Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G162600 Prunus persica HOM05D002663 ORTHO05D002988 5.0e-34 147.1 70 100.0
Prupe.3G229100 Prunus persica HOM05D002663 ORTHO05D002988 2.2e-18 95.1 57 80.7
Prupe.8G250200 Prunus persica HOM05D002663 ORTHO05D002988 1.6e-16 89.0 47 89.4
FvH4_2g24450 Fragaria vesca HOM05D002663 ORTHO05D002988 1.1e-14 82.8 47 85.1
RcHm_v2.0_Chr6g0292291 Rosa chinensis HOM05D002663 ORTHO05D002988 1.5e-14 82.4 47 87.2
FAN20G1908 Fragaria x ananassa HOM05D002663 ORTHO05D002988 2.6e-14 81.6 47 83.0
FAN24G0935 Fragaria x ananassa HOM05D002663 ORTHO05D002988 2.6e-14 81.6 47 83.0
FAN15G3524 Fragaria x ananassa HOM05D002663 ORTHO05D002988 4.4e-14 80.9 47 83.0
Potri.015G042100 Populus trichocarpa HOM05D002663 ORTHO05D002988 5.7e-14 80.5 47 80.9
Ah.08g212770 Amaranthus hybridus HOM05D002663 ORTHO05D002988 9.7e-14 79.7 47 80.9
Cfa006059 Carpinus fangiana HOM05D002663 ORTHO05D002988 9.7e-14 79.7 47 80.9
Sabra15G0051000 Salix brachista HOM05D002663 ORTHO05D002988 1.7e-13 79.0 47 78.7
Sabra15G0054700 Salix brachista HOM05D002663 ORTHO05D002988 1.7e-13 79.0 47 78.7
Sabra15G0061200 Salix brachista HOM05D002663 ORTHO05D002988 1.7e-13 79.0 47 78.7
Haze_04793 Corylus avellana HOM05D002663 ORTHO05D002988 2.2e-13 78.6 47 80.9
FAN27G1532 Fragaria x ananassa HOM05D002663 ORTHO05D002988 2.2e-13 78.6 47 80.9
QL12p023424 Quercus lobata HOM05D002663 ORTHO05D002988 2.2e-13 78.6 47 80.9
TWI14G0131 Tripterygium wilfordii HOM05D002663 ORTHO05D002988 2.2e-13 78.6 47 78.7
arahy.Tifrunner.gnm1.ann1.IMR5XM Arachis hypogaea HOM05D002663 ORTHO05D002988 4.8e-13 77.4 47 78.7
arahy.Tifrunner.gnm1.ann1.JDYV4L Arachis hypogaea HOM05D002663 ORTHO05D002988 4.8e-13 77.4 47 78.7
Glyma.08G122600 Glycine max HOM05D002663 ORTHO05D002988 4.8e-13 77.4 47 80.9
TPR.G6748 Trifolium pratense HOM05D002663 ORTHO05D002988 4.8e-13 77.4 47 78.7
ClCG05G012270 Citrullus lanatus HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 78.7
Eucgr.K03423 Eucalyptus grandis HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 80.9
Lalb_Chr13g0295491 Lupinus albus HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 78.7
Solyc09g074310.3 Solanum lycopersicum HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 78.7
Sopen09g029140 Solanum pennellii HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 78.7
PGSC0003DMG400016854 Solanum tuberosum HOM05D002663 ORTHO05D002988 6.3e-13 77.0 47 78.7
MELO3C023740.2 Cucumis melo HOM05D002663 ORTHO05D002988 8.2e-13 76.6 47 78.7
CsaV3_3G020180 Cucumis sativus L. HOM05D002663 ORTHO05D002988 8.2e-13 76.6 47 78.7
Oeu001452.1 Olea europaea HOM05D002663 ORTHO05D002988 8.2e-13 76.6 47 78.7
Cpa.g.sc9.146 Carica papaya HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 76.6
Glyma.05G165200 Glycine max HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 80.9
Nitab4.5_0001651g0140 Nicotiana tabacum HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 76.6
Nitab4.5_0010231g0020 Nicotiana tabacum HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 76.6
SalBow2G2285 Salvia bowleyana HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 76.6
vmacro02520 Vaccinium macrocarpon HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 78.7
VMungo0251G0385 Vigna mungo HOM05D002663 ORTHO05D002988 1.1e-12 76.3 47 80.9
Actinidia00709 Actinidia chinensis HOM05D002663 ORTHO05D002988 1.4e-12 75.9 47 76.6
CAN.G806.1 Capsicum annuum HOM05D002663 ORTHO05D002988 1.4e-12 75.9 47 76.6
Manes.05G070100 Manihot esculenta HOM05D002663 ORTHO05D002988 1.4e-12 75.9 47 76.6
Hund05368 Selenicereus undatus HOM05D002663 ORTHO05D002988 1.4e-12 75.9 47 76.6
EL10Ac5g11662 Beta vulgaris HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 76.6
EL10Ac8g19575 Beta vulgaris HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 76.6
Cc01_g20040 Coffea canephora HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 78.7
Migut.N02124 Erythranthe guttata HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 76.6
Phvul.002G245400 Phaseolus vulgaris HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 80.9
TAR362G0766 Trochodendron aralioides HOM05D002663 ORTHO05D002988 1.8e-12 75.5 47 76.6
ATR0487G012 Amborella trichopoda HOM05D002663 ORTHO05D002988 2.4e-12 75.1 47 72.3
CSS0004482 Camellia sinensis var. sinensis HOM05D002663 ORTHO05D002988 2.4e-12 75.1 47 76.6
ECA248G0286 Erigeron canadensis HOM05D002663 ORTHO05D002988 2.4e-12 75.1 47 74.5
Lj1A40T82 Lonicera japonica HOM05D002663 ORTHO05D002988 2.4e-12 75.1 47 76.6
Gohir.A11G118800 Gossypium hirsutum HOM05D002663 ORTHO05D002988 3.1e-12 74.7 47 76.6
Hma1.2p1_1651F.1_g295770 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 3.1e-12 74.7 47 74.5
Lsat_1_v5_gn_5_189660 Lactuca sativa HOM05D002663 ORTHO05D002988 3.1e-12 74.7 47 76.6
Psat7g065720 Pisum sativum HOM05D002663 ORTHO05D002988 3.1e-12 74.7 47 78.7
Prupe.3G229200 Prunus persica HOM05D002663 ORTHO05D002988 3.1e-12 74.7 48 77.1
Atru.chr5.1301_Atru.chr5.1302 Acer truncatum HOM05D002663 ORTHO05D002988 4.1e-12 74.3 47 78.7
CANSAT25G2471 Cannabis sativa HOM05D002663 ORTHO05D002988 4.1e-12 74.3 47 76.6
MD11G1296300 Malus domestica HOM05D002663 ORTHO05D002988 4.1e-12 74.3 47 78.7
Medtr8g088160 Medicago truncatula HOM05D002663 ORTHO05D002988 4.1e-12 74.3 47 76.6
Ca_17862_v3 Cicer arietinum L. HOM05D002663 ORTHO05D002988 5.3e-12 73.9 47 76.6
HanXRQChr11g0334821 Helianthus annuus HOM05D002663 ORTHO05D002988 5.3e-12 73.9 47 74.5
Gorai.007G132600 Gossypium raimondii HOM05D002663 ORTHO05D002988 7.0e-12 73.6 47 74.5
Rhsim13G0018700 Rhododendron simsii HOM05D002663 ORTHO05D002988 7.0e-12 73.6 47 76.6
Sed0012646 Sechium edule HOM05D002663 ORTHO05D002988 7.0e-12 73.6 47 76.6
CDE05G0856 Ceratophyllum demersum HOM05D000039 ORTHO05D002988 9.1e-12 73.2 47 70.2
AUR62034595 Chenopodium quinoa HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 74.5
AUR62036674 Chenopodium quinoa HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 74.5
AUR62044300 Chenopodium quinoa HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 74.5
Dinv11283 Davidia involucrata HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 76.6
MBI19_g25933_MAGBIO Magnolia biondii HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 74.5
GSVIVG01011028001 Vitis vinifera HOM05D002663 ORTHO05D002988 9.1e-12 73.2 47 72.3
Peaxi162Scf00006g03625 Petunia axillaris HOM05D002663 ORTHO05D002988 1.2e-11 72.8 47 74.5
PGR044G1923 Punica granatum HOM05D002663 ORTHO05D002988 1.2e-11 72.8 47 74.5
Thecc.01G288300 Theobroma cacao HOM05D002663 ORTHO05D002988 1.2e-11 72.8 47 74.5
HPP92_011329 Vanilla planifolia HOM05D002663 ORTHO05D002988 1.2e-11 72.8 47 74.5
DCAR_018373 Daucus carota HOM05D002663 ORTHO05D002988 2.0e-11 72.0 47 74.5
Lsat_1_v5_gn_4_167840 Lactuca sativa HOM05D002663 ORTHO05D002988 2.0e-11 72.0 47 74.5
Nn3g21225 Nelumbo nucifera HOM05D002663 ORTHO05D002988 2.6e-11 71.6 46 73.9
Sc24g0004050 Simmondsia chinensis HOM05D002663 ORTHO05D002988 4.5e-11 70.9 46 73.9
Lj4g0008753 Lotus japonicus HOM05D002663 ORTHO05D002988 1.0e-10 69.7 42 81.0
MD03G1274000 Malus domestica HOM05D002663 ORTHO05D002988 2.9e-10 68.2 47 74.5
SGA_v2.0_scaffold172G39055 Striga asiatica HOM05D002663 ORTHO05D002988 2.9e-10 68.2 51 68.6
Os11g0645200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 1.1e-09 66.2 47 68.1
SMO236G0130 Selaginella moellendorffii HOM05D002663 ORTHO05D002988 2.5e-09 65.1 46 69.6
unitig_744.g24628 Utricularia gibba HOM05D002663 ORTHO05D002988 2.5e-09 65.1 47 63.8
AagrBONN_evm.TU.Sc2ySwM_228.654 Anthoceros agrestis HOM05D002663 ORTHO05D002988 1.2e-08 62.8 47 66.0
Pp3c21_17600 Physcomitrium patens HOM05D002663 ORTHO05D002988 2.7e-08 61.6 47 59.6
CDE05G3163 Ceratophyllum demersum HOM05D002663 ORTHO05D002988 6.1e-08 60.5 37 75.7
CBR_g34010 Chara braunii HOM05D002663 ORTHO05D002988 3.0e-07 58.2 47 61.7
CBR_g410 Chara braunii HOM05D002663 ORTHO05D002988 5.2e-07 57.4 47 61.7
Mapoly0131s0005 Marchantia polymorpha HOM05D002663 ORTHO05D002988 6.7e-07 57.0 46 58.7
arahy.Tifrunner.gnm1.ann1.3DH906 Arachis hypogaea HOM05D002663 ORTHO05D002988 1.5e-06 55.8 46 54.3
arahy.Tifrunner.gnm1.ann1.93JRWW Arachis hypogaea HOM05D002663 ORTHO05D002988 1.5e-06 55.8 46 54.3
ATR0736G162 Amborella trichopoda HOM05D002663 ORTHO05D002988 2.0e-06 55.5 46 56.5
Cre03.g195050 Chlamydomonas reinhardtii HOM05D002663 ORTHO05D002988 2.0e-06 55.5 47 55.3
Os03g0611200 Oryza sativa ssp. japonica HOM05D002663 ORTHO05D002988 3.3e-06 54.7 46 52.2
EL10Ac3g05002 Beta vulgaris HOM05D002663 ORTHO05D002988 4.4e-06 54.3 46 52.2
Oeu011504.1 Olea europaea HOM05D002663 ORTHO05D002988 4.4e-06 54.3 46 54.3
Hma1.2p1_0992F.1_g245210 Hydrangea macrophylla HOM05D002663 ORTHO05D002988 5.7e-06 53.9 46 50.0
MBI07_g16927_MAGBIO Magnolia biondii HOM05D002663 ORTHO05D002988 5.7e-06 53.9 46 54.3
Lj6g0014805 Lotus japonicus HOM05D002663 ORTHO05D002988 7.5e-06 53.5 46 52.2
Sc13g0005480 Simmondsia chinensis HOM05D002663 ORTHO05D002988 9.7e-06 53.1 46 50.0
TAR362G0984 Trochodendron aralioides HOM05D002663 ORTHO05D002988 9.7e-06 53.1 46 52.2


User provided reference genes

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