Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 8.5e-134 480.3 242 100.0
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.2e-90 337.0 244 75.4
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.7e-79 299.3 178 84.3
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 9.6e-77 290.8 178 80.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.1e-71 273.1 223 65.9
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.5e-66 256.9 194 67.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.6e-66 256.1 229 59.0
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.3e-65 253.8 178 68.0
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.2e-65 253.1 241 56.8
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.9e-65 252.7 191 65.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 6.5e-65 251.5 182 68.1
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 6.5e-65 251.5 169 72.2
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.1e-64 250.8 211 60.7
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.9e-64 250.0 203 64.5
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 4.2e-64 248.8 173 70.5
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 5.5e-64 248.4 185 66.5
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 7.1e-64 248.1 223 58.3
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.6e-63 246.9 173 71.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 4.6e-63 245.4 165 70.9
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 6.0e-63 245.0 238 55.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 6.0e-63 245.0 194 64.9
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 1.0e-62 244.2 166 71.1
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.8e-62 243.4 249 53.8
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.8e-62 243.4 166 71.7
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 3.0e-62 242.7 177 65.5
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 8.7e-62 241.1 222 58.6
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 8.7e-62 241.1 228 53.9
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.5e-61 240.4 172 63.4
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.9e-61 240.0 173 65.9
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 7.4e-61 238.0 186 64.0
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 9.6e-61 237.7 231 52.8
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.3e-60 237.3 192 62.0
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.3e-60 237.3 168 67.3
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.3e-60 237.3 178 64.6
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 2.8e-60 236.1 161 71.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.8e-60 236.1 206 56.8
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.7e-60 235.7 231 52.4
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 6.2e-60 235.0 177 66.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 8.2e-60 234.6 192 58.9
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.1e-59 234.2 192 58.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 3.1e-59 232.6 229 52.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 3.1e-59 232.6 251 49.8
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 4.1e-59 232.3 167 64.1
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 5.3e-59 231.9 166 66.9
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 6.9e-59 231.5 186 59.1
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 6.9e-59 231.5 194 58.8
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 9.0e-59 231.1 188 59.6
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 9.0e-59 231.1 226 53.1
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.5e-58 230.3 175 61.1
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.5e-58 230.3 153 71.9
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.0e-58 229.9 163 67.5
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 2.6e-58 229.6 170 62.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.6e-58 229.6 217 53.0
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 2.6e-58 229.6 168 64.9
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 5.8e-58 228.4 170 60.6
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.0e-57 227.6 215 54.0
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 2.2e-57 226.5 173 60.1
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 2.2e-57 226.5 205 53.7
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 2.2e-57 226.5 175 59.4
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 2.9e-57 226.1 162 65.4
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.0e-57 225.3 161 66.5
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 5.0e-57 225.3 160 66.9
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 6.5e-57 224.9 233 50.6
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.1e-56 224.2 191 58.6
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.1e-56 224.2 202 55.0
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.5e-56 223.0 169 59.2
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 4.2e-56 222.2 195 55.4
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 7.2e-56 221.5 221 52.9
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.2e-55 220.7 191 56.0
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.7e-55 219.5 174 60.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 2.7e-55 219.5 220 53.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.3e-54 217.2 179 57.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.3e-54 217.2 243 48.6
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 9.7e-53 211.1 163 60.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.3e-52 210.7 140 72.1
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 6.3e-52 208.4 140 72.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 8.2e-52 208.0 188 58.5
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 8.5e-49 198.0 140 69.3
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 8.5e-49 198.0 181 54.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 2.7e-47 193.0 164 61.6
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 5.1e-46 188.7 195 52.3
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 3.3e-45 186.0 209 47.4
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 5.3e-43 178.7 157 56.7
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 5.3e-43 178.7 161 52.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 3.8e-41 172.6 212 44.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 4.2e-40 169.1 197 44.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.7e-39 165.6 168 54.2
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 3.0e-38 162.9 140 52.9
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 5.7e-37 158.7 118 63.6
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 7.4e-37 158.3 104 76.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.8e-35 153.7 232 39.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.5e-29 134.0 99 62.6
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.3e-25 120.9 208 38.9
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 2.2e-25 120.2 170 38.8
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 4.0e-22 109.4 77 63.6
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.6e-21 106.7 76 61.8
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.1e-19 101.3 104 48.1
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 7.7e-18 95.1 125 44.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 5.0e-17 92.4 78 55.1
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 2.1e-15 87.0 63 65.1
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.6e-13 80.1 54 68.5
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 4.1e-11 72.8 78 43.6
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.9e-09 66.6 164 28.0
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 4.3e-08 62.8 54 53.7


User provided reference genes

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