Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 2.8e-68 261.9 142 100.0
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.4e-56 223.0 142 85.9
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 6.9e-51 204.1 142 82.4
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.2e-47 193.4 143 78.3
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.4e-46 189.9 143 77.6
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.8e-43 179.5 142 69.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 5.9e-42 174.5 144 68.1
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.9e-41 172.2 144 67.4
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 5.0e-41 171.4 142 69.7
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 6.5e-41 171.0 144 70.1
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 8.5e-41 170.6 144 68.1
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 8.5e-41 170.6 144 66.7
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 8.5e-41 170.6 144 67.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.5e-40 169.1 142 64.1
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.2e-40 168.7 130 75.4
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 4.2e-40 168.3 140 68.6
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 9.4e-40 167.2 145 62.8
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.7e-39 165.6 143 65.0
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 4.7e-39 164.9 145 62.1
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.1e-39 164.5 145 62.8
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 7.9e-39 164.1 130 73.1
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.0e-38 163.7 144 64.6
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.4e-38 163.3 143 63.6
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.8e-38 162.9 144 64.6
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.0e-38 162.2 147 62.6
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 3.9e-38 161.8 117 75.2
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 5.2e-38 161.4 145 64.1
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 6.7e-38 161.0 145 66.2
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 6.7e-38 161.0 145 64.1
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 8.8e-38 160.6 142 68.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 8.8e-38 160.6 144 66.0
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.0e-37 159.5 141 66.0
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.6e-37 159.1 145 66.2
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.3e-37 158.7 145 65.5
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 3.3e-37 158.7 144 65.3
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 4.4e-37 158.3 136 67.6
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 4.4e-37 158.3 144 66.0
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 4.4e-37 158.3 144 63.9
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 4.4e-37 158.3 146 64.4
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 7.4e-37 157.5 115 69.6
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.4e-37 157.5 142 66.9
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.3e-36 156.8 136 66.9
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 3.7e-36 155.2 145 62.8
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.4e-35 153.3 146 61.6
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 3.1e-35 152.1 144 62.5
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 3.1e-35 152.1 144 63.9
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 5.3e-35 151.4 142 61.3
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.3e-35 151.4 143 61.5
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.3e-35 151.4 144 62.5
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 5.3e-35 151.4 144 63.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 7.0e-35 151.0 149 61.7
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 9.1e-35 150.6 146 63.7
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 9.1e-35 150.6 145 61.4
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 2.6e-34 149.1 145 62.1
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 5.9e-34 147.9 146 61.6
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 5.9e-34 147.9 145 62.8
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 7.7e-34 147.5 144 62.5
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 7.7e-34 147.5 144 61.1
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.0e-33 147.1 144 58.3
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.0e-33 147.1 141 61.7
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.0e-33 147.1 143 60.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.3e-33 146.7 144 62.5
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.8e-33 145.2 110 69.1
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 5.0e-33 144.8 143 58.7
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 8.5e-33 144.1 131 66.4
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 8.5e-33 144.1 144 61.1
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.5e-32 143.3 129 65.1
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 4.2e-32 141.7 132 62.9
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.5e-32 141.4 131 65.6
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.6e-31 139.8 146 60.3
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.1e-31 139.4 134 59.0
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.7e-31 139.0 147 60.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.6e-31 138.7 142 57.0
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.0e-30 137.1 144 60.4
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 4.0e-30 135.2 175 54.9
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.5e-29 133.3 162 52.5
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 1.5e-29 133.3 98 69.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.0e-29 132.9 93 75.3
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 7.5e-29 131.0 95 70.5
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.2e-28 129.4 148 54.7
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.8e-28 129.0 147 53.1
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.8e-28 129.0 82 80.5
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 4.8e-28 128.3 144 55.6
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 4.8e-28 128.3 148 56.1
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 8.2e-28 127.5 149 53.7
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.4e-27 125.9 148 55.4
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.4e-27 125.9 148 55.4
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 3.1e-27 125.6 149 52.3
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 5.3e-27 124.8 147 53.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.2e-26 123.6 148 54.7
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.2e-26 123.6 148 54.7
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.2e-26 123.6 153 52.3
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 1.6e-26 123.2 149 53.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.6e-26 123.2 143 54.5
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 3.5e-26 122.1 141 51.8
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.5e-26 121.7 109 68.8
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 5.9e-26 121.3 146 50.0
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.9e-24 116.3 149 49.7
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 3.2e-24 115.5 146 50.0
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 4.2e-24 115.2 131 55.7
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 7.2e-24 114.4 86 67.4
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 7.2e-24 114.4 117 58.1
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 2.7e-23 112.5 113 56.6
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.5e-21 104.4 130 50.8
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.3e-20 103.6 75 66.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 2.7e-18 95.9 124 50.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.5e-18 95.5 136 47.1
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 3.6e-15 85.5 83 54.2
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.2e-13 80.5 85 50.6
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 4.4e-13 78.6 122 48.4
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 7.5e-13 77.8 79 49.4
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.3e-12 77.0 122 36.9
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 2.8e-12 75.9 52 73.1
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.7e-12 75.5 73 56.2
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 4.1e-11 72.0 79 46.8
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.8e-06 56.6 52 55.8
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 8.9e-06 54.3 29 86.2


User provided reference genes

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