Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G101300 Prunus persica HOM05D008097 ORTHO05D010102 3.5e-77 291.6 150 100.0
Prupe.7G038400 Prunus persica HOM05D000003 ORTHO05D010102 6.7e-36 154.5 111 76.6
Prupe.3G126800 Prunus persica HOM05D008097 ORTHO05D010102 2.0e-24 116.3 121 51.2
Prupe.7G035500 Prunus persica HOM05D000003 ORTHO05D011650 4.2e-22 108.6 126 54.0
RcHm_v2.0_Chr4g0437761 Rosa chinensis HOM05D008097 ORTHO05D010102 7.9e-13 77.8 120 36.7
FvH4_7g10254 Fragaria vesca HOM05D008097 ORTHO05D010102 1.4e-12 77.0 126 36.5
RcHm_v2.0_Chr1g0339311 Rosa chinensis HOM05D008097 ORTHO05D010102 6.7e-12 74.7 119 34.5
FvH4_2g20801 Fragaria vesca HOM05D008097 ORTHO05D000167 1.5e-11 73.6 113 40.7
RcHm_v2.0_Chr7g0187741 Rosa chinensis HOM05D008097 ORTHO05D010102 4.3e-11 72.0 118 39.0
RcHm_v2.0_Chr1g0354891 Rosa chinensis HOM05D008097 ORTHO05D010102 7.4e-11 71.2 118 39.0
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-10 69.7 136 32.4
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-10 68.9 133 32.3
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-09 67.0 130 29.2
Prupe.2G069500 Prunus persica HOM05D000003 ORTHO05D010102 1.4e-09 67.0 107 36.4
Atru.chr9.1934 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-09 66.2 117 31.6
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-09 65.5 134 31.3
Atru.chr12.1685 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-09 65.1 118 35.6
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 5.3e-09 65.1 121 33.1
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 9.1e-09 64.3 119 31.9
Prupe.6G191300 Prunus persica HOM05D008097 ORTHO05D334878 9.1e-09 64.3 67 53.7
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 1.2e-08 63.9 121 34.7
Atru.chr13.2597 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-08 63.2 123 32.5
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 4.5e-08 62.0 118 30.5
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 62.0 119 31.1
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 62.0 128 32.0
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 5.9e-08 61.6 119 31.1
Atru.chr12.1854 Acer truncatum HOM05D000003 ORTHO05D000167 7.7e-08 61.2 133 27.1
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-07 60.8 118 28.8
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-07 60.5 137 29.9
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-07 60.5 132 28.0
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 60.1 118 32.2
Atru.chr1.805 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-07 59.3 109 32.1
Atru.chr12.2351 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-07 59.3 115 33.9
Atru.chr5.1667 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-07 59.3 110 34.5
Atru.chr11.542 Acer truncatum HOM05D000003 ORTHO05D000167 3.8e-07 58.9 119 30.3
Atru.chr6.529 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-07 58.5 128 31.2
Atru.chr7.1015 Acer truncatum HOM05D000003 ORTHO05D000167 5.0e-07 58.5 118 29.7
Atru.chr4.1446 Acer truncatum HOM05D000003 ORTHO05D000167 6.5e-07 58.2 113 32.7
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-07 58.2 109 32.1
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 6.5e-07 58.2 130 28.5
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 6.5e-07 58.2 120 34.2
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 8.5e-07 57.8 136 27.9
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 132 25.8
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 57.4 118 28.0
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.4 119 28.6
FvH4_2g14361 Fragaria vesca HOM05D008097 ORTHO05D010102 1.4e-06 57.0 87 40.2
FvH4_3g23591 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-06 57.0 90 41.1
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-06 56.6 118 29.7
Prupe.3G283300 Prunus persica HOM05D000003 ORTHO05D000167 1.9e-06 56.6 123 31.7
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 1.9e-06 56.6 121 31.4
RcHm_v2.0_Chr1g0320561 Rosa chinensis HOM05D008833 ORTHO05D010662 1.9e-06 56.6 98 38.8
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-06 56.2 118 27.1
Atru.chr10.1454 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-06 56.2 117 29.9
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 56.2 121 28.9
Atru.chr2.1599 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-06 55.8 123 29.3
Atru.ctg24.6 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 55.8 127 30.7
RcHm_v2.0_Chr3g0468731 Rosa chinensis HOM05D008097 ORTHO05D010102 3.2e-06 55.8 120 33.3
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-06 55.5 119 31.9
FAN25G3685 Fragaria x ananassa HOM05D008097 ORTHO05D010102 5.5e-06 55.1 120 32.5
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 7.2e-06 54.7 119 31.9
Atru.chr5.1665 Acer truncatum HOM05D000003 ORTHO05D000167 7.2e-06 54.7 111 27.0
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 7.2e-06 54.7 119 27.7
CANSAT54G0934 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-06 54.7 118 31.4
CANSAT56G0621 Cannabis sativa HOM05D000003 ORTHO05D000167 7.2e-06 54.7 119 30.3
FvH4_4g31671 Fragaria vesca HOM05D008097 ORTHO05D010102 7.2e-06 54.7 120 32.5
FAN14G3279 Fragaria x ananassa HOM05D008097 ORTHO05D010102 7.2e-06 54.7 120 30.0
RcHm_v2.0_Chr6g0279961 Rosa chinensis HOM05D008097 ORTHO05D010102 7.2e-06 54.7 105 36.2
TWI75G0036 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 7.2e-06 54.7 110 31.8
FAN25G2016 Fragaria x ananassa HOM05D008097 ORTHO05D010102 9.4e-06 54.3 120 32.5


User provided reference genes

Program Settings