Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G119000 Prunus persica HOM05D018000 ORTHO05D017022 4.6e-55 217.6 108 100.0
Prupe.8G118100 Prunus persica HOM05D018000 ORTHO05D017022 6.5e-25 117.5 104 57.7
Prupe.8G118300 Prunus persica HOM05D033941 ORTHO05D017022 1.2e-18 96.7 142 43.0
Prupe.8G128400 Prunus persica HOM05D018000 ORTHO05D017022 6.5e-17 90.9 78 52.6
FvH4_5g14541 Fragaria vesca HOM05D018000 ORTHO05D017022 2.6e-13 79.0 100 44.0
FAN08G1263 Fragaria x ananassa HOM05D018000 ORTHO05D017022 5.7e-13 77.8 96 45.8
Prupe.8G118800 Prunus persica HOM05D033941 ORTHO05D017022 5.7e-13 77.8 102 40.2
FAN13G3187 Fragaria x ananassa HOM05D018000 ORTHO05D017022 7.4e-13 77.4 72 48.6
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-12 73.9 94 40.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-11 73.6 86 40.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-11 73.2 94 40.4
FAN18G0641 Fragaria x ananassa HOM05D018000 ORTHO05D017022 1.8e-11 72.8 96 43.8
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-11 72.4 98 36.7
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-11 72.4 98 36.7
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-11 72.4 91 38.5
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-11 72.4 105 37.1
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-11 72.0 94 40.4
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.3e-11 71.2 88 39.8
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.0e-11 70.9 102 39.2
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-10 70.1 89 38.2
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-10 70.1 95 30.5
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-10 69.7 94 39.4
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 4.5e-10 68.2 88 36.4
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 5.9e-10 67.8 94 36.2
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 5.9e-10 67.8 101 37.6
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-09 65.5 101 34.7
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 3.8e-09 65.1 100 37.0
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 5.0e-09 64.7 95 34.7
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.5e-09 64.3 92 38.0
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.5e-09 64.3 92 38.0
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 6.5e-09 64.3 95 32.6
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 6.5e-09 64.3 88 34.1
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 8.5e-09 63.9 100 33.0
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-08 63.5 95 31.6
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.5e-08 63.2 95 34.7
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-08 62.8 81 35.8
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-08 62.8 87 37.9
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-08 61.6 87 35.6
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-08 61.6 108 31.5
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 5.5e-08 61.2 100 34.0
Gorai.012G167700 Gossypium raimondii HOM05D002599 ORTHO05D012670 7.2e-08 60.8 95 33.7
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.2e-08 60.8 93 39.8
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.2e-08 60.8 104 30.8
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 9.4e-08 60.5 100 34.0
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-07 60.1 108 31.5
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 1.6e-07 59.7 100 34.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-07 59.7 104 30.8
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-07 58.9 89 33.7
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 2.7e-07 58.9 98 34.7
Gohir.A04G133251 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-07 58.5 99 33.3
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-07 58.5 83 36.1
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.7e-07 58.2 92 37.0
Gorai.012G168100 Gossypium raimondii HOM05D002599 ORTHO05D036187 4.7e-07 58.2 83 33.7
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 6.1e-07 57.8 104 30.8
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.0e-07 57.4 90 36.7
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.0e-07 57.4 90 36.7
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-06 57.0 106 30.2
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 1.0e-06 57.0 87 34.5
Gorai.012G168300 Gossypium raimondii HOM05D002599 ORTHO05D047846 1.4e-06 56.6 93 31.2
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-06 56.6 82 35.4
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-06 56.6 92 32.6
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-06 56.2 100 29.0
Gohir.A04G133401 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-06 55.8 99 32.3
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.3e-06 55.8 98 31.6
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-06 55.5 108 33.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-06 55.1 100 33.0
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.0e-06 55.1 108 33.3
Gohir.D04G176456 Gossypium hirsutum HOM05D002599 ORTHO05D036100 5.2e-06 54.7 95 31.6
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 5.2e-06 54.7 86 37.2


User provided reference genes

Program Settings