Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G072400 Prunus persica HOM05D011519 ORTHO05D010499 3.4e-49 198.0 97 100.0
Prupe.8G072300 Prunus persica HOM05D011519 ORTHO05D010499 1.8e-34 149.1 99 74.7
QL09p042663 Quercus lobata HOM05D009046 ORTHO05D010499 2.6e-17 92.0 78 55.1
QL09p042742 Quercus lobata HOM05D009046 ORTHO05D010499 1.7e-16 89.4 78 53.8
QL09p042668 Quercus lobata HOM05D009046 ORTHO05D010499 3.8e-16 88.2 92 46.7
Prupe.2G131500 Prunus persica HOM05D009046 ORTHO05D010499 6.5e-16 87.4 119 47.1
Cfa015893 Carpinus fangiana HOM05D009046 ORTHO05D010499 1.9e-15 85.9 73 54.8
Prupe.2G131400 Prunus persica HOM05D009046 ORTHO05D010499 9.3e-15 83.6 115 42.6
Prupe.2G131600 Prunus persica HOM05D009046 ORTHO05D010499 1.6e-14 82.8 115 42.6
FAN09G0582 Fragaria x ananassa HOM05D011519 ORTHO05D010499 2.1e-14 82.4 102 42.2
QL07p032500 Quercus lobata HOM05D011519 ORTHO05D010499 3.5e-14 81.6 66 54.5
QL09p025537 Quercus lobata HOM05D009046 ORTHO05D010499 3.5e-14 81.6 96 43.8
QL09p042594 Quercus lobata HOM05D009046 ORTHO05D010499 1.8e-13 79.3 67 55.2
Thecc.04G176200 Theobroma cacao HOM05D009046 ORTHO05D010499 3.0e-13 78.6 97 42.3
Nn2g10332 Nelumbo nucifera HOM05D009046 ORTHO05D010499 5.1e-13 77.8 68 48.5
QL07p032484 Quercus lobata HOM05D009046 ORTHO05D010499 1.9e-12 75.9 66 51.5
FAN09G3689 Fragaria x ananassa HOM05D011519 ORTHO05D010499 7.4e-12 73.9 101 38.6
FAN05G4016 Fragaria x ananassa HOM05D011519 ORTHO05D010499 9.7e-12 73.6 86 46.5
Thecc.04G174900 Theobroma cacao HOM05D009046 ORTHO05D010499 1.3e-11 73.2 92 38.0
Atru.chr2.2398 Acer truncatum HOM05D009046 ORTHO05D010499 2.2e-11 72.4 67 50.7
FAN11G1022 Fragaria x ananassa HOM05D041136 ORTHO05D010499 2.2e-11 72.4 94 46.8
Thecc.04G174700 Theobroma cacao HOM05D009046 ORTHO05D010499 2.2e-11 72.4 92 37.0
FAN08G0905 Fragaria x ananassa HOM05D011519 ORTHO05D010499 8.2e-11 70.5 102 40.2
Cpa.g.sc34.167 Carica papaya HOM05D009046 ORTHO05D010499 1.1e-10 70.1 77 42.9
Cpa.g.c34620 Carica papaya HOM05D009046 ORTHO05D010499 1.8e-10 69.3 68 45.6
FvH4_6g21652 Fragaria vesca HOM05D011519 ORTHO05D010499 1.8e-10 69.3 100 38.0
FAN14G2716 Fragaria x ananassa HOM05D011519 ORTHO05D010499 1.8e-10 69.3 101 38.6
Thecc.04G174500 Theobroma cacao HOM05D009046 ORTHO05D010499 2.4e-10 68.9 67 41.8
Cfa017052 Carpinus fangiana HOM05D009046 ORTHO05D010499 5.3e-10 67.8 68 44.1
Cpa.g.sc3.422 Carica papaya HOM05D009046 ORTHO05D010499 6.9e-10 67.4 67 41.8
Cpa.g.sc76.56 Carica papaya HOM05D009046 ORTHO05D010499 9.0e-10 67.0 81 37.0
Potri.013G054600 Populus trichocarpa HOM05D009046 ORTHO05D010499 9.0e-10 67.0 66 45.5
FAN02G1285 Fragaria x ananassa HOM05D011519 ORTHO05D010499 1.2e-09 66.6 101 39.6
FAN12G0829 Fragaria x ananassa HOM05D011519 ORTHO05D010499 1.5e-09 66.2 104 36.5
FvH4_5g32781 Fragaria vesca HOM05D011519 ORTHO05D010499 2.0e-09 65.9 102 39.2
FAN08G0044 Fragaria x ananassa HOM05D011519 ORTHO05D010499 2.0e-09 65.9 102 39.2
FAN18G2340 Fragaria x ananassa HOM05D011519 ORTHO05D010499 2.6e-09 65.5 101 39.6
FAN25G3136 Fragaria x ananassa HOM05D041136 ORTHO05D010499 7.6e-09 63.9 88 45.5
FAN08G1050 Fragaria x ananassa HOM05D011519 ORTHO05D010499 1.3e-08 63.2 70 45.7
Manes.09G014201 Manihot esculenta HOM05D009046 ORTHO05D010499 1.3e-08 63.2 63 44.4
TAR633G0605 Trochodendron aralioides HOM05D012974 ORTHO05D012969 2.9e-08 62.0 103 33.0
AUR62010343 Chenopodium quinoa HOM05D000057 ORTHO05D000021 3.8e-08 61.6 82 39.0
FAN16G3725 Fragaria x ananassa HOM05D041136 ORTHO05D010499 3.8e-08 61.6 73 50.7
EL10Ac9g22237 Beta vulgaris HOM05D000057 ORTHO05D000021 1.1e-07 60.1 70 44.3
COL.COLO4_20670 Corchorus olitorius HOM05D009046 ORTHO05D010499 1.4e-07 59.7 97 36.1
COL.COLO4_33059 Corchorus olitorius HOM05D009046 ORTHO05D010499 1.4e-07 59.7 104 33.7
FvH4_4g12051 Fragaria vesca HOM05D011519 ORTHO05D010499 1.4e-07 59.7 106 34.0
EL10Ac9g22240 Beta vulgaris HOM05D000057 ORTHO05D000021 2.5e-07 58.9 75 40.0
Ciclev10023880m.g Citrus clementina HOM05D009046 ORTHO05D010499 2.5e-07 58.9 62 45.2
TAR613G0001 Trochodendron aralioides HOM05D009046 ORTHO05D010499 2.5e-07 58.9 86 37.2
COL.COLO4_33068 Corchorus olitorius HOM05D009046 ORTHO05D010499 3.2e-07 58.5 72 38.9
EL10Ac9g22235 Beta vulgaris HOM05D000057 ORTHO05D000021 5.5e-07 57.8 75 40.0
Manes.09G132801 Manihot esculenta HOM05D009046 ORTHO05D010499 5.5e-07 57.8 60 43.3
TAR613G0002 Trochodendron aralioides HOM05D000057 ORTHO05D010499 5.5e-07 57.8 62 45.2
TAR613G0003 Trochodendron aralioides HOM05D000057 ORTHO05D010499 5.5e-07 57.8 62 45.2
EL10Ac9g22238 Beta vulgaris HOM05D000057 ORTHO05D000021 7.2e-07 57.4 77 37.7
AUR62016878 Chenopodium quinoa HOM05D000057 ORTHO05D000021 9.3e-07 57.0 75 37.3
PGSC0003DMG400026712 Solanum tuberosum HOM05D000057 ORTHO05D000021 9.3e-07 57.0 73 37.0
Cpa.g.sc3.420 Carica papaya HOM05D009046 ORTHO05D010499 1.2e-06 56.6 62 43.5
Manes.09G012601 Manihot esculenta HOM05D009046 ORTHO05D010499 1.2e-06 56.6 56 42.9
Aqoxy2G01399 Aquilegia oxysepala HOM05D000057 ORTHO05D000021 1.6e-06 56.2 99 34.3
AUR62010344 Chenopodium quinoa HOM05D000057 ORTHO05D000021 1.6e-06 56.2 75 37.3
Sc08g0001180 Simmondsia chinensis HOM05D000057 ORTHO05D000021 1.6e-06 56.2 67 43.3
Cpa.g.sc48.221 Carica papaya HOM05D009046 ORTHO05D010499 2.1e-06 55.8 60 38.3
Nitab4.5_0007761g0010 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.1e-06 55.8 73 37.0
Solyc10g054760.1 Solanum lycopersicum HOM05D000057 ORTHO05D000021 2.7e-06 55.5 73 38.4
Nitab4.5_0007761g0020 Nicotiana tabacum HOM05D000057 ORTHO05D023365 3.6e-06 55.1 80 36.2
TAR633G0276 Trochodendron aralioides HOM05D012974 ORTHO05D012969 3.6e-06 55.1 101 32.7
Sc08g0001170 Simmondsia chinensis HOM05D000057 ORTHO05D000021 4.6e-06 54.7 67 40.3
TAR636G3259 Trochodendron aralioides HOM05D000057 ORTHO05D010499 4.6e-06 54.7 62 41.9
Migut.B00159 Erythranthe guttata HOM05D000057 ORTHO05D000021 6.1e-06 54.3 75 37.3
Sc08g0001060 Simmondsia chinensis HOM05D000057 ORTHO05D000021 6.1e-06 54.3 76 34.2
MBI13_g31560_MAGBIO Magnolia biondii HOM05D000204 ORTHO05D000021 7.9e-06 53.9 67 35.8
Nitab4.5_0007293g0010 Nicotiana tabacum HOM05D000057 ORTHO05D023365 7.9e-06 53.9 73 37.0


User provided reference genes

Program Settings