Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G109600 Prunus persica HOM05D000005 ORTHO05D010497 3.4e-100 368.2 175 100.0
Prupe.8G110000 Prunus persica HOM05D000005 ORTHO05D010497 4.3e-18 95.5 183 36.1
RcHm_v2.0_Chr6g0262321 Rosa chinensis HOM05D000005 ORTHO05D010497 5.6e-18 95.1 155 42.6
FAN15G2039 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.8e-17 92.8 160 41.2
Prupe.2G045200 Prunus persica HOM05D000005 ORTHO05D000012 4.0e-16 89.0 174 34.5
Prupe.8G109000 Prunus persica HOM05D000005 ORTHO05D000012 4.0e-16 89.0 181 36.5
RcHm_v2.0_Chr5g0059461 Rosa chinensis HOM05D000005 ORTHO05D010497 5.2e-16 88.6 162 35.2
FAN08G1474 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.8e-16 88.2 148 35.8
FAN13G2425 Fragaria x ananassa HOM05D000005 ORTHO05D010497 2.6e-15 86.3 148 35.1
FAN08G0091 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.4e-15 85.9 148 35.1
FvH4_5g07310 Fragaria vesca HOM05D000005 ORTHO05D000012 4.4e-15 85.5 151 36.4
FAN04G2061 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.4e-15 85.5 151 35.8
FAN08G0595 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.9e-15 84.3 151 35.8
FAN08G0727 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-14 84.0 150 36.7
FAN08G1537 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-14 83.6 150 34.0
FAN11G1260 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.2e-14 83.2 150 37.3
FAN13G3013 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-14 82.8 151 35.8
Prupe.8G108500 Prunus persica HOM05D000005 ORTHO05D000012 3.7e-14 82.4 170 32.9
Prupe.8G108800 Prunus persica HOM05D000005 ORTHO05D000012 3.7e-14 82.4 170 32.9
FAN08G0141 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.4e-14 81.6 150 34.7
FAN13G1039 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.4e-14 81.6 149 35.6
FAN04G2322 Fragaria x ananassa HOM05D000005 ORTHO05D010497 1.4e-13 80.5 149 34.2
RcHm_v2.0_Chr6g0261741 Rosa chinensis HOM05D000005 ORTHO05D010497 1.9e-13 80.1 154 37.0
Prupe.8G111500 Prunus persica HOM05D000005 ORTHO05D000012 2.4e-13 79.7 155 37.4
Prupe.8G112100 Prunus persica HOM05D000005 ORTHO05D000012 1.2e-12 77.4 155 38.1
FAN13G2851 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-12 77.0 150 36.7
FAN04G3033 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.5e-12 75.9 153 35.9
RcHm_v2.0_Chr6g0262681 Rosa chinensis HOM05D000005 ORTHO05D010497 4.6e-12 75.5 159 35.2
Prupe.8G111100 Prunus persica HOM05D000005 ORTHO05D010497 6.0e-12 75.1 152 32.2
FAN08G0517 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.8e-12 74.7 148 37.2
RcHm_v2.0_Chr6g0267621 Rosa chinensis HOM05D000005 ORTHO05D000012 7.8e-12 74.7 177 33.3
FAN11G1451 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.0e-11 72.8 162 32.1
FAN18G1249 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.0e-11 72.8 149 32.9
RcHm_v2.0_Chr6g0261191 Rosa chinensis HOM05D000005 ORTHO05D010497 5.1e-11 72.0 150 34.0
RcHm_v2.0_Chr6g0265601 Rosa chinensis HOM05D000005 ORTHO05D010497 5.1e-11 72.0 83 39.8
Prupe.8G110800 Prunus persica HOM05D000005 ORTHO05D000012 6.6e-11 71.6 97 43.3
RcHm_v2.0_Chr6g0261281 Rosa chinensis HOM05D000005 ORTHO05D010497 6.6e-11 71.6 150 34.0
RcHm_v2.0_Chr6g0261901 Rosa chinensis HOM05D000005 ORTHO05D000012 8.6e-11 71.2 155 36.1
RcHm_v2.0_Chr6g0265631 Rosa chinensis HOM05D000005 ORTHO05D000012 8.6e-11 71.2 148 33.1
FvH4_5g39151 Fragaria vesca HOM05D000005 ORTHO05D000012 1.1e-10 70.9 148 36.5
Prupe.8G111200 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-10 70.9 155 34.2
RcHm_v2.0_Chr6g0268391 Rosa chinensis HOM05D000005 ORTHO05D010497 1.1e-10 70.9 150 36.0
Prupe.8G109500 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-10 70.5 170 31.2
FvH4_5g39160 Fragaria vesca HOM05D000005 ORTHO05D000294 1.9e-10 70.1 152 34.2
Prupe.2G057100 Prunus persica HOM05D000005 ORTHO05D020377 2.5e-10 69.7 61 49.2
Prupe.2G057800 Prunus persica HOM05D000005 ORTHO05D000012 2.5e-10 69.7 61 50.8
Prupe.2G055200 Prunus persica HOM05D000005 ORTHO05D000012 4.3e-10 68.9 75 41.3
Prupe.2G055700 Prunus persica HOM05D000005 ORTHO05D000012 4.3e-10 68.9 162 29.6
Prupe.8G109200 Prunus persica HOM05D000005 ORTHO05D000012 4.3e-10 68.9 161 28.0
RcHm_v2.0_Chr6g0262851 Rosa chinensis HOM05D000005 ORTHO05D010497 5.6e-10 68.6 148 33.8
FAN24G0617 Fragaria x ananassa HOM05D000005 ORTHO05D010497 7.3e-10 68.2 149 31.5
FAN24G1164 Fragaria x ananassa HOM05D000005 ORTHO05D010497 7.3e-10 68.2 149 31.5
RcHm_v2.0_Chr6g0261411 Rosa chinensis HOM05D000005 ORTHO05D010497 7.3e-10 68.2 153 34.6
FAN04G0155 Fragaria x ananassa HOM05D000005 ORTHO05D010497 1.6e-09 67.0 151 34.4
FvH4_1g15650 Fragaria vesca HOM05D000005 ORTHO05D000294 2.1e-09 66.6 151 34.4
RcHm_v2.0_Chr6g0261091 Rosa chinensis HOM05D000005 ORTHO05D010497 2.1e-09 66.6 152 33.6
RcHm_v2.0_Chr6g0261451 Rosa chinensis HOM05D000005 ORTHO05D000012 2.8e-09 66.2 152 31.6
FAN20G0174 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.6e-09 65.9 149 30.2
FvH4_2g09350 Fragaria vesca HOM05D000005 ORTHO05D000012 6.2e-09 65.1 148 31.1
FAN08G0146 Fragaria x ananassa HOM05D000005 ORTHO05D010497 6.2e-09 65.1 150 32.0
RcHm_v2.0_Chr6g0261701 Rosa chinensis HOM05D000005 ORTHO05D010497 1.1e-08 64.3 154 31.8
Prupe.8G110600 Prunus persica HOM05D000005 ORTHO05D000012 2.4e-08 63.2 162 31.5
RcHm_v2.0_Chr6g0267701 Rosa chinensis HOM05D000005 ORTHO05D010497 2.4e-08 63.2 64 48.4
RcHm_v2.0_Chr7g0225241 Rosa chinensis HOM05D000005 ORTHO05D000012 4.0e-08 62.4 160 33.8
Prupe.2G018300 Prunus persica HOM05D000005 ORTHO05D000012 5.2e-08 62.0 82 39.0
FAN08G1990 Fragaria x ananassa HOM05D000005 ORTHO05D000012 8.9e-08 61.2 63 50.8
Prupe.2G056100 Prunus persica HOM05D000005 ORTHO05D000012 8.9e-08 61.2 167 29.9
Prupe.2G088500 Prunus persica HOM05D000005 ORTHO05D000012 8.9e-08 61.2 157 30.6
Prupe.8G111900 Prunus persica HOM05D000005 ORTHO05D010497 8.9e-08 61.2 164 31.1
RcHm_v2.0_Chr6g0261971 Rosa chinensis HOM05D000005 ORTHO05D000012 1.2e-07 60.8 64 46.9
Prupe.2G057600 Prunus persica HOM05D000005 ORTHO05D000012 7.6e-07 58.2 82 37.8
QL11p021408 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-06 57.4 162 28.4
RcHm_v2.0_Chr6g0260731 Rosa chinensis HOM05D000005 ORTHO05D000012 1.3e-06 57.4 162 30.2
RcHm_v2.0_Chr6g0276051 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-06 57.0 50 44.0
MD04G1015000 Malus domestica HOM05D000005 ORTHO05D000012 2.9e-06 56.2 87 34.5
FAN08G1734 Fragaria x ananassa HOM05D000005 ORTHO05D010497 4.9e-06 55.5 156 31.4
RcHm_v2.0_Chr6g0265141 Rosa chinensis HOM05D000005 ORTHO05D010497 4.9e-06 55.5 163 30.1
RcHm_v2.0_Chr6g0276061 Rosa chinensis HOM05D000005 ORTHO05D000012 4.9e-06 55.5 50 44.0
RcHm_v2.0_Chr6g0276021 Rosa chinensis HOM05D000005 ORTHO05D000012 6.4e-06 55.1 69 39.1


User provided reference genes

Program Settings