Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.5e-127 459.5 230 100.0
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.4e-122 443.0 227 98.7
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 2.2e-102 375.9 219 87.7
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 6.9e-101 370.9 222 85.1
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.7e-99 366.3 219 84.5
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.7e-99 366.3 219 84.5
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 9.4e-98 360.5 219 84.0
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 2.0e-95 352.8 219 79.9
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 5.7e-95 351.3 219 79.9
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.4e-95 350.9 219 79.9
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 9.7e-95 350.5 219 79.9
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 2.2e-94 349.4 221 76.9
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.8e-94 349.0 221 78.3
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.8e-94 349.0 218 79.8
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.7e-94 348.6 219 79.5
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 4.8e-94 348.2 221 77.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 4.8e-94 348.2 221 77.4
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.1e-93 345.5 224 75.9
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 5.3e-93 344.7 221 75.1
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 7.0e-93 344.4 219 79.0
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 2.0e-92 342.8 219 78.5
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 2.6e-92 342.4 219 78.1
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.5e-92 342.0 221 77.4
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 4.5e-92 341.7 214 80.4
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 5.9e-92 341.3 219 78.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.9e-92 341.3 219 78.1
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 5.9e-92 341.3 218 78.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.7e-92 340.9 220 76.8
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.7e-92 340.9 220 76.8
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 7.7e-92 340.9 219 76.3
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 7.7e-92 340.9 218 77.5
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 7.7e-92 340.9 219 77.6
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 7.7e-92 340.9 221 76.9
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.0e-91 340.5 215 78.6
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.0e-91 340.5 218 77.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.3e-91 340.1 221 76.0
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.3e-91 340.1 226 74.3
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 1.3e-91 340.1 226 74.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.3e-91 340.1 220 77.3
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.7e-91 339.7 220 75.5
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.7e-91 339.7 221 76.5
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 2.9e-91 339.0 220 75.9
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 3.8e-91 338.6 216 78.2
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 5.0e-91 338.2 220 76.4
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 5.0e-91 338.2 220 76.4
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 6.5e-91 337.8 218 76.1
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 6.5e-91 337.8 218 77.5
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 8.5e-91 337.4 221 76.0
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.1e-90 337.0 219 77.2
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.1e-90 337.0 219 78.5
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 2.5e-90 335.9 220 75.5
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.5e-90 335.9 220 75.0
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 3.2e-90 335.5 219 74.9
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 3.2e-90 335.5 219 74.9
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.2e-90 335.5 221 76.5
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 4.2e-90 335.1 220 75.9
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 5.5e-90 334.7 219 75.3
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 7.2e-90 334.3 221 75.1
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 9.4e-90 334.0 220 77.3
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.2e-89 333.6 221 74.7
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 3.6e-89 332.0 220 74.1
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 6.1e-89 331.3 215 77.2
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 8.0e-89 330.9 222 73.9
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.0e-88 330.5 219 73.5
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.3e-88 329.3 217 74.7
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 3.0e-88 328.9 220 75.0
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 5.2e-88 328.2 221 72.4
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 5.2e-88 328.2 215 74.4
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.1e-87 327.0 216 77.3
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.5e-87 326.6 222 73.0
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 2.6e-87 325.9 219 74.0
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 3.3e-87 325.5 255 66.3
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 4.4e-87 325.1 211 74.9
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.8e-86 322.4 219 73.1
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 6.3e-86 321.2 220 71.8
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.8e-85 319.7 220 72.3
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.8e-85 319.7 220 72.3
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 2.4e-85 319.3 219 72.6
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 7.0e-85 317.8 222 71.6
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.6e-84 316.6 222 72.1
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-84 316.6 214 73.8
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 2.6e-84 315.8 220 72.3
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 4.5e-84 315.1 219 69.9
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 4.5e-84 315.1 219 71.2
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.7e-83 313.2 219 73.1
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 2.2e-83 312.8 202 75.2
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.5e-82 310.1 219 73.5
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.9e-82 309.7 230 69.6
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.2e-82 308.9 230 69.1
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.6e-81 306.6 220 70.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.2e-79 300.4 220 70.9
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 5.7e-79 298.1 202 71.3
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.7e-78 296.6 216 68.5
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.2e-78 296.2 291 56.7
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.8e-78 295.8 214 70.6
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.5e-74 283.5 198 69.2
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.6e-73 278.9 220 65.0
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 5.4e-69 265.0 223 59.6
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 8.0e-65 251.1 197 66.5
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.0e-64 250.8 179 75.4
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 6.8e-64 248.1 214 58.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.5e-63 246.9 215 60.5
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 5.7e-63 245.0 224 59.4
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 9.8e-63 244.2 139 84.9
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 9.8e-63 244.2 215 60.0
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.6e-60 236.9 219 56.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.0e-60 236.5 214 57.0
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 7.8e-60 234.6 219 60.3
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-59 234.2 214 55.1
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 6.6e-59 231.5 214 55.6
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 8.6e-59 231.1 214 54.7
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-58 230.7 214 53.3
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.5e-58 230.3 217 59.4
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-58 230.3 214 53.3
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 2.5e-58 229.6 150 74.0
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-56 221.9 222 53.2
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.4e-55 219.2 213 53.1
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 4.4e-55 218.8 153 69.3
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.9e-54 216.1 215 52.1
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-54 216.1 214 52.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-53 213.8 223 52.0
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 3.2e-53 212.6 173 65.9
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 5.4e-53 211.8 215 49.8
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 4.6e-52 208.8 214 50.0
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-51 207.2 214 50.0
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-51 207.2 214 49.5
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-50 203.4 225 48.9
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-50 202.6 215 50.7
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 4.7e-49 198.7 225 47.6
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 4.4e-47 192.2 195 49.2
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.8e-47 191.8 124 73.4
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.2e-46 189.9 179 54.2
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-45 185.7 176 50.6
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-45 185.7 196 49.5
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 3.0e-43 179.5 129 71.3
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 5.1e-43 178.7 129 72.9
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 1.2e-39 167.5 165 52.7
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-37 160.6 149 53.7
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 7.3e-34 148.3 100 73.0
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 7.3e-26 121.7 211 38.9
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 5.3e-24 115.5 102 55.9
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 3.4e-23 112.8 74 64.9
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.0e-19 101.3 215 34.9
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 5.6e-18 95.5 65 78.5
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.6e-17 94.0 61 82.0
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.6e-17 94.0 231 32.0
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.1e-17 93.6 227 31.7
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.1e-17 93.6 216 31.9
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 5.3e-16 89.0 70 65.7
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 9.0e-16 88.2 53 84.9
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-15 86.3 73 57.5
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.2e-13 79.7 83 51.8
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.2e-13 79.3 219 29.7
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 1.3e-11 74.3 89 47.2
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 5.1e-11 72.4 92 43.5
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.5e-10 70.1 93 46.2
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.5e-10 70.1 147 34.0
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 4.0e-08 62.8 208 28.8
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 3.4e-07 59.7 96 38.5


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