Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G113500 Prunus persica HOM05D000022 ORTHO05D335734 1.5e-56 222.6 112 100.0
Prupe.4G264700 Prunus persica HOM05D000022 ORTHO05D000306 4.8e-15 84.7 97 46.4
Prupe.7G024300 Prunus persica HOM05D000022 ORTHO05D000306 8.2e-15 84.0 104 42.3
Prupe.1G571900 Prunus persica HOM05D000022 ORTHO05D334140 1.9e-11 72.8 84 45.2
Medtr2g088980 Medicago truncatula HOM05D000022 ORTHO05D000306 5.7e-08 61.2 106 33.0
Sabra07G0097700 Salix brachista HOM05D000022 ORTHO05D000306 5.7e-08 61.2 107 34.6
Manes.16G013400 Manihot esculenta HOM05D000022 ORTHO05D000071 7.5e-08 60.8 104 32.7
arahy.Tifrunner.gnm1.ann1.8PXZ53 Arachis hypogaea HOM05D000022 ORTHO05D000306 9.8e-08 60.5 108 36.1
Migut.N00659 Erythranthe guttata HOM05D000022 ORTHO05D000306 9.8e-08 60.5 104 29.8
Rhsim07G0192500 Rhododendron simsii HOM05D000022 ORTHO05D000306 9.8e-08 60.5 105 32.4
Eucgr.A01728 Eucalyptus grandis HOM05D000022 ORTHO05D000306 1.7e-07 59.7 104 35.6
Sabra07G0097800 Salix brachista HOM05D000022 ORTHO05D000306 2.2e-07 59.3 104 34.6
Rhsim06G0157100 Rhododendron simsii HOM05D000022 ORTHO05D000306 2.8e-07 58.9 104 31.7
TAR626G1547 Trochodendron aralioides HOM05D000022 ORTHO05D000306 2.8e-07 58.9 104 33.7
AUR62001196 Chenopodium quinoa HOM05D000022 ORTHO05D000306 3.7e-07 58.5 104 33.7
Glyma.13G305800 Glycine max HOM05D000022 ORTHO05D000306 3.7e-07 58.5 106 33.0
Sabra07G0097900 Salix brachista HOM05D000022 ORTHO05D000306 3.7e-07 58.5 104 33.7
Atru.chr2.1055 Acer truncatum HOM05D000022 ORTHO05D000306 4.8e-07 58.2 105 32.4
Cfa010202 Carpinus fangiana HOM05D000022 ORTHO05D000306 6.3e-07 57.8 105 32.4
PSO017G0171 Papaver somniferum HOM05D000022 ORTHO05D000306 6.3e-07 57.8 89 36.0
Potri.007G120501 Populus trichocarpa HOM05D000022 ORTHO05D000306 6.3e-07 57.8 104 35.6
Phvul.005G112700 Phaseolus vulgaris HOM05D000022 ORTHO05D000306 8.3e-07 57.4 102 33.3
RhsimUnG0023600 Rhododendron simsii HOM05D000022 ORTHO05D000306 8.3e-07 57.4 105 32.4
RhsimUnG0184500 Rhododendron simsii HOM05D000022 ORTHO05D000306 8.3e-07 57.4 105 32.4
CSS0016669 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 1.4e-06 56.6 104 29.8
AUR62022132 Chenopodium quinoa HOM05D000022 ORTHO05D000306 1.4e-06 56.6 104 31.7
Dinv10917 Davidia involucrata HOM05D000022 ORTHO05D000306 1.4e-06 56.6 101 33.7
PSO017G4875 Papaver somniferum HOM05D000022 ORTHO05D000306 1.4e-06 56.6 89 36.0
Prupe.5G040500 Prunus persica HOM05D000022 ORTHO05D000306 1.4e-06 56.6 107 34.6
SalBow6G6871 Salvia bowleyana HOM05D000022 ORTHO05D000306 1.4e-06 56.6 103 31.1
CSS0016519 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 1.8e-06 56.2 104 32.7
Hma1.2p1_0613F.1_g189320 Hydrangea macrophylla HOM05D000022 ORTHO05D000306 1.8e-06 56.2 104 30.8
Os03g0277700 Oryza sativa ssp. japonica HOM05D000022 ORTHO05D000306 1.8e-06 56.2 107 29.0
PSO675G4418 Papaver somniferum HOM05D000022 ORTHO05D000306 1.8e-06 56.2 89 34.8
Potri.007G120500 Populus trichocarpa HOM05D000022 ORTHO05D000306 1.8e-06 56.2 104 32.7
VMungo1080G0766 Vigna mungo HOM05D000022 ORTHO05D000306 1.8e-06 56.2 106 32.1
QL08p032480 Quercus lobata HOM05D000022 ORTHO05D000071 2.4e-06 55.8 73 37.0
Sc21g0001750 Simmondsia chinensis HOM05D000022 ORTHO05D000306 2.4e-06 55.8 106 32.1
Actinidia23364 Actinidia chinensis HOM05D000022 ORTHO05D000306 3.1e-06 55.5 104 29.8
Aqoxy1G03790 Aquilegia oxysepala HOM05D000022 ORTHO05D000306 3.1e-06 55.5 105 33.3
QL04p084467 Quercus lobata HOM05D000022 ORTHO05D000306 3.1e-06 55.5 104 32.7
QL04p084471 Quercus lobata HOM05D000022 ORTHO05D000306 3.1e-06 55.5 104 32.7
QL05p075508 Quercus lobata HOM05D000022 ORTHO05D000071 3.1e-06 55.5 73 35.6
QL04p084474 Quercus lobata HOM05D000022 ORTHO05D000306 4.1e-06 55.1 104 31.7
MSTRG.17974 Avicennia marina HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
Lalb_Chr22g0349621 Lupinus albus HOM05D000022 ORTHO05D000306 5.4e-06 54.7 106 31.1
Phvul.005G112800 Phaseolus vulgaris HOM05D000022 ORTHO05D000306 5.4e-06 54.7 106 33.0
Psat5g266320 Pisum sativum HOM05D000022 ORTHO05D000306 5.4e-06 54.7 84 34.5
Psat7g176080 Pisum sativum HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 27.9
Potri.007G120400 Populus trichocarpa HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
Potri.007G120401 Populus trichocarpa HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
QL04p084402 Quercus lobata HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
QL04p084449 Quercus lobata HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
Rhsim06G0157300 Rhododendron simsii HOM05D000022 ORTHO05D000306 5.4e-06 54.7 104 31.7
QL05p075815 Quercus lobata HOM05D000022 ORTHO05D000071 7.0e-06 54.3 91 31.9
QL05p076004 Quercus lobata HOM05D000022 ORTHO05D000071 7.0e-06 54.3 91 31.9
CiPaw.09G084600 Carya illinoinensis HOM05D000022 ORTHO05D000071 9.1e-06 53.9 99 34.3
MD05G1056000 Malus domestica HOM05D000022 ORTHO05D000306 9.1e-06 53.9 103 31.1
Prupe.3G131600 Prunus persica HOM05D000022 ORTHO05D335880 9.1e-06 53.9 64 46.9
RcHm_v2.0_Chr2g0158681 Rosa chinensis HOM05D000022 ORTHO05D000306 9.1e-06 53.9 104 32.7
PGSC0003DMG400013175 Solanum tuberosum HOM05D000022 ORTHO05D000306 9.1e-06 53.9 104 30.8


User provided reference genes

Program Settings