Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.1e-39 166.4 100 100.0
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.3e-32 142.9 100 75.0
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.1e-32 141.0 100 74.0
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-31 139.4 100 73.0
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.9e-31 139.0 101 74.3
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 1.3e-30 136.3 100 71.0
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.3e-30 136.3 98 72.4
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.3e-30 136.3 98 72.4
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.6e-30 136.0 101 69.3
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.6e-30 136.0 100 74.0
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.6e-30 136.0 100 73.0
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 3.6e-30 134.8 99 70.7
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.1e-29 133.3 100 72.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.4e-29 132.9 100 68.0
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.4e-29 132.1 100 70.0
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 4.0e-29 131.3 101 72.3
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 4.0e-29 131.3 100 70.0
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 5.3e-29 131.0 101 70.3
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 6.9e-29 130.6 102 70.6
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.0e-29 130.2 100 71.0
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.2e-28 129.8 100 69.0
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 4.4e-28 127.9 101 76.2
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 4.4e-28 127.9 102 72.5
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 5.8e-28 127.5 100 67.0
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.3e-27 126.3 98 66.3
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.3e-27 126.3 104 65.4
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.3e-27 126.3 103 66.0
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.7e-27 125.9 102 64.7
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 2.2e-27 125.6 100 67.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.9e-27 125.2 97 67.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 4.9e-27 124.4 98 66.3
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 6.4e-27 124.0 98 64.3
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 8.4e-27 123.6 101 64.4
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 8.4e-27 123.6 101 64.4
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 2.4e-26 122.1 100 67.0
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 4.2e-26 121.3 101 65.3
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 9.3e-26 120.2 100 64.0
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 9.3e-26 120.2 103 63.1
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.2e-25 119.8 102 62.7
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 2.1e-25 119.0 100 64.0
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 4.6e-25 117.9 98 63.3
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 6.0e-25 117.5 98 73.5
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 7.8e-25 117.1 99 61.6
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.3e-24 116.3 100 62.0
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.7e-24 115.9 101 62.4
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.3e-24 115.5 91 69.2
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.0e-24 115.2 100 60.0
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 3.0e-24 115.2 103 61.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 3.0e-24 115.2 100 69.0
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 3.9e-24 114.8 100 61.0
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 5.1e-24 114.4 100 60.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 6.6e-24 114.0 100 57.0
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.5e-23 112.8 105 61.9
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 2.5e-23 112.1 100 60.0
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 2.5e-23 112.1 100 57.0
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 3.3e-23 111.7 60 86.7
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 3.3e-23 111.7 87 67.8
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 9.6e-23 110.2 87 69.0
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.3e-22 109.8 99 58.6
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.3e-22 109.8 99 58.6
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 2.8e-22 108.6 98 70.4
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 3.6e-22 108.2 99 58.6
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 4.8e-22 107.8 62 85.5
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 6.2e-22 107.5 55 92.7
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 6.2e-22 107.5 55 92.7
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 8.1e-22 107.1 99 57.6
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 8.1e-22 107.1 62 80.6
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 8.1e-22 107.1 55 94.5
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 1.1e-21 106.7 100 58.0
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.4e-21 106.3 101 58.4
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.4e-21 106.3 97 57.7
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.8e-21 105.9 99 54.5
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.8e-21 105.9 99 54.5
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.8e-21 105.9 99 54.5
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.8e-21 105.9 98 59.2
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 1.8e-21 105.9 60 83.3
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 2.4e-21 105.5 88 64.8
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.1e-21 105.1 100 56.0
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.1e-21 105.1 100 56.0
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 3.1e-21 105.1 54 90.7
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.0e-21 104.8 99 55.6
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.0e-21 104.8 99 55.6
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 4.0e-21 104.8 60 83.3
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 5.3e-21 104.4 87 64.4
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 9.0e-21 103.6 56 87.5
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.5e-20 102.8 60 78.3
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.0e-20 102.4 91 61.5
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 2.6e-20 102.1 60 76.7
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 5.8e-20 100.9 88 62.5
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 7.6e-20 100.5 86 62.8
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 7.6e-20 100.5 87 63.2
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.7e-19 99.4 90 62.2
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 6.4e-19 97.4 100 54.0
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 1.1e-18 96.7 84 63.1
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.4e-18 96.3 54 81.5
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 5.4e-18 94.4 86 60.5
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 7.1e-18 94.0 83 60.2
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.0e-16 88.6 88 56.8
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 3.9e-16 88.2 88 56.8
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 5.1e-16 87.8 89 56.2
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.3e-14 83.2 90 55.6
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 1.6e-14 82.8 89 56.2
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.6e-14 82.8 47 85.1
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 6.2e-14 80.9 50 86.0
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 6.2e-14 80.9 42 95.2
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 6.2e-14 80.9 88 58.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 1.4e-13 79.7 43 90.7
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 9.0e-13 77.0 41 82.9
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 3.4e-12 75.1 51 70.6
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 6.0e-09 64.3 44 75.0
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 6.0e-09 64.3 44 75.0


User provided reference genes

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