Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 9.9e-141 503.4 255 100.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 5.6e-136 487.6 255 96.1
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 1.2e-133 479.9 255 94.5
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 5.8e-133 477.6 250 96.0
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 7.6e-133 477.2 250 95.6
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.0e-129 466.8 250 93.2
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.0e-129 466.8 271 88.9
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 1.3e-127 459.9 254 90.2
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 1.3e-127 459.9 254 90.2
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 4.8e-127 458.0 253 89.3
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.1e-126 456.8 252 90.5
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.8e-126 456.1 252 90.1
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 6.9e-126 454.1 253 89.7
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 6.9e-126 454.1 253 89.7
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 6.9e-126 454.1 252 89.3
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 9.0e-126 453.8 250 90.4
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 5.8e-125 451.1 252 87.3
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.9e-124 448.7 254 90.6
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 6.5e-124 447.6 252 88.1
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 8.4e-124 447.2 252 86.5
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 8.4e-124 447.2 252 87.3
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.1e-123 446.8 250 88.0
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.1e-123 446.8 250 88.0
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.1e-123 446.8 252 88.1
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.4e-123 446.4 252 86.1
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.5e-123 445.7 252 87.3
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 2.5e-123 445.7 252 84.9
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 3.2e-123 445.3 255 85.9
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 4.2e-123 444.9 252 85.7
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.2e-123 444.9 250 86.4
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 5.5e-123 444.5 253 87.4
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.2e-122 443.4 252 84.9
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.2e-122 443.4 252 85.3
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 1.2e-122 443.4 252 86.1
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.6e-122 443.0 252 84.9
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 1.6e-122 443.0 252 85.3
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 1.6e-122 443.0 252 86.5
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.6e-122 443.0 253 86.6
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.1e-122 442.6 252 84.5
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 2.1e-122 442.6 252 84.9
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 2.7e-122 442.2 250 88.0
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 2.7e-122 442.2 255 85.5
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 3.5e-122 441.8 252 83.7
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 3.5e-122 441.8 257 87.2
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.0e-121 440.3 252 83.7
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 1.3e-121 439.9 250 87.6
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 2.3e-121 439.1 252 84.1
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 2.3e-121 439.1 250 85.6
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 3.9e-121 438.3 257 85.6
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 6.7e-121 437.6 254 89.4
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 8.7e-121 437.2 251 84.1
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.9e-120 436.0 257 84.8
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 2.5e-120 435.6 256 85.2
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.3e-120 435.3 250 86.4
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 5.7e-120 434.5 258 83.7
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 7.4e-120 434.1 253 84.6
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 2.2e-119 432.6 256 84.0
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 2.8e-119 432.2 249 85.5
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.1e-118 430.3 249 85.5
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.9e-118 427.6 279 78.5
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.2e-117 426.8 250 84.8
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 2.6e-117 425.6 251 83.7
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.6e-117 425.6 251 84.1
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 3.4e-117 425.2 255 84.3
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 3.4e-117 425.2 254 82.3
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 3.4e-117 425.2 251 83.7
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 4.5e-117 424.9 250 83.2
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 5.9e-117 424.5 255 81.6
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 7.7e-117 424.1 251 83.7
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 1.0e-116 423.7 255 83.9
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.0e-116 423.7 249 81.9
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 1.7e-116 422.9 262 82.1
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 2.2e-116 422.5 238 85.3
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 2.9e-116 422.2 249 82.7
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 3.8e-116 421.8 251 82.9
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 8.5e-116 420.6 249 81.9
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.2e-115 418.7 248 86.3
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 2.1e-114 416.0 293 73.0
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.4e-113 413.3 278 76.3
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.0e-112 409.5 250 86.0
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 2.5e-112 409.1 250 78.8
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.4e-110 403.3 225 85.8
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.4e-110 402.5 248 79.4
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 4.1e-110 401.7 250 77.6
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 5.9e-109 397.9 231 83.1
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 5.9e-109 397.9 231 83.1
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.0e-108 397.1 225 84.0
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 1.4e-107 393.3 250 75.6
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 4.7e-106 388.3 252 78.6
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 5.1e-105 384.8 254 75.6
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 7.4e-104 380.9 249 76.3
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 1.7e-103 379.8 254 76.4
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 3.7e-103 378.6 208 89.4
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.4e-102 376.7 222 81.5
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 5.3e-102 374.8 452 49.8
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 6.5e-100 367.9 249 70.7
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 1.9e-99 366.3 249 73.9
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.5e-99 364.8 219 84.0
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 3.6e-98 362.1 211 84.4
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 3.6e-98 362.1 282 72.0
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 8.0e-98 360.9 249 71.1
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.0e-97 360.5 254 76.0
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.0e-97 359.0 249 69.5
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 5.0e-92 341.7 251 70.1
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 3.6e-90 335.5 249 70.3
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 8.0e-90 334.3 208 77.9
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 1.0e-89 334.0 249 65.9
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 1.0e-89 334.0 193 83.4
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.8e-89 333.2 253 70.8
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 4.0e-89 332.0 236 69.5
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.3e-87 327.0 198 80.3
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 3.7e-87 325.5 241 70.5
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 8.0e-82 307.8 268 63.1
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 1.3e-79 300.4 205 77.1
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.2e-79 299.7 336 54.2
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 4.5e-77 292.0 249 60.6
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 5.9e-77 291.6 269 60.6
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.5e-75 287.0 250 64.4
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 9.8e-72 274.2 210 69.5
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 2.8e-71 272.7 160 81.2
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 9.2e-70 267.7 225 54.7
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.6e-69 266.9 207 66.2
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 5.9e-69 265.0 158 83.5
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 1.7e-68 263.5 286 54.5
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.4e-65 253.8 228 53.5
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.2e-65 251.9 142 90.1
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 6.8e-65 251.5 171 76.6
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 3.7e-63 245.7 228 53.9
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 3.3e-59 232.6 206 60.7
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 7.5e-56 221.5 182 63.7
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 2.7e-53 213.0 146 71.2
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 6.8e-49 198.4 113 84.1
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 6.0e-45 185.3 112 76.8
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 7.3e-43 178.3 132 73.5
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 6.0e-37 158.7 91 84.6
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 4.8e-34 149.1 93 78.5
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 4.8e-34 149.1 174 50.0
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.3e-31 141.0 250 42.4
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-29 132.5 102 66.7
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.6e-13 80.9 52 73.1


User provided reference genes

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