Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.0e-54 217.2 113 100.0
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.6e-47 192.6 121 86.0
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 4.6e-44 181.8 114 87.7
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 8.8e-43 177.6 113 82.3
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.2e-41 172.9 116 82.8
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.1e-40 170.6 167 62.3
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.1e-40 170.6 116 76.7
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 2.4e-40 169.5 115 80.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 4.1e-40 168.7 113 80.5
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.3e-40 168.3 114 80.7
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 6.9e-40 167.9 115 76.5
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 9.1e-40 167.5 113 79.6
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 9.1e-40 167.5 111 81.1
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.0e-39 166.4 113 79.6
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.0e-39 166.4 113 79.6
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.0e-39 166.4 113 79.6
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.9e-39 164.9 116 79.3
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 7.7e-39 164.5 113 77.9
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.3e-38 163.7 113 80.5
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.2e-38 162.9 111 79.3
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.2e-38 162.9 113 78.8
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 5.0e-38 161.8 114 78.1
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.0e-38 161.8 114 78.1
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 5.0e-38 161.8 114 78.1
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 5.0e-38 161.8 114 75.4
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 8.5e-38 161.0 113 77.0
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 8.5e-38 161.0 115 77.4
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.4e-37 160.2 114 77.2
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 1.4e-37 160.2 111 76.6
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 3.2e-37 159.1 117 76.9
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 5.5e-37 158.3 116 78.4
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 5.5e-37 158.3 116 78.4
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 9.4e-37 157.5 114 78.1
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 9.4e-37 157.5 104 79.8
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 9.4e-37 157.5 117 76.9
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 2.7e-36 156.0 114 77.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.7e-36 156.0 111 74.8
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 2.7e-36 156.0 116 77.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 3.6e-36 155.6 116 77.6
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 4.7e-36 155.2 114 73.7
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 6.1e-36 154.8 111 75.7
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 6.1e-36 154.8 104 81.7
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 7.9e-36 154.5 111 74.8
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.4e-35 153.7 124 70.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.8e-35 153.3 104 80.8
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.8e-35 153.3 121 71.9
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.0e-35 152.5 117 74.4
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 3.0e-35 152.5 122 73.8
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.9e-35 152.1 121 69.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 3.9e-35 152.1 117 74.4
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 5.1e-35 151.8 113 76.1
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.5e-34 150.2 117 70.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.0e-34 149.8 113 72.6
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.6e-34 149.4 118 70.3
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.6e-34 149.4 157 58.6
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.3e-34 149.1 114 73.7
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 5.7e-34 148.3 113 72.6
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 5.7e-34 148.3 118 71.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.7e-34 147.5 119 73.1
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.7e-33 146.7 118 70.3
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.7e-33 146.7 118 70.3
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.8e-33 146.0 121 69.4
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.7e-33 145.6 118 68.6
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 3.7e-33 145.6 118 70.3
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.7e-33 145.6 116 68.1
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 4.8e-33 145.2 107 73.8
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 8.2e-33 144.4 118 69.5
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 1.1e-32 144.1 104 75.0
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.8e-32 143.3 114 75.4
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 5.3e-32 141.7 112 68.8
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 5.3e-32 141.7 118 67.8
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 9.1e-32 141.0 112 68.8
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.6e-31 139.4 112 67.9
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.5e-31 138.7 120 64.2
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 4.5e-31 138.7 112 67.9
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 4.5e-31 138.7 103 69.9
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 7.7e-31 137.9 104 72.1
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.0e-30 137.5 113 68.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.0e-30 137.5 113 68.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.0e-30 137.5 113 68.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.0e-30 137.5 112 67.9
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.3e-30 137.1 113 67.3
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.3e-30 137.1 108 72.2
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.3e-30 137.1 109 71.6
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 2.2e-30 136.3 112 67.0
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.8e-30 135.6 113 67.3
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.0e-30 135.2 108 71.3
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 6.5e-30 134.8 107 70.1
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 6.5e-30 134.8 113 67.3
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.5e-30 134.8 108 70.4
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.5e-29 133.7 121 65.3
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.5e-29 133.7 116 68.1
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.5e-29 132.9 100 75.0
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.6e-28 129.0 115 65.2
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 4.7e-28 128.6 143 56.6
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 6.1e-28 128.3 116 65.5
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 6.1e-28 128.3 112 63.4
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 8.0e-28 127.9 117 65.0
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.0e-27 127.5 117 65.0
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.3e-27 126.3 167 50.3
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 3.0e-27 125.9 111 67.6
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 3.9e-27 125.6 114 64.9
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.1e-26 124.0 114 62.3
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.1e-26 124.0 114 62.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 3.3e-26 122.5 113 61.9
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 8.2e-25 117.9 105 60.0
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.1e-24 117.5 67 86.6
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.8e-24 116.7 98 66.3
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 2.4e-24 116.3 67 85.1
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.1e-24 115.9 119 58.0
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 3.1e-24 115.9 86 72.1
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 5.3e-24 115.2 64 90.6
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.0e-24 114.8 108 61.1
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 9.1e-24 114.4 104 61.5
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.0e-23 113.2 108 58.3
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.9e-23 111.7 118 58.5
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 6.5e-22 108.2 104 60.6
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.5e-21 107.1 113 58.4
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 7.2e-21 104.8 79 72.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 9.4e-21 104.4 83 72.3
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 3.6e-20 102.4 89 69.7
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.0e-19 99.4 137 46.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.0e-15 86.7 74 63.5
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-14 84.0 77 63.6
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 9.4e-13 77.8 90 53.3
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 2.3e-11 73.2 59 61.0
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 6.8e-11 71.6 58 67.2
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.6e-07 60.5 63 50.8
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 4.5e-07 58.9 52 59.6
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 8.6e-06 54.7 37 81.1


User provided reference genes

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