Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 9.7e-89 330.1 164 100.0
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 6.8e-58 227.6 163 72.4
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 6.3e-56 221.1 165 69.1
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-55 220.3 165 69.1
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 7.0e-55 217.6 165 69.1
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.5e-54 215.3 165 68.5
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 5.9e-54 214.5 165 67.9
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 1.5e-52 209.9 166 65.1
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 4.5e-46 188.3 168 60.7
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.7e-45 186.4 166 59.0
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 6.6e-45 184.5 168 59.5
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.1e-44 183.7 168 58.9
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.6e-43 178.7 164 57.9
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 2.3e-42 176.0 166 56.6
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 2.3e-42 176.0 168 54.8
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 5.2e-42 174.9 124 71.8
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 8.9e-42 174.1 165 57.0
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 4.4e-41 171.8 165 58.2
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 2.9e-40 169.1 169 54.4
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 3.7e-40 168.7 165 57.6
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 3.7e-40 168.7 164 56.7
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 6.4e-40 167.9 170 55.3
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.4e-39 166.0 172 53.5
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 1.6e-38 163.3 165 53.9
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 2.0e-38 162.9 162 51.2
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 4.6e-38 161.8 167 54.5
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 7.8e-38 161.0 173 51.4
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 1.7e-37 159.8 184 50.5
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 1.5e-36 156.8 166 53.0
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 2.5e-36 156.0 169 50.3
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 4.3e-36 155.2 166 53.0
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 7.3e-36 154.5 168 51.2
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 1.1e-34 150.6 171 46.8
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.3e-34 149.4 121 59.5
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 5.2e-34 148.3 158 53.2
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 6.8e-34 147.9 125 60.0
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.4e-33 145.6 121 57.9
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 3.4e-33 145.6 166 45.8
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 5.8e-33 144.8 140 54.3
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 7.5e-33 144.4 172 47.1
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 9.8e-33 144.1 172 47.1
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 1.9e-31 139.8 162 51.2
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 3.2e-31 139.0 170 49.4
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 9.2e-31 137.5 159 47.2
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 2.3e-29 132.9 109 60.6
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 5.6e-28 128.3 144 52.8
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 1.2e-27 127.1 153 47.1
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 4.7e-27 125.2 163 46.0
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 1.8e-26 123.2 158 43.0
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 6.8e-26 121.3 143 52.4
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 1.5e-25 120.2 126 51.6
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 2.0e-25 119.8 167 42.5
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 2.6e-25 119.4 167 41.3
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 3.4e-25 119.0 157 38.2
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 4.4e-25 118.6 169 39.6
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 5.8e-25 118.2 143 47.6
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 7.5e-25 117.9 141 44.0
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 7.5e-25 117.9 154 40.9
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 9.9e-25 117.5 125 52.0
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 9.9e-25 117.5 125 52.0
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.3e-24 117.1 127 52.8
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 1.7e-24 116.7 118 49.2
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 2.2e-24 116.3 127 44.9
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 2.9e-24 115.9 127 50.4
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 2.9e-24 115.9 127 50.4
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 6.4e-24 114.8 143 46.9
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 8.3e-24 114.4 119 48.7
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 1.9e-23 113.2 108 51.9
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 2.4e-23 112.8 141 47.5
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.2e-23 112.5 143 46.2
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 5.4e-23 111.7 68 77.9
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 7.1e-23 111.3 135 49.6
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 1.2e-22 110.5 122 49.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.6e-22 110.2 132 44.7
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 1.6e-22 110.2 130 47.7
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 3.5e-22 109.0 124 47.6
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 4.6e-22 108.6 144 44.4
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 4.6e-22 108.6 109 45.0
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 6.0e-22 108.2 138 45.7
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 6.0e-22 108.2 153 42.5
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 1.0e-21 107.5 124 46.8
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.9e-21 105.5 126 45.2
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 3.9e-21 105.5 129 48.1
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 2.5e-20 102.8 126 45.2
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 3.3e-20 102.4 151 41.1
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 1.2e-19 100.5 166 36.1
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.6e-19 100.1 151 40.4
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.1e-19 99.8 70 68.6
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 5.8e-17 91.7 64 65.6
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 4.9e-16 88.6 116 40.5
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 2.4e-15 86.3 165 34.5
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 7.8e-14 81.3 60 63.3
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.3e-13 80.5 136 36.0
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 4.3e-12 75.5 49 71.4
ATR0144G021 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.4e-07 60.5 67 41.8


User provided reference genes

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