Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 1.3e-57 226.5 124 100.0
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 4.2e-53 211.5 124 87.9
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 1.3e-49 199.9 124 84.7
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 2.0e-34 149.4 122 68.0
Prupe.8G099300 Prunus persica HOM05D007556 ORTHO05D002252 1.1e-32 143.7 124 66.9
Prupe.8G099000 Prunus persica HOM05D007556 ORTHO05D002252 5.4e-24 114.8 129 53.5
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.0e-15 86.3 98 45.9
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.7e-15 85.9 98 45.9
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 8.6e-14 80.9 98 43.9
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.5e-13 80.1 98 43.9
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 7.3e-13 77.8 91 48.4
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.1e-12 76.3 98 41.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.8e-12 75.9 108 41.7
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.7e-12 75.1 96 44.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 8.1e-12 74.3 96 44.8
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 1.1e-11 73.9 93 43.0
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.8e-11 73.2 94 43.6
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.8e-11 73.2 108 38.9
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 5.2e-11 71.6 94 42.6
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-10 70.5 92 40.2
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 2.0e-10 69.7 121 38.0
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 2.0e-10 69.7 97 44.3
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 2.6e-10 69.3 95 44.2
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.4e-10 68.9 107 38.3
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.4e-10 68.6 139 34.5
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.8e-10 68.2 92 39.1
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 7.5e-10 67.8 93 45.2
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 9.8e-10 67.4 102 43.1
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 9.8e-10 67.4 91 41.8
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.3e-09 67.0 116 40.5
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.3e-09 67.0 113 39.8
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.3e-09 67.0 109 38.5
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.7e-09 66.6 102 38.2
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.2e-09 66.2 99 38.4
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.2e-09 66.2 87 40.2
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 3.7e-09 65.5 109 44.0
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.7e-09 65.5 94 40.4
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 4.9e-09 65.1 101 36.6
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 8.3e-09 64.3 92 40.2
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 8.3e-09 64.3 90 36.7
Sc08g0000440 Simmondsia chinensis HOM05D007227 ORTHO05D002252 1.1e-08 63.9 60 53.3
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.4e-08 63.5 94 39.4
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 1.4e-08 63.5 112 31.2
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.9e-08 63.2 107 38.3
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.4e-08 62.8 92 35.9
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 2.4e-08 62.8 115 33.9
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 2.4e-08 62.8 92 40.2
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 2.4e-08 62.8 94 40.4
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.2e-08 62.4 131 37.4
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 4.1e-08 62.0 123 33.3
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 4.1e-08 62.0 116 37.1
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.1e-08 62.0 98 37.8
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 5.4e-08 61.6 113 37.2
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 5.4e-08 61.6 66 47.0
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 5.4e-08 61.6 94 37.2
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 7.1e-08 61.2 98 36.7
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-07 60.5 92 34.8
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 1.2e-07 60.5 94 38.3
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.6e-07 60.1 121 33.9
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 1.6e-07 60.1 94 38.3
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 2.1e-07 59.7 94 39.4
RcHm_v2.0_Chr6g0263911 Rosa chinensis HOM05D018529 ORTHO05D016305 3.5e-07 58.9 99 41.4
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 4.6e-07 58.5 63 46.0
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 4.6e-07 58.5 123 31.7
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 6.0e-07 58.2 65 47.7
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 6.0e-07 58.2 58 51.7
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.0e-07 58.2 89 36.0
RcHm_v2.0_Chr6g0263961 Rosa chinensis HOM05D018529 ORTHO05D016305 6.0e-07 58.2 146 37.7
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 7.8e-07 57.8 106 31.1
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 1.0e-06 57.4 90 41.1
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.3e-06 57.0 113 32.7
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 1.3e-06 57.0 110 34.5
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 1.3e-06 57.0 107 33.6
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 1.3e-06 57.0 95 37.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 56.6 92 33.7
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.7e-06 56.6 101 36.6
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 2.3e-06 56.2 47 53.2
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 2.3e-06 56.2 55 47.3
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 2.3e-06 56.2 123 35.0
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 3.0e-06 55.8 125 37.6
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.0e-06 55.8 47 55.3
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 3.9e-06 55.5 92 34.8
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.9e-06 55.5 62 46.8
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 5.1e-06 55.1 47 55.3
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-06 54.7 47 55.3
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.6e-06 54.7 112 31.2
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 8.6e-06 54.3 102 37.3
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 8.6e-06 54.3 112 33.9
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 8.6e-06 54.3 127 36.2
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 8.6e-06 54.3 47 55.3
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 8.6e-06 54.3 94 35.1
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 8.6e-06 54.3 47 55.3
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 8.6e-06 54.3 110 30.9


User provided reference genes

Program Settings