Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 2.0e-228 795.4 402 100.0
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.5e-167 593.2 403 76.7
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 7.5e-167 590.9 400 78.5
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 1.2e-153 547.0 420 70.0
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 1.6e-153 546.6 405 72.6
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 3.6e-153 545.4 392 70.7
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 6.1e-153 544.7 393 72.3
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.3e-142 510.4 367 71.4
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 4.1e-141 505.4 398 65.8
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 3.6e-137 492.3 405 65.2
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.4e-136 490.3 392 66.1
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 6.8e-136 488.0 395 65.3
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 2.6e-135 486.1 398 66.6
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 3.4e-135 485.7 319 76.2
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 4.4e-135 485.3 382 67.5
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.8e-135 484.2 416 63.7
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.7e-134 483.4 416 63.2
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 6.4e-134 481.5 400 63.2
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.4e-133 480.3 311 78.1
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 2.4e-133 479.6 407 62.7
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.2e-133 479.2 392 66.8
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.6e-132 476.9 403 64.3
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 1.3e-131 473.8 396 63.1
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 1.7e-131 473.4 392 64.8
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.7e-131 473.4 349 71.9
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.7e-131 473.4 364 69.8
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 5.0e-131 471.9 395 62.8
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 8.6e-131 471.1 399 62.7
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.5e-130 470.3 397 64.2
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 2.5e-130 469.5 389 63.5
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.5e-130 469.5 399 63.7
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 5.6e-130 468.4 388 63.4
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 5.6e-130 468.4 355 70.4
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.2e-129 467.2 398 63.8
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.6e-129 466.8 399 62.9
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 3.6e-129 465.7 358 67.6
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 3.6e-129 465.7 396 63.4
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 1.4e-128 463.8 347 68.3
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.8e-128 463.4 323 74.6
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.1e-128 462.6 401 63.1
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 3.1e-128 462.6 378 63.5
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 2.6e-127 459.5 396 63.9
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 3.4e-127 459.1 378 64.3
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 4.4e-127 458.8 392 62.0
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 9.8e-127 457.6 341 71.3
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 2.2e-126 456.4 341 70.7
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 2.9e-126 456.1 361 67.0
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 2.9e-126 456.1 352 67.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 6.4e-126 454.9 388 61.3
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 6.4e-126 454.9 303 74.3
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.9e-125 453.4 396 60.4
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.6e-124 450.3 318 72.6
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 3.5e-124 449.1 387 62.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.6e-124 448.7 322 72.0
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 6.0e-124 448.4 352 68.8
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 1.7e-123 446.8 349 67.0
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 5.1e-123 445.3 313 71.6
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.5e-122 443.0 401 60.6
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.8e-121 439.5 388 60.3
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 8.1e-121 438.0 385 60.5
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 8.1e-121 438.0 327 68.8
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 5.2e-120 435.3 320 68.4
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 6.8e-120 434.9 362 62.7
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 4.4e-119 432.2 387 59.7
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 4.4e-119 432.2 386 61.1
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.3e-118 430.6 443 55.1
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.7e-118 430.3 385 59.5
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 4.9e-118 428.7 316 69.0
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 1.9e-117 426.8 359 63.2
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.4e-117 426.4 392 61.2
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 3.2e-117 426.0 385 59.2
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 3.5e-116 422.5 395 60.8
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.5e-116 422.5 331 67.4
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 3.0e-115 419.5 306 69.9
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 6.6e-115 418.3 310 69.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 8.6e-115 417.9 315 67.6
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 1.1e-114 417.5 290 72.8
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 4.3e-114 415.6 306 68.6
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 1.2e-113 414.1 315 67.3
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.2e-113 414.1 315 67.3
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 3.6e-113 412.5 304 69.7
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 4.7e-113 412.1 281 74.4
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 4.0e-112 409.1 297 70.0
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 5.8e-111 405.2 300 71.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 9.3e-109 397.9 300 67.3
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 4.6e-108 395.6 307 65.5
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.0e-107 394.4 359 59.1
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 5.1e-107 392.1 465 50.1
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 7.3e-106 388.3 307 63.2
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.4e-104 384.0 410 51.2
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 2.0e-103 380.2 319 63.0
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 1.3e-97 360.9 302 62.6
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 2.8e-97 359.8 311 58.8
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 4.8e-97 359.0 307 61.9
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 2.4e-96 356.7 311 57.9
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 4.0e-96 355.9 257 72.8
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.1e-93 347.8 339 55.8
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 5.5e-93 345.5 319 58.6
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.6e-92 342.4 275 61.8
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 7.4e-90 335.1 270 64.4
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.3e-89 334.3 285 60.7
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 4.0e-88 329.3 392 51.8
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 9.6e-82 308.1 229 70.7
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 8.2e-81 305.1 228 68.0
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.0e-79 300.4 196 75.5
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 1.3e-75 287.7 213 67.6
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.8e-73 279.3 293 55.3
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.5e-71 272.7 334 47.9
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.8e-65 252.7 314 46.8
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 4.1e-64 249.6 277 48.4
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.5e-61 240.4 299 46.8
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.7e-58 229.2 175 62.9
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 5.7e-50 202.6 349 39.5
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.8e-49 200.3 277 45.1
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 1.3e-41 174.9 130 65.4
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 2.7e-31 140.6 103 67.0
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 2.7e-31 140.6 103 67.0
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 2.8e-28 130.6 107 63.6
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.3e-25 121.7 94 63.8
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.5e-23 113.6 98 62.2
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 3.5e-23 113.6 98 62.2
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.3e-22 111.7 98 61.2
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 9.5e-21 105.5 90 58.9
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.7e-15 87.4 54 72.2
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.5e-15 87.0 96 55.2
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 8.9e-11 72.4 64 57.8
Eucgr.G00935 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.2e-10 72.0 113 42.5


User provided reference genes

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