Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G111600 Prunus persica HOM05D008520 ORTHO05D009890 2.6e-37 158.3 84 100.0
Prupe.8G112200 Prunus persica HOM05D008520 ORTHO05D009890 2.6e-37 158.3 84 100.0
Prupe.8G112000 Prunus persica HOM05D008520 ORTHO05D009890 9.5e-32 139.8 85 91.8
Prupe.8G111400 Prunus persica HOM05D008520 ORTHO05D009890 4.7e-31 137.5 85 90.6
Prupe.8G110900 Prunus persica HOM05D008520 ORTHO05D009890 8.0e-31 136.7 85 88.2
Prupe.8G111800 Prunus persica HOM05D008520 ORTHO05D009890 1.8e-30 135.6 84 88.1
RcHm_v2.0_Chr6g0260831 Rosa chinensis HOM05D008520 ORTHO05D009890 7.6e-13 77.0 91 57.1
FAN24G0814 Fragaria x ananassa HOM05D008520 ORTHO05D009890 1.7e-12 75.9 92 56.5
FAN05G4777 Fragaria x ananassa HOM05D008520 ORTHO05D009890 2.2e-12 75.5 92 56.5
FAN15G0381 Fragaria x ananassa HOM05D008520 ORTHO05D009890 2.2e-12 75.5 92 56.5
FAN20G0555 Fragaria x ananassa HOM05D008520 ORTHO05D009890 2.2e-12 75.5 92 56.5
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 3.2e-11 71.6 84 56.0
FvH4_2g07390 Fragaria vesca HOM05D008520 ORTHO05D009890 1.2e-10 69.7 89 53.9
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 1.6e-10 69.3 85 55.3
Glyma.11G123300 Glycine max HOM05D008520 ORTHO05D009890 3.5e-10 68.2 84 47.6
Atru.chr5.2897 Acer truncatum HOM05D008520 ORTHO05D009890 4.6e-10 67.8 84 47.6
COL.COLO4_17779 Corchorus olitorius HOM05D008520 ORTHO05D009890 1.3e-09 66.2 84 47.6
Glyma.07G163300 Glycine max HOM05D008520 ORTHO05D009890 1.3e-09 66.2 82 52.4
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 8.7e-09 63.5 84 47.6
Glyma.12G048000 Glycine max HOM05D008520 ORTHO05D009890 8.7e-09 63.5 84 44.0
arahy.Tifrunner.gnm1.ann1.4L7A6H Arachis hypogaea HOM05D008520 ORTHO05D009890 1.1e-08 63.2 84 46.4
arahy.Tifrunner.gnm1.ann1.H0FE8D Arachis hypogaea HOM05D008520 ORTHO05D009890 1.1e-08 63.2 84 46.4
Eucgr.G00506 Eucalyptus grandis HOM05D012043 ORTHO05D009890 1.5e-08 62.8 84 46.4
Lalb_Chr01g0002971 Lupinus albus HOM05D008520 ORTHO05D009890 1.9e-08 62.4 84 48.8
Thecc.02G029000 Theobroma cacao HOM05D008520 ORTHO05D009890 2.5e-08 62.0 84 48.8
Haze_02458 Corylus avellana HOM05D008520 ORTHO05D009890 5.6e-08 60.8 82 52.4
Medtr1g034290 Medicago truncatula HOM05D008520 ORTHO05D009890 5.6e-08 60.8 82 50.0
Potri.004G148200 Populus trichocarpa HOM05D008520 ORTHO05D009890 9.6e-08 60.1 82 51.2
Lj2g0022497 Lotus japonicus HOM05D008520 ORTHO05D009890 1.2e-07 59.7 82 47.6
Atru.chr5.2895 Acer truncatum HOM05D008520 ORTHO05D009890 1.6e-07 59.3 84 44.0
Cfa004952 Carpinus fangiana HOM05D008520 ORTHO05D009890 2.1e-07 58.9 83 54.2
Ciclev10029754m.g Citrus clementina HOM05D008520 ORTHO05D009890 2.1e-07 58.9 82 46.3
QL11p039275 Quercus lobata HOM05D008520 ORTHO05D009890 2.1e-07 58.9 83 45.8
Glyma.20G008300 Glycine max HOM05D008520 ORTHO05D009890 3.6e-07 58.2 80 51.2
Potri.009G109300 Populus trichocarpa HOM05D008520 ORTHO05D009890 3.6e-07 58.2 84 47.6
Ca_12478_v3 Cicer arietinum L. HOM05D008520 ORTHO05D009890 4.7e-07 57.8 82 47.6
Phvul.003G011000 Phaseolus vulgaris HOM05D012043 ORTHO05D009890 4.7e-07 57.8 82 46.3
Manes.15G145900 Manihot esculenta HOM05D008520 ORTHO05D009890 6.2e-07 57.4 82 46.3
Medtr4g068560 Medicago truncatula HOM05D008520 ORTHO05D009890 6.2e-07 57.4 84 46.4
Eucgr.G01536 Eucalyptus grandis HOM05D012043 ORTHO05D009890 1.4e-06 56.2 84 41.7
Haze_02459 Corylus avellana HOM05D008520 ORTHO05D009890 1.8e-06 55.8 81 51.9
Eucgr.G00500 Eucalyptus grandis HOM05D012043 ORTHO05D009890 3.1e-06 55.1 82 43.9
Eucgr.G00503 Eucalyptus grandis HOM05D012043 ORTHO05D009890 3.1e-06 55.1 82 43.9
Medtr1g034270 Medicago truncatula HOM05D008520 ORTHO05D009890 3.1e-06 55.1 82 45.1
Eucgr.G01538 Eucalyptus grandis HOM05D012043 ORTHO05D009890 5.2e-06 54.3 82 43.9
Gohir.D01G172800 Gossypium hirsutum HOM05D008520 ORTHO05D009890 6.9e-06 53.9 85 47.1
Gorai.002G214400 Gossypium raimondii HOM05D008520 ORTHO05D009890 6.9e-06 53.9 85 47.1
A03p45660 Brassica napus HOM05D011423 ORTHO05D009890 9.0e-06 53.5 84 41.7
BraA03t13698Z Brassica rapa HOM05D011423 ORTHO05D009890 9.0e-06 53.5 84 41.7


User provided reference genes

Program Settings