Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 6.2e-86 320.9 174 100.0
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.0e-28 129.8 177 48.0
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 3.3e-26 122.5 186 44.1
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 5.2e-24 115.2 165 42.4
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 6.8e-24 114.8 177 42.4
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.1e-21 107.5 175 49.7
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.8e-21 106.7 187 42.2
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 3.1e-21 105.9 179 44.1
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.1e-21 105.9 180 38.9
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 4.1e-21 105.5 185 42.2
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 9.2e-21 104.4 188 39.4
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 2.0e-20 103.2 176 39.8
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 2.0e-20 103.2 180 38.3
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 4.5e-20 102.1 181 45.3
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 5.9e-20 101.7 161 44.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 5.9e-20 101.7 178 40.4
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 8.6e-19 97.8 179 40.8
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 1.1e-18 97.4 169 41.4
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 9.5e-18 94.4 169 39.1
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.8e-17 92.8 171 36.8
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 2.8e-17 92.8 175 37.1
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 4.7e-17 92.0 180 38.3
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 6.1e-17 91.7 181 44.2
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 6.1e-17 91.7 171 37.4
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 8.0e-17 91.3 183 37.2
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 4.0e-16 89.0 169 38.5
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 4.0e-16 89.0 169 38.5
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 5.2e-16 88.6 186 37.6
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 8.9e-16 87.8 176 35.2
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 3.4e-15 85.9 190 42.1
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 5.8e-15 85.1 181 34.8
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 7.5e-15 84.7 170 35.3
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.7e-14 83.6 181 41.4
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.7e-14 83.6 171 35.1
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 4.9e-14 82.0 188 33.0
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 8.3e-14 81.3 176 39.2
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 1.1e-13 80.9 183 35.0
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.4e-13 80.5 172 36.0
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 1.8e-13 80.1 171 33.3
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 2.4e-13 79.7 176 43.2
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 2.4e-13 79.7 175 34.9
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 3.2e-13 79.3 155 38.1
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 4.1e-13 79.0 157 36.3
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 5.4e-13 78.6 157 42.0
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 7.0e-13 78.2 184 33.2
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 1.6e-12 77.0 182 36.3
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 4.6e-12 75.5 169 33.1
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 4.6e-12 75.5 157 36.3
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 6.0e-12 75.1 181 31.5
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 1.0e-11 74.3 172 35.5
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 2.3e-11 73.2 167 29.9
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 3.0e-11 72.8 163 35.6
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 3.9e-11 72.4 172 33.1
CsaV3_2G033460 Cucumis sativus L. HOM05D030816 ORTHO05D028878 8.6e-11 71.2 173 34.1
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 8.6e-11 71.2 157 34.4
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 1.5e-10 70.5 121 40.5
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 2.5e-10 69.7 183 32.8
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 4.3e-10 68.9 121 40.5
MELO3C008117.2 Cucumis melo HOM05D030816 ORTHO05D028878 5.6e-10 68.6 173 33.5
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 5.6e-10 68.6 198 31.8
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 7.3e-10 68.2 182 31.3
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 9.5e-10 67.8 179 29.6
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 9.5e-10 67.8 179 29.6
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 2.8e-09 66.2 171 33.3
Carub.0002s1869 Capsella rubella HOM05D010479 ORTHO05D007393 3.6e-09 65.9 184 29.3
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 4.7e-09 65.5 179 32.4
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 6.2e-09 65.1 175 30.9
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 8.0e-09 64.7 171 30.4
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 1.4e-08 63.9 172 30.2
ClCG11G008210 Citrullus lanatus HOM05D030816 ORTHO05D028878 1.8e-08 63.5 86 45.3
FAN20G0410 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.3e-08 63.2 144 40.3
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 3.1e-08 62.8 174 31.6
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 3.1e-08 62.8 180 33.9
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 3.1e-08 62.8 205 28.3
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 4.0e-08 62.4 166 31.9
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 5.2e-08 62.0 179 32.4
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 5.2e-08 62.0 171 32.2
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 6.8e-08 61.6 179 30.7
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 6.8e-08 61.6 179 30.7
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 1.2e-07 60.8 184 28.8
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 1.2e-07 60.8 107 38.3
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 1.5e-07 60.5 186 29.0
BcaB05g24691 Brassica carinata HOM05D010479 ORTHO05D007393 1.5e-07 60.5 176 30.1
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 1.5e-07 60.5 184 31.0
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 1.5e-07 60.5 180 30.0
SGA_v2.0_scaffold118G32471 Striga asiatica HOM05D007935 ORTHO05D007393 3.4e-07 59.3 171 26.3
Migut.N03344 Erythranthe guttata HOM05D007935 ORTHO05D007393 9.8e-07 57.8 179 29.6
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 9.8e-07 57.8 142 36.6
SGA_v2.0_scaffold24G10552 Striga asiatica HOM05D007935 ORTHO05D007393 9.8e-07 57.8 83 39.8
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 9.8e-07 57.8 180 30.6
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 1.7e-06 57.0 94 39.4
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 2.2e-06 56.6 175 29.7
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 2.9e-06 56.2 148 36.5
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 2.9e-06 56.2 173 30.1
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 2.9e-06 56.2 170 32.9
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 4.9e-06 55.5 173 30.1
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 6.4e-06 55.1 175 29.1
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 6.4e-06 55.1 184 31.0
Phvul.007G090200 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 6.4e-06 55.1 170 31.8
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 8.3e-06 54.7 123 32.5
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 8.3e-06 54.7 179 30.7
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 8.3e-06 54.7 117 39.3


User provided reference genes

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