Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 6.3e-199 697.2 342 100.0
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 1.6e-138 496.5 324 74.7
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 7.6e-136 487.6 321 73.5
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 1.7e-135 486.5 314 75.5
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 4.0e-129 465.3 334 68.3
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 3.4e-128 462.2 329 68.1
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 7.6e-128 461.1 342 68.1
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 1.7e-127 459.9 342 67.8
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 4.9e-127 458.4 324 69.8
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 2.4e-126 456.1 326 67.5
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 9.3e-126 454.1 331 68.6
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 1.5e-123 446.8 326 67.2
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 1.5e-123 446.8 323 67.5
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 1.9e-123 446.4 323 67.5
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 7.3e-123 444.5 342 67.8
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 2.4e-121 439.5 297 72.7
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 2.4e-121 439.5 304 69.7
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 5.8e-120 434.9 313 67.7
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 1.7e-119 433.3 319 67.1
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 2.2e-119 433.0 305 69.2
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 1.3e-116 423.7 306 67.3
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 1.3e-114 417.2 271 74.2
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 2.8e-114 416.0 290 69.0
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 6.2e-114 414.8 300 69.7
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 1.5e-112 410.2 295 67.8
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 9.3e-110 401.0 297 66.7
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 5.1e-108 395.2 286 65.0
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 3.4e-104 382.5 362 58.6
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.4e-102 377.1 246 75.2
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 8.2e-98 361.3 243 71.2
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 2.0e-96 356.7 313 58.8
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.2e-95 353.2 258 68.6
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 5.9e-88 328.6 282 56.7
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 2.9e-87 326.2 281 58.0
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 1.9e-86 323.6 287 54.7
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 3.9e-84 315.8 288 55.9
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 4.8e-82 308.9 310 51.0
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 1.6e-77 293.9 287 51.9
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.7e-76 288.5 233 63.9
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 5.7e-75 285.4 224 65.2
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 1.8e-57 227.3 169 62.7
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 9.1e-57 224.9 145 73.8
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 6.8e-52 208.8 254 45.7
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 5.7e-51 205.7 150 70.0
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 7.0e-49 198.7 186 55.4
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 2.7e-48 196.8 139 68.3
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 7.8e-48 195.3 166 57.2
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.6e-45 187.6 139 65.5
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.7e-40 170.2 205 50.2
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.9e-38 164.1 137 62.0
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 2.3e-36 157.1 148 56.1
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.7e-34 149.8 130 61.5
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 6.4e-34 149.1 127 63.0
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 6.0e-32 142.5 81 81.5
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 1.5e-30 137.9 96 70.8
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.7e-15 87.8 128 42.2
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 2.8e-13 80.5 62 66.1
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 2.1e-08 64.3 62 61.3


User provided reference genes

Program Settings