Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G102100 Prunus persica HOM05D013780 ORTHO05D011525 7.9e-136 487.3 273 100.0
FvH4_2g08260 Fragaria vesca HOM05D013780 ORTHO05D011525 3.6e-56 222.6 280 53.9
FAN24G1050 Fragaria x ananassa HOM05D013780 ORTHO05D011525 8.1e-56 221.5 260 56.2
RcHm_v2.0_Chr6g0263141 Rosa chinensis HOM05D013780 ORTHO05D011525 2.9e-53 213.0 273 52.0
MD10G1080800 Malus domestica HOM05D013780 ORTHO05D011525 7.8e-43 178.3 261 47.1
FAN15G0680 Fragaria x ananassa HOM05D013780 ORTHO05D011525 3.0e-34 149.8 362 37.0
QL11p042781 Quercus lobata HOM05D013780 ORTHO05D011525 8.1e-24 115.2 268 36.2
Cfa004979 Carpinus fangiana HOM05D013780 ORTHO05D011525 6.7e-18 95.5 152 46.1
Haze_02410 Corylus avellana HOM05D013780 ORTHO05D011525 6.2e-16 89.0 207 38.6
Duzib052G1011 Durio zibethinus HOM05D011181 ORTHO05D011525 1.8e-15 87.4 202 39.1
Thecc.02G122700 Theobroma cacao HOM05D011181 ORTHO05D011525 3.2e-12 76.6 163 40.5
TAR381G1105 Trochodendron aralioides HOM05D001459 ORTHO05D001359 7.1e-12 75.5 184 34.8
TPR.G18578 Trifolium pratense HOM05D011181 ORTHO05D011525 1.6e-11 74.3 163 38.0
Potri.005G126000 Populus trichocarpa HOM05D001459 ORTHO05D001359 2.1e-11 73.9 227 34.4
Psat6g097640 Pisum sativum HOM05D011181 ORTHO05D011525 1.0e-10 71.6 82 51.2
Ca_12491_v3 Cicer arietinum L. HOM05D011181 ORTHO05D011525 3.0e-10 70.1 171 33.9
Lalb_Chr17g0338181 Lupinus albus HOM05D011181 ORTHO05D011525 3.0e-10 70.1 221 32.6
Medtr2g045670 Medicago truncatula HOM05D011181 ORTHO05D011525 3.0e-10 70.1 167 34.1
PGSC0003DMG400012660 Solanum tuberosum HOM05D001459 ORTHO05D001359 3.0e-10 70.1 194 35.6
Glyma.20G007700 Glycine max HOM05D011181 ORTHO05D011525 8.7e-10 68.6 176 34.1
Dinv36055 Davidia involucrata HOM05D001459 ORTHO05D001359 1.5e-09 67.8 84 46.4
VMungo1215G3207 Vigna mungo HOM05D011181 ORTHO05D011525 1.9e-09 67.4 144 38.2
Peaxi162Scf00427g00516 Petunia axillaris HOM05D001459 ORTHO05D001359 2.5e-09 67.0 207 35.7
arahy.Tifrunner.gnm1.ann1.1D6R9Y Arachis hypogaea HOM05D011181 ORTHO05D011525 3.3e-09 66.6 184 33.7
arahy.Tifrunner.gnm1.ann1.R46QP0 Arachis hypogaea HOM05D011181 ORTHO05D011525 4.3e-09 66.2 174 36.8
Hma1.2p1_1228F.1_g268620 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 5.7e-09 65.9 168 33.9
Dinv42088 Davidia involucrata HOM05D001459 ORTHO05D045162 9.7e-09 65.1 267 29.6
HanXRQChr03g0069071 Helianthus annuus HOM05D001459 ORTHO05D001359 1.3e-08 64.7 178 34.8
GSVIVG01031924001 Vitis vinifera HOM05D011181 ORTHO05D011525 3.7e-08 63.2 99 40.4
TWI73G0633 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 4.8e-08 62.8 101 42.6
CSS0014012 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 6.3e-08 62.4 68 55.9
COL.COLO4_32451 Corchorus olitorius HOM05D011181 ORTHO05D011525 8.2e-08 62.0 89 43.8
Lsat_1_v5_gn_4_153461 Lactuca sativa HOM05D001459 ORTHO05D001359 8.2e-08 62.0 211 33.6
Sed0024040 Sechium edule HOM05D001459 ORTHO05D001359 8.2e-08 62.0 235 31.1
Actinidia36544 Actinidia chinensis HOM05D001459 ORTHO05D001359 1.1e-07 61.6 218 35.3
MBI16_g37292_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 1.1e-07 61.6 100 43.0
CARHR245080 Cardamine hirsuta HOM05D001459 ORTHO05D001359 2.4e-07 60.5 191 29.3
CAN.G358.125 Capsicum annuum HOM05D001459 ORTHO05D001359 3.1e-07 60.1 218 32.1
Medtr2g045700 Medicago truncatula HOM05D011181 ORTHO05D011525 4.1e-07 59.7 171 32.7
Hma1.2p1_0203F.1_g086580 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 5.3e-07 59.3 265 29.1
Solyc02g062950.3 Solanum lycopersicum HOM05D001459 ORTHO05D001359 5.3e-07 59.3 165 33.3
Sopen02g013990 Solanum pennellii HOM05D001459 ORTHO05D001359 5.3e-07 59.3 165 33.3
SGA_v2.0_scaffold33G13393 Striga asiatica HOM05D001459 ORTHO05D001359 5.3e-07 59.3 136 36.0
Actinidia12110 Actinidia chinensis HOM05D001459 ORTHO05D001359 6.9e-07 58.9 218 34.9
arahy.Tifrunner.gnm1.ann1.KB1QEP Arachis hypogaea HOM05D001459 ORTHO05D001359 6.9e-07 58.9 112 41.1
Lj2g0001412 Lotus japonicus HOM05D001459 ORTHO05D001359 6.9e-07 58.9 122 36.9
Sp7g34390 Schrenkiella parvula HOM05D001459 ORTHO05D001359 6.9e-07 58.9 191 30.4
Migut.H00187 Erythranthe guttata HOM05D001459 ORTHO05D001359 9.0e-07 58.5 161 36.6
HanXRQChr11g0324881 Helianthus annuus HOM05D001459 ORTHO05D001359 9.0e-07 58.5 98 41.8
Aa31LG6G13540 Aethionema arabicum HOM05D001459 ORTHO05D001359 2.0e-06 57.4 197 31.5
BcaNung04435 Brassica carinata HOM05D001459 ORTHO05D001359 2.0e-06 57.4 181 35.9
HanXRQChr07g0199191 Helianthus annuus HOM05D013780 ORTHO05D011525 2.0e-06 57.4 85 47.1
BraA01t00207Z Brassica rapa HOM05D001459 ORTHO05D001359 2.6e-06 57.0 187 31.6
Medtr1g034500 Medicago truncatula HOM05D011181 ORTHO05D011525 2.6e-06 57.0 207 28.0
Thhalv10025733m.g Eutrema salsugineum HOM05D001459 ORTHO05D001359 3.4e-06 56.6 216 32.4
arahy.Tifrunner.gnm1.ann1.Z1Y8P7 Arachis hypogaea HOM05D001459 ORTHO05D001359 4.5e-06 56.2 112 40.2
BcaB03g12373 Brassica carinata HOM05D001459 ORTHO05D001359 5.9e-06 55.8 116 37.1
BcaC01g00445 Brassica carinata HOM05D001459 ORTHO05D001359 5.9e-06 55.8 187 30.5
C03p79920 Brassica napus HOM05D001459 ORTHO05D001359 5.9e-06 55.8 187 30.5
Haze_15122 Corylus avellana HOM05D001459 ORTHO05D001359 5.9e-06 55.8 110 38.2
Atru.chr3.534 Acer truncatum HOM05D001459 ORTHO05D001359 7.7e-06 55.5 85 43.5
BcaNung00705 Brassica carinata HOM05D001459 ORTHO05D001359 7.7e-06 55.5 188 30.9
A01p02180 Brassica napus HOM05D001459 ORTHO05D001359 7.7e-06 55.5 187 31.0
C01p02370 Brassica napus HOM05D001459 ORTHO05D001359 7.7e-06 55.5 188 30.9
GSVIVG01009665001 Vitis vinifera HOM05D001459 ORTHO05D001359 7.7e-06 55.5 85 41.2
A08p22380 Brassica napus HOM05D001459 ORTHO05D001359 1.0e-05 55.1 190 33.2
BolC3t20245H Brassica oleracea HOM05D001459 ORTHO05D001359 1.0e-05 55.1 191 34.0
BraA08t34195Z Brassica rapa HOM05D001459 ORTHO05D001359 1.0e-05 55.1 190 33.2
Pp3c18_19240 Physcomitrium patens HOM05D001459 ORTHO05D001359 1.0e-05 55.1 98 38.8


User provided reference genes

Program Settings