Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 1.0e-41 172.9 84 100.0
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 3.8e-41 171.0 84 98.8
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 6.4e-36 153.7 84 91.7
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 2.5e-08 62.0 48 62.5
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 1.6e-07 59.3 48 60.4
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 2.1e-07 58.9 43 67.4
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.8e-07 58.5 62 48.4
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 6.2e-07 57.4 48 58.3
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 8.1e-07 57.0 37 70.3
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 8.1e-07 57.0 63 49.2
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 8.1e-07 57.0 49 59.2
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.1e-06 56.6 61 52.5
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.1e-06 56.6 43 65.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 1.1e-06 56.6 43 65.1
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.1e-06 56.6 43 60.5
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 1.1e-06 56.6 43 60.5
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.1e-06 56.6 54 55.6
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.4e-06 56.2 46 56.5
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 1.8e-06 55.8 37 73.0
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 2.4e-06 55.5 37 67.6
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 2.4e-06 55.5 43 62.8
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-06 55.1 46 54.3
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 3.1e-06 55.1 48 52.1
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 3.1e-06 55.1 48 56.2
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 6.9e-06 53.9 46 54.3
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 9.0e-06 53.5 37 64.9
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 9.0e-06 53.5 37 70.3


User provided reference genes

Program Settings