D009777 5.9e-07 57.4 34 85.3
Mapoly0041s0016 Marchantia polymorpha HOM05D007671 ORTHO05D009777 5.9e-07 57.4 46 65.2
Os02g0811650 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 1.7e-06 55.8 38 60.5
Os02g0808601 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.2e-06 55.5 41 56.1
Os02g0811501 Oryza sativa ssp. japonica HOM05D007671 ORTHO05D009777 2.9e-06 55.1 42 57.1
COL.COLO4_30378 Corchorus olitorius HOM05D007671 ORTHO05D009777 5.0e-06 54.3 35 65.7
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 8.5e-06 53.5 40 60.0


User provided reference genes

Program Settings