Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G055600 Prunus persica HOM05D005071 ORTHO05D006069 2.7e-52 208.4 105 100.0
Glyma.08G057251 Glycine max HOM05D005071 ORTHO05D006069 7.4e-34 147.1 105 71.4
Prupe.5G240500 Prunus persica HOM05D005071 ORTHO05D006069 1.7e-30 136.0 76 88.2
arahy.Tifrunner.gnm1.ann1.ESBK1T Arachis hypogaea HOM05D005071 ORTHO05D006069 8.0e-28 127.1 76 78.9
CiPaw.16G099900 Carya illinoinensis HOM05D005071 ORTHO05D006069 1.4e-27 126.3 76 77.6
MD14G1242800 Malus domestica HOM05D005071 ORTHO05D006069 1.4e-27 126.3 68 83.8
Haze_18981 Corylus avellana HOM05D005071 ORTHO05D006069 2.3e-27 125.6 68 83.8
CiPaw.16G100100 Carya illinoinensis HOM05D005071 ORTHO05D006069 3.0e-27 125.2 76 77.6
Gohir.A11G001600 Gossypium hirsutum HOM05D005071 ORTHO05D006069 5.2e-27 124.4 76 75.0
Atru.chr9.1568 Acer truncatum HOM05D005071 ORTHO05D006069 6.7e-27 124.0 76 80.3
Duzib068G1262 Durio zibethinus HOM05D005071 ORTHO05D006069 6.7e-27 124.0 76 75.0
Thecc.03G069100 Theobroma cacao HOM05D005071 ORTHO05D006069 6.7e-27 124.0 76 75.0
Cpa.g.sc7.143 Carica papaya HOM05D005071 ORTHO05D006069 8.8e-27 123.6 76 77.6
Cfa020677 Carpinus fangiana HOM05D005071 ORTHO05D006069 1.1e-26 123.2 76 77.6
Gorai.007G002100 Gossypium raimondii HOM05D005071 ORTHO05D006069 2.0e-26 122.5 76 73.7
TWI81G0487 Tripterygium wilfordii HOM05D005071 ORTHO05D006069 2.6e-26 122.1 76 76.3
Phvul.002G332800 Phaseolus vulgaris HOM05D005071 ORTHO05D006069 4.4e-26 121.3 76 75.0
MBI19_g02947_MAGBIO Magnolia biondii HOM05D005071 ORTHO05D006069 5.7e-26 120.9 76 73.7
MBI19_g46696_MAGBIO Magnolia biondii HOM05D005071 ORTHO05D006069 5.7e-26 120.9 76 73.7
TPR.G1402 Trifolium pratense HOM05D005071 ORTHO05D006069 5.7e-26 120.9 76 75.0
Eucgr.H00596 Eucalyptus grandis HOM05D005071 ORTHO05D006069 7.5e-26 120.6 76 69.7
Potri.012G038900 Populus trichocarpa HOM05D005071 ORTHO05D006069 7.5e-26 120.6 76 75.0
QL10p032932 Quercus lobata HOM05D005071 ORTHO05D006069 7.5e-26 120.6 75 73.3
QL10p033020 Quercus lobata HOM05D005071 ORTHO05D006069 7.5e-26 120.6 75 73.3
Glyma.05G248600 Glycine max HOM05D005071 ORTHO05D006069 1.3e-25 119.8 76 75.0
Gohir.D11G001200 Gossypium hirsutum HOM05D005071 ORTHO05D006069 1.3e-25 119.8 76 71.1
Medtr8g107670 Medicago truncatula HOM05D005071 ORTHO05D006069 1.3e-25 119.8 76 73.7
FAN08G1527 Fragaria x ananassa HOM05D005071 ORTHO05D006069 2.2e-25 119.0 76 77.6
TAR622G0642 Trochodendron aralioides HOM05D005071 ORTHO05D006069 2.2e-25 119.0 76 76.3
VMungo0251G2121 Vigna mungo HOM05D005071 ORTHO05D006069 2.2e-25 119.0 76 73.7
Ciclev10024301m.g Citrus clementina HOM05D005071 ORTHO05D006069 2.8e-25 118.6 76 73.7
MELO3C001942.2 Cucumis melo HOM05D005071 ORTHO05D006069 2.8e-25 118.6 76 71.1
PGR083G1095 Punica granatum HOM05D005071 ORTHO05D006069 2.8e-25 118.6 76 71.1
FvH4_5g18030 Fragaria vesca HOM05D005071 ORTHO05D006069 3.7e-25 118.2 76 77.6
LjContig00484g0022264 Lotus japonicus HOM05D005071 ORTHO05D006069 3.7e-25 118.2 76 72.4
Peaxi162Scf00171g00532 Petunia axillaris HOM05D005071 ORTHO05D006069 3.7e-25 118.2 76 71.1
CANSAT80G1805 Cannabis sativa HOM05D005071 ORTHO05D006069 4.8e-25 117.9 76 73.7
Os02g0773300 Oryza sativa ssp. japonica HOM05D005071 ORTHO05D006069 4.8e-25 117.9 68 75.0
RcHm_v2.0_Chr7g0177581 Rosa chinensis HOM05D005071 ORTHO05D006069 4.8e-25 117.9 76 78.9
Actinidia17702 Actinidia chinensis HOM05D005071 ORTHO05D006069 6.3e-25 117.5 76 69.7
MSTRG.23199 Avicennia marina HOM05D005071 ORTHO05D006069 6.3e-25 117.5 76 71.1
Nitab4.5_0001180g0110 Nicotiana tabacum HOM05D005071 ORTHO05D006069 6.3e-25 117.5 76 71.1
THA.LOC104820332 Tarenaya hassleriana HOM05D005071 ORTHO05D006069 6.3e-25 117.5 76 73.7
CAN.G637.11 Capsicum annuum HOM05D005071 ORTHO05D006069 8.2e-25 117.1 76 71.1
Sed0005435 Sechium edule HOM05D005071 ORTHO05D006069 8.2e-25 117.1 76 71.1
FAN04G0665 Fragaria x ananassa HOM05D005071 ORTHO05D006069 1.1e-24 116.7 76 76.3
FAN13G1354 Fragaria x ananassa HOM05D005071 ORTHO05D006069 1.1e-24 116.7 76 76.3
Peaxi162Scf00171g00533 Petunia axillaris HOM05D005071 ORTHO05D006069 1.1e-24 116.7 76 69.7
Sabra12G0027400 Salix brachista HOM05D005071 ORTHO05D006069 1.1e-24 116.7 76 72.4
CsaV3_1G005050 Cucumis sativus L. HOM05D005071 ORTHO05D006069 1.4e-24 116.3 76 69.7
FAN18G3456 Fragaria x ananassa HOM05D005071 ORTHO05D006069 1.4e-24 116.3 75 76.0
Hma1.2p1_0493F.1_g165090 Hydrangea macrophylla HOM05D005071 ORTHO05D006069 1.4e-24 116.3 76 69.7
PGSC0003DMG400031041 Solanum tuberosum HOM05D005071 ORTHO05D006069 1.4e-24 116.3 76 68.4
BcaB07g33760 Brassica carinata HOM05D005071 ORTHO05D006069 1.8e-24 115.9 87 64.4
Lj5C165T19 Lonicera japonica HOM05D005071 ORTHO05D006069 1.8e-24 115.9 76 67.1
MD06G1235700 Malus domestica HOM05D005071 ORTHO05D006069 1.8e-24 115.9 77 75.3
Lalb_Chr09g0330201 Lupinus albus HOM05D005071 ORTHO05D006069 2.4e-24 115.5 76 72.4
Aa31LG10G5350 Aethionema arabicum HOM05D005071 ORTHO05D006069 3.1e-24 115.2 76 71.1
A06p04490 Brassica napus HOM05D005071 ORTHO05D006069 3.1e-24 115.2 87 64.4
BraA06t23653Z Brassica rapa HOM05D005071 ORTHO05D006069 3.1e-24 115.2 87 64.4
Peaxi162Scf00171g00530 Petunia axillaris HOM05D005071 ORTHO05D006069 3.1e-24 115.2 76 68.4
Solyc03g098230.3 Solanum lycopersicum HOM05D005071 ORTHO05D006069 3.1e-24 115.2 76 68.4
Sopen03g028930 Solanum pennellii HOM05D005071 ORTHO05D006069 3.1e-24 115.2 76 68.4
SGA_v2.0_scaffold25G10767 Striga asiatica HOM05D005071 ORTHO05D006069 3.1e-24 115.2 87 60.9
Aqoxy3G04133 Aquilegia oxysepala HOM05D005071 ORTHO05D006069 4.1e-24 114.8 76 69.7
Nitab4.5_0003066g0040 Nicotiana tabacum HOM05D005071 ORTHO05D006069 4.1e-24 114.8 76 69.7
BcaC08g43037 Brassica carinata HOM05D005071 ORTHO05D006069 5.3e-24 114.4 87 63.2
Thhalv10011539m.g Eutrema salsugineum HOM05D005071 ORTHO05D006069 5.3e-24 114.4 76 69.7
Psat7g000520 Pisum sativum HOM05D005071 ORTHO05D006069 5.3e-24 114.4 76 69.7
THA.LOC104809825 Tarenaya hassleriana HOM05D005071 ORTHO05D006069 5.3e-24 114.4 74 73.0
C06p02970 Brassica napus HOM05D005071 ORTHO05D006069 7.0e-24 114.0 76 68.4
BolC6t35420H Brassica oleracea HOM05D005071 ORTHO05D006069 7.0e-24 114.0 76 68.4
arahy.Tifrunner.gnm1.ann1.ZJN9EZ Arachis hypogaea HOM05D005071 ORTHO05D006069 9.1e-24 113.6 69 76.8
Carub.0001s3754 Capsella rubella HOM05D005071 ORTHO05D006069 9.1e-24 113.6 76 69.7
Dinv06025 Davidia involucrata HOM05D005071 ORTHO05D006069 9.1e-24 113.6 76 68.4
Dinv17781 Davidia involucrata HOM05D005071 ORTHO05D006069 9.1e-24 113.6 76 68.4
Lsat_1_v5_gn_0_10481 Lactuca sativa HOM05D005071 ORTHO05D006069 9.1e-24 113.6 76 68.4
GSVIVG01000389001 Vitis vinifera HOM05D005071 ORTHO05D006069 9.1e-24 113.6 76 68.4
Aqoxy3G01487 Aquilegia oxysepala HOM05D005071 ORTHO05D006069 1.2e-23 113.2 68 73.5
CDE05G0597 Ceratophyllum demersum HOM05D005071 ORTHO05D006069 1.2e-23 113.2 76 67.1
Haze_18975 Corylus avellana HOM05D000565 ORTHO05D006069 1.2e-23 113.2 63 81.0
HanXRQChr16g0503311 Helianthus annuus HOM05D005071 ORTHO05D006069 1.2e-23 113.2 76 69.7
Sp1g35370 Schrenkiella parvula HOM05D005071 ORTHO05D006069 1.2e-23 113.2 76 68.4
CARHR038040 Cardamine hirsuta HOM05D005071 ORTHO05D006069 2.0e-23 112.5 76 68.4
AT1G48420 Arabidopsis thaliana HOM05D005071 ORTHO05D006069 2.7e-23 112.1 76 68.4
Cc04_g09040 Coffea canephora HOM05D005071 ORTHO05D006069 2.7e-23 112.1 76 71.1
Zm00001eb256470 Zea mays HOM05D005071 ORTHO05D006069 2.7e-23 112.1 68 69.1
EL10Ac8g19579 Beta vulgaris HOM05D005071 ORTHO05D006069 3.5e-23 111.7 76 65.8
AL1G55050 Arabidopsis lyrata HOM05D005071 ORTHO05D006069 4.5e-23 111.3 76 67.1
ECA232G0859 Erigeron canadensis HOM05D005071 ORTHO05D006069 4.5e-23 111.3 74 70.3
PSO063G6091 Papaver somniferum HOM05D005071 ORTHO05D006069 5.9e-23 110.9 76 71.1
AUR62042043 Chenopodium quinoa HOM05D005071 ORTHO05D006069 7.7e-23 110.5 76 63.2
Oeu038408.4 Olea europaea HOM05D005071 ORTHO05D006069 1.0e-22 110.2 76 63.2
DCAR_013703 Daucus carota HOM05D005071 ORTHO05D006069 1.3e-22 109.8 76 67.1
Migut.O00239 Erythranthe guttata HOM05D005071 ORTHO05D006069 2.9e-22 108.6 68 69.1
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 3.8e-22 108.2 69 73.9
PSO782G2673 Papaver somniferum HOM05D005071 ORTHO05D006069 3.8e-22 108.2 76 69.7
AUR62038575 Chenopodium quinoa HOM05D005071 ORTHO05D006069 5.0e-22 107.8 76 60.5
unitig_750.g28458 Utricularia gibba HOM05D005071 ORTHO05D006069 8.5e-22 107.1 104 53.8
Rhsim08G0124200 Rhododendron simsii HOM05D005071 ORTHO05D006069 1.5e-21 106.3 76 67.1
SalBow5G4817 Salvia bowleyana HOM05D005071 ORTHO05D006069 7.2e-21 104.0 58 77.6
ATR0598G263 Amborella trichopoda HOM05D005071 ORTHO05D006069 9.4e-21 103.6 94 55.3
TWI81G0721 Tripterygium wilfordii HOM05D005071 ORTHO05D006069 9.4e-21 103.6 68 73.5
Actinidia06302 Actinidia chinensis HOM05D005071 ORTHO05D006069 1.6e-20 102.8 73 67.1
HPP92_009318 Vanilla planifolia HOM05D005071 ORTHO05D006069 6.1e-20 100.9 76 60.5
Sc24g0002670 Simmondsia chinensis HOM05D005071 ORTHO05D006069 5.2e-19 97.8 68 63.2
SEGI_13462 Sequoiadendron giganteum HOM05D005071 ORTHO05D006069 8.8e-19 97.1 76 57.9
Sc24g0002660 Simmondsia chinensis HOM05D005071 ORTHO05D006069 2.0e-18 95.9 68 63.2
Sed0017671 Sechium edule HOM05D005071 ORTHO05D006069 2.6e-18 95.5 63 68.3
CSS0029252 Camellia sinensis var. sinensis HOM05D005071 ORTHO05D006069 1.3e-17 93.2 70 61.4
Pp3c15_20550 Physcomitrium patens HOM05D005071 ORTHO05D006069 1.4e-16 89.7 80 55.0
CDE11G0073 Ceratophyllum demersum HOM05D005071 ORTHO05D006069 2.7e-15 85.5 63 63.5
SalBow5G0201 Salvia bowleyana HOM05D005071 ORTHO05D006069 7.7e-15 84.0 61 62.3
Aqoxy3G04132 Aquilegia oxysepala HOM05D005071 ORTHO05D006069 5.0e-14 81.3 89 47.2
SMO364G0181 Selaginella moellendorffii HOM05D005071 ORTHO05D006069 1.9e-13 79.3 61 57.4
Mapoly0080s0004 Marchantia polymorpha HOM05D005071 ORTHO05D006069 8.8e-11 70.5 51 58.8
MCO03G464 Micromonas commoda HOM05D005071 ORTHO05D006069 7.0e-08 60.8 58 43.1
FvH4_5g18020 Fragaria vesca HOM05D005071 ORTHO05D006069 9.2e-08 60.5 33 78.8


User provided reference genes

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