Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G104400 Prunus persica HOM05D004837 ORTHO05D005741 0.0e+00 1217.2 684 100.0
MD10G1081900 Malus domestica HOM05D004837 ORTHO05D005741 0.0e+00 1132.9 685 91.2
RcHm_v2.0_Chr7g0184861 Rosa chinensis HOM05D004837 ORTHO05D005741 0.0e+00 1104.4 680 90.4
FvH4_5g12492 Fragaria vesca HOM05D004837 ORTHO05D005741 2.3e-311 1071.6 680 86.5
CSS0011479 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 5.6e-311 1070.5 685 85.4
FAN18G2885 Fragaria x ananassa HOM05D004837 ORTHO05D005741 4.6e-310 1067.4 680 86.2
CSS0007108 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 6.0e-310 1067.0 685 85.3
FAN08G2631 Fragaria x ananassa HOM05D004837 ORTHO05D005741 2.3e-309 1065.1 680 86.2
Potri.012G061000 Populus trichocarpa HOM05D004837 ORTHO05D005741 8.2e-307 1056.6 684 85.1
CANSAT80G2884 Cannabis sativa HOM05D004837 ORTHO05D005741 9.0e-306 1053.1 690 84.2
CiPaw.15G128500 Carya illinoinensis HOM05D004837 ORTHO05D005741 1.2e-305 1052.7 683 84.5
Atru.chr9.792 Acer truncatum HOM05D004837 ORTHO05D005741 5.8e-305 1050.4 686 84.5
Cfa019797 Carpinus fangiana HOM05D004837 ORTHO05D005741 2.9e-304 1048.1 684 83.8
Actinidia35081 Actinidia chinensis HOM05D004837 ORTHO05D005741 3.8e-304 1047.7 685 83.6
TWI15G0076 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 6.5e-304 1047.0 684 83.9
Ciclev10019149m.g Citrus clementina HOM05D004837 ORTHO05D005741 1.8e-301 1038.9 685 82.9
FAN18G2415 Fragaria x ananassa HOM05D004837 ORTHO05D005741 2.3e-301 1038.5 729 80.5
TWI81G0923 Tripterygium wilfordii HOM05D004837 ORTHO05D005741 2.3e-301 1038.5 684 83.0
CSS0025722 Camellia sinensis var. sinensis HOM05D004837 ORTHO05D005741 5.1e-301 1037.3 685 83.8
FAN04G0597 Fragaria x ananassa HOM05D004837 ORTHO05D005741 6.7e-301 1036.9 680 84.3
ClCG03G012520 Citrullus lanatus HOM05D004837 ORTHO05D005741 7.4e-300 1033.5 687 82.2
Gorai.006G062600 Gossypium raimondii HOM05D004837 ORTHO05D005741 3.7e-299 1031.2 680 83.2
Manes.01G012900 Manihot esculenta HOM05D004837 ORTHO05D005741 1.8e-298 1028.9 684 83.5
Thecc.03G030500 Theobroma cacao HOM05D004837 ORTHO05D005741 1.8e-298 1028.9 684 82.7
Gohir.D09G047500 Gossypium hirsutum HOM05D004837 ORTHO05D005741 4.1e-298 1027.7 680 83.1
COL.COLO4_16258 Corchorus olitorius HOM05D004837 ORTHO05D005741 5.3e-298 1027.3 684 83.2
Gohir.A09G047000 Gossypium hirsutum HOM05D004837 ORTHO05D005741 5.3e-298 1027.3 680 82.9
Medtr8g103950 Medicago truncatula HOM05D004837 ORTHO05D005741 1.3e-296 1022.7 688 82.0
CsaV3_1G043510 Cucumis sativus L. HOM05D004837 ORTHO05D005741 1.1e-295 1019.6 687 81.8
Lj5C146T15 Lonicera japonica HOM05D004837 ORTHO05D005741 1.9e-295 1018.8 655 84.3
TAR629G1790 Trochodendron aralioides HOM05D004837 ORTHO05D005741 3.2e-295 1018.1 686 81.2
Glyma.07G089600 Glycine max HOM05D004837 ORTHO05D005741 9.4e-295 1016.5 687 82.2
Manes.05G138800 Manihot esculenta HOM05D004837 ORTHO05D005741 6.1e-294 1013.8 685 82.5
vmacro23526 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 1.8e-293 1012.3 746 76.1
vmacro16451 Vaccinium macrocarpon HOM05D004837 ORTHO05D005741 2.3e-293 1011.9 746 76.1
arahy.Tifrunner.gnm1.ann1.SIGA6A Arachis hypogaea HOM05D004837 ORTHO05D005741 6.7e-293 1010.4 684 81.7
PSO063G6385 Papaver somniferum HOM05D004837 ORTHO05D005741 1.1e-292 1009.6 669 81.3
Solyc06g069210.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 1.1e-292 1009.6 686 80.2
Lj2g0006103 Lotus japonicus HOM05D004837 ORTHO05D005741 1.5e-292 1009.2 690 81.6
HanXRQChr17g0558331 Helianthus annuus HOM05D004837 ORTHO05D005741 3.3e-292 1008.1 690 80.6
Lalb_Chr22g0352981 Lupinus albus HOM05D004837 ORTHO05D005741 4.3e-292 1007.7 682 82.6
PSO782G0716 Papaver somniferum HOM05D004837 ORTHO05D005741 1.3e-291 1006.1 669 81.3
Sed0018155 Sechium edule HOM05D004837 ORTHO05D005741 1.7e-291 1005.7 687 81.1
Glyma.09G187100 Glycine max HOM05D004837 ORTHO05D005741 2.8e-291 1005.0 689 81.1
Thhalv10020192m.g Eutrema salsugineum HOM05D004837 ORTHO05D005741 3.7e-291 1004.6 691 80.6
BolC5t33444H Brassica oleracea HOM05D004837 ORTHO05D005741 1.4e-290 1002.7 691 81.2
AT3G18480 Arabidopsis thaliana HOM05D004837 ORTHO05D005741 1.8e-290 1002.3 690 79.6
THA.LOC104821845 Tarenaya hassleriana HOM05D004837 ORTHO05D005741 2.4e-290 1001.9 685 80.3
GSVIVG01008258001 Vitis vinifera HOM05D004837 ORTHO05D005741 6.9e-290 1000.3 668 81.7
Lj4g0025474 Lotus japonicus HOM05D004837 ORTHO05D005741 2.0e-289 998.8 682 81.7
Lsat_1_v5_gn_8_147101 Lactuca sativa HOM05D004837 ORTHO05D005741 2.6e-289 998.4 686 79.3
ECA233G3214 Erigeron canadensis HOM05D004837 ORTHO05D005741 5.9e-289 997.3 668 81.3
Aqoxy3G03933 Aquilegia oxysepala HOM05D004837 ORTHO05D005741 2.2e-288 995.3 664 81.9
AL3G31770 Arabidopsis lyrata HOM05D004837 ORTHO05D005741 3.8e-288 994.6 689 78.8
Aa31LG8G5290 Aethionema arabicum HOM05D004837 ORTHO05D005741 1.1e-287 993.0 692 79.2
TPR.G21711 Trifolium pratense HOM05D004837 ORTHO05D005741 9.4e-287 989.9 660 83.8
Lalb_Chr24g0397611 Lupinus albus HOM05D004837 ORTHO05D005741 2.1e-286 988.8 686 80.8
Rhsim12G0143900 Rhododendron simsii HOM05D004837 ORTHO05D005741 2.1e-286 988.8 653 82.4
Duzib084G1378 Durio zibethinus HOM05D004837 ORTHO05D005741 4.7e-286 987.6 684 80.7
Eucgr.B00707 Eucalyptus grandis HOM05D004837 ORTHO05D005741 6.1e-286 987.3 698 79.8
Nn4g23774 Nelumbo nucifera HOM05D004837 ORTHO05D005741 6.1e-286 987.3 686 79.4
Ca_25454_v3 Cicer arietinum L. HOM05D004837 ORTHO05D005741 1.4e-285 986.1 688 79.2
Sopen06g026470 Solanum pennellii HOM05D004837 ORTHO05D005741 1.8e-285 985.7 686 78.9
C05p47190 Brassica napus HOM05D004837 ORTHO05D005741 9.7e-284 979.9 691 79.9
BcaC05g28614 Brassica carinata HOM05D004837 ORTHO05D005741 2.8e-283 978.4 691 79.7
Carub.0003s1824 Capsella rubella HOM05D004837 ORTHO05D005741 2.8e-283 978.4 691 78.9
Phvul.004G160100 Phaseolus vulgaris HOM05D004837 ORTHO05D005741 3.7e-283 978.0 692 79.6
arahy.Tifrunner.gnm1.ann1.7R0LHH Arachis hypogaea HOM05D004837 ORTHO05D005741 3.1e-282 974.9 725 75.9
QL10p023827 Quercus lobata HOM05D004837 ORTHO05D005741 5.9e-281 970.7 683 78.5
arahy.Tifrunner.gnm1.ann1.71FAZ0 Arachis hypogaea HOM05D004837 ORTHO05D005741 7.7e-281 970.3 725 75.6
CARHR093830 Cardamine hirsuta HOM05D004837 ORTHO05D005741 1.7e-280 969.1 693 77.3
Cpa.g.sc13.20 Carica papaya HOM05D004837 ORTHO05D005741 1.7e-280 969.1 689 79.8
Sp3g16570 Schrenkiella parvula HOM05D004837 ORTHO05D005741 5.0e-280 967.6 690 79.3
DCAR_004539 Daucus carota HOM05D004837 ORTHO05D005741 1.6e-278 962.6 679 77.8
PGR083G0937 Punica granatum HOM05D004837 ORTHO05D005741 1.8e-277 959.1 684 79.7
BolC1t04537H Brassica oleracea HOM05D004837 ORTHO05D005741 2.3e-277 958.7 692 76.7
C01p45740 Brassica napus HOM05D004837 ORTHO05D005741 9.1e-274 946.8 692 76.6
BcaC09g48805 Brassica carinata HOM05D004837 ORTHO05D005741 3.5e-273 944.9 692 76.4
BcaB04g20769 Brassica carinata HOM05D004837 ORTHO05D005741 2.9e-272 941.8 688 76.6
A05p31170 Brassica napus HOM05D004837 ORTHO05D005741 2.9e-272 941.8 690 78.0
BraA05t21958Z Brassica rapa HOM05D004837 ORTHO05D005741 2.9e-272 941.8 690 78.0
Sabra12G0044300 Salix brachista HOM05D004837 ORTHO05D005741 3.2e-271 938.3 694 77.5
BcaB06g25891 Brassica carinata HOM05D004837 ORTHO05D005741 5.5e-271 937.6 689 76.3
Ah.02g115350 Amaranthus hybridus HOM05D004837 ORTHO05D005741 4.0e-269 931.4 685 78.0
SGA_v2.0_scaffold10G05151 Striga asiatica HOM05D004837 ORTHO05D005741 1.5e-268 929.5 689 76.3
A01p35930 Brassica napus HOM05D004837 ORTHO05D005741 2.6e-268 928.7 691 75.4
Peaxi162Scf00013g00943 Petunia axillaris HOM05D004837 ORTHO05D005741 3.7e-267 924.9 655 78.0
Haze_18623 Corylus avellana HOM05D004837 ORTHO05D005741 1.4e-266 922.9 1034 56.2
AUR62025880 Chenopodium quinoa HOM05D004837 ORTHO05D005741 7.0e-266 920.6 685 78.0
VMungo0464G1696 Vigna mungo HOM05D004837 ORTHO05D005741 1.2e-265 919.8 692 77.7
AUR62029852 Chenopodium quinoa HOM05D004837 ORTHO05D005741 1.6e-265 919.5 685 77.8
MSTRG.14939 Avicennia marina HOM05D004837 ORTHO05D005741 5.9e-265 917.5 683 75.3
Nitab4.5_0010565g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 5.9e-265 917.5 733 71.5
Cc04_g07300 Coffea canephora HOM05D004837 ORTHO05D005741 6.5e-264 914.1 685 75.0
MBI13_g10043_MAGBIO Magnolia biondii HOM05D004837 ORTHO05D005741 8.5e-264 913.7 682 75.1
BraA01t03672Z Brassica rapa HOM05D004837 ORTHO05D005741 1.9e-263 912.5 722 72.2
EL10Ac5g11426 Beta vulgaris HOM05D004837 ORTHO05D005741 5.5e-263 911.0 685 75.3
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 4.7e-262 907.9 637 79.6
Migut.M00003 Erythranthe guttata HOM05D004837 ORTHO05D005741 1.4e-261 906.4 683 74.5
unitig_37.g12022 Utricularia gibba HOM05D004837 ORTHO05D005741 4.4e-260 901.4 677 73.0
Dinv40420 Davidia involucrata HOM05D004837 ORTHO05D005741 3.8e-256 888.3 572 85.3
arahy.Tifrunner.gnm1.ann1.9R3N8Z Arachis hypogaea HOM05D004837 ORTHO05D005741 1.9e-255 885.9 684 74.6
Nitab4.5_0001432g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 4.9e-251 871.3 719 70.0
Hund02403 Selenicereus undatus HOM05D004837 ORTHO05D005741 1.1e-250 870.2 622 78.3
CDE11G0344 Ceratophyllum demersum HOM05D004837 ORTHO05D005741 1.4e-250 869.8 651 74.7
Os03g0710900 Oryza sativa ssp. japonica HOM05D004837 ORTHO05D005741 2.9e-248 862.1 703 70.0
Nitab4.5_0001599g0070 Nicotiana tabacum HOM05D004837 ORTHO05D005741 1.8e-245 852.8 719 68.3
Nitab4.5_0008699g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 4.1e-242 841.6 740 66.9
HPP92_013262 Vanilla planifolia HOM05D004837 ORTHO05D005741 2.5e-239 832.4 669 70.0
Zm00001eb216420 Zea mays HOM05D004837 ORTHO05D005741 4.7e-238 828.2 698 67.8
ATR0021G039 Amborella trichopoda HOM05D004837 ORTHO05D005741 3.4e-236 822.0 685 68.0
SEGI_01686 Sequoiadendron giganteum HOM05D004837 ORTHO05D005741 4.4e-236 821.6 667 69.6
Mapoly0091s0053 Marchantia polymorpha HOM05D004837 ORTHO05D005741 1.4e-218 763.5 651 67.3
Psat7g012560 Pisum sativum HOM05D004837 ORTHO05D005741 4.3e-215 751.9 551 78.6
Pp3c3_5600 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.4e-210 736.9 667 62.8
Oeu016160.3 Olea europaea HOM05D004837 ORTHO05D005741 2.4e-210 736.1 713 62.6
SMO147G0276 Selaginella moellendorffii HOM05D004837 ORTHO05D005741 1.3e-206 723.8 664 61.3
Pp3c25_10040 Physcomitrium patens HOM05D004837 ORTHO05D005741 1.5e-204 716.8 660 61.5
CBR_g38539 Chara braunii HOM05D004837 ORTHO05D005741 6.5e-163 578.6 680 52.1
Actinidia31023 Actinidia chinensis HOM05D004837 ORTHO05D005741 9.4e-162 574.7 368 82.9
PGSC0003DMG400004053 Solanum tuberosum HOM05D004837 ORTHO05D005741 8.0e-161 571.6 433 75.5
MELO3C015107.2 Cucumis melo HOM05D004837 ORTHO05D005741 4.4e-159 565.8 401 79.8
HPP92_013216 Vanilla planifolia HOM05D004837 ORTHO05D005741 2.6e-135 486.9 342 74.0
AagrBONN_evm.TU.Sc2ySwM_228.1000 Anthoceros agrestis HOM05D004837 ORTHO05D005741 4.4e-127 459.5 568 50.0
CAN.G423.1 Capsicum annuum HOM05D004837 ORTHO05D005741 2.8e-105 387.1 420 58.6
Atru.chr9.1054 Acer truncatum HOM05D004837 ORTHO05D005741 1.0e-99 368.6 501 51.3
Atru.chr9.1055 Acer truncatum HOM05D004837 ORTHO05D005741 3.1e-96 357.1 508 50.2
Cre08.g382650 Chlamydomonas reinhardtii HOM05D004837 ORTHO05D005741 1.0e-78 298.9 708 33.2
HPP92_013215 Vanilla planifolia HOM05D004837 ORTHO05D005741 1.3e-78 298.5 273 65.6
Prupe.8G103800 Prunus persica HOM05D004837 ORTHO05D005741 1.4e-69 268.5 774 35.4
Gorai.008G286000 Gossypium raimondii HOM05D004837 ORTHO05D005741 1.2e-55 222.2 560 35.2
MELO3C029547.2 Cucumis melo HOM05D004837 ORTHO05D005741 9.7e-50 202.6 208 60.6
Gohir.D12G266250 Gossypium hirsutum HOM05D004837 ORTHO05D005741 9.1e-48 196.1 151 72.8
CAN.G587.83 Capsicum annuum HOM05D004837 ORTHO05D005741 8.5e-46 189.5 129 76.7
SHI30382 Sapria himalayana HOM05D004837 ORTHO05D005741 1.6e-44 185.3 125 79.2
Nitab4.5_0010701g0010 Nicotiana tabacum HOM05D004837 ORTHO05D005741 2.1e-36 158.3 94 85.1
PRCOL_00005675 Prasinoderma coloniale HOM05D004837 ORTHO05D005741 4.1e-32 144.1 598 27.6
Ah.11g042150 Amaranthus hybridus HOM05D004837 ORTHO05D005741 4.7e-28 130.6 93 78.5
Cfa021462 Carpinus fangiana HOM05D004837 ORTHO05D005741 7.3e-21 106.7 706 22.9
Solyc03g119670.3 Solanum lycopersicum HOM05D004837 ORTHO05D005741 2.6e-18 98.2 71 74.6
MCO10G228 Micromonas commoda HOM05D004837 ORTHO05D005741 1.8e-16 92.0 700 24.0
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 4.6e-15 87.4 109 55.0
BolC8t50465H Brassica oleracea HOM05D004837 ORTHO05D005741 2.5e-13 81.6 82 62.2
Actinidia31022 Actinidia chinensis HOM05D004837 ORTHO05D005741 1.5e-10 72.4 199 36.7
Psat7g009760 Pisum sativum HOM05D004837 ORTHO05D005741 4.4e-10 70.9 43 74.4
C08p28590 Brassica napus HOM05D004837 ORTHO05D005741 1.3e-09 69.3 82 58.5
DCAR_013034 Daucus carota HOM05D004837 ORTHO05D005741 4.1e-08 64.3 54 66.7


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