Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 7.1e-122 441.4 390 100.0
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 2.4e-93 346.7 392 88.0
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.8e-91 339.3 387 87.1
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 4.2e-90 335.9 387 87.1
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 4.2e-90 335.9 387 87.1
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 4.2e-90 335.9 387 87.1
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 1.0e-88 331.3 387 87.3
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 7.4e-87 325.1 392 85.5
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 3.7e-86 322.8 381 85.6
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 4.8e-86 322.4 391 81.3
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 8.2e-86 321.6 390 85.6
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 5.3e-85 318.9 425 72.5
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 3.4e-84 316.2 394 81.2
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 4.5e-84 315.8 385 62.1
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 3.8e-83 312.8 390 84.4
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.9e-82 310.5 385 63.6
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.6e-81 306.2 390 83.6
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 5.1e-80 302.4 384 83.1
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 8.8e-80 301.6 384 82.6
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 1.3e-78 297.7 384 82.3
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 4.8e-78 295.8 390 80.0
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 1.1e-77 294.7 379 54.9
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 9.1e-77 291.6 397 79.1
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 2.0e-76 290.4 384 73.2
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 5.0e-75 285.8 394 48.2
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 1.9e-74 283.9 386 81.1
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 8.8e-72 275.0 396 77.8
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 1.1e-71 274.6 359 83.8
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 1.5e-71 274.2 395 77.7
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.5e-71 274.2 387 50.6
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 4.4e-71 272.7 390 76.2
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 7.4e-71 271.9 395 68.1
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 1.7e-70 270.8 380 75.3
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.7e-70 270.8 387 50.1
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 1.1e-69 268.1 389 54.2
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 1.6e-68 264.2 397 75.6
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 2.6e-68 263.5 388 70.9
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 3.5e-68 263.1 379 47.2
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 4.5e-68 262.7 384 63.3
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 7.7e-68 261.9 391 76.2
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 7.7e-68 261.9 384 59.1
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.0e-67 261.5 392 74.0
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 2.2e-67 260.4 379 56.7
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 3.8e-67 259.6 350 54.6
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 5.0e-67 259.2 379 46.7
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 5.0e-67 259.2 412 52.7
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 1.1e-66 258.1 389 64.8
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 1.5e-66 257.7 412 60.4
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 1.5e-66 257.7 386 76.2
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 1.9e-66 257.3 386 76.7
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 7.2e-66 255.4 426 55.6
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 2.7e-65 253.4 426 46.9
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 4.7e-65 252.7 395 45.1
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 1.8e-64 250.8 392 72.4
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 2.3e-64 250.4 392 73.2
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 3.0e-64 250.0 387 49.1
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 5.2e-64 249.2 386 68.4
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 5.2e-64 249.2 396 73.7
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 6.7e-64 248.8 388 73.5
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 1.1e-63 248.1 392 72.7
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 2.6e-63 246.9 395 61.8
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 5.7e-63 245.7 391 63.2
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 7.5e-63 245.4 385 46.8
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 1.7e-62 244.2 388 65.5
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 1.7e-62 244.2 384 72.7
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 1.1e-61 241.5 389 57.1
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 1.4e-61 241.1 389 63.8
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 3.1e-61 240.0 413 71.2
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 9.1e-61 238.4 388 63.1
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 2.0e-60 237.3 389 45.8
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 3.5e-60 236.5 382 64.7
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 3.5e-60 236.5 383 72.6
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 5.9e-60 235.7 389 45.8
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 5.9e-60 235.7 385 75.8
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 1.0e-59 235.0 385 63.9
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 2.9e-59 233.4 379 39.8
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 2.9e-59 233.4 369 39.3
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 3.8e-59 233.0 394 60.7
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 8.5e-59 231.9 393 68.7
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 4.2e-58 229.6 400 60.8
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 4.2e-58 229.6 400 60.8
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 1.2e-57 228.0 403 60.8
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.6e-57 227.6 384 45.1
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 2.1e-57 227.3 385 63.4
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 3.6e-57 226.5 360 46.9
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 3.0e-56 223.4 393 36.4
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 5.2e-56 222.6 397 64.7
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 1.2e-55 221.5 385 71.9
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 1.5e-55 221.1 402 59.7
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 1.5e-55 221.1 396 71.5
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 4.4e-55 219.5 438 60.5
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 5.7e-55 219.2 347 78.1
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 9.8e-55 218.4 384 62.5
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 3.7e-54 216.5 387 72.1
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 3.7e-54 216.5 396 69.4
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 6.3e-54 215.7 343 72.6
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 9.1e-53 211.8 381 61.4
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 9.1e-53 211.8 392 36.2
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 4.5e-52 209.5 341 75.4
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 7.7e-52 208.8 378 45.0
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.3e-51 208.0 313 60.7
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 2.2e-51 207.2 387 68.0
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 6.5e-51 205.7 386 64.0
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 7.2e-50 202.2 406 60.8
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 2.7e-49 200.3 280 52.1
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 2.7e-49 200.3 335 50.4
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 3.6e-49 199.9 388 59.0
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 3.6e-49 199.9 388 46.4
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 3.6e-49 199.9 393 54.2
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 8.0e-49 198.7 408 39.2
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 8.0e-49 198.7 398 67.8
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 4.4e-47 193.0 328 44.5
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 4.4e-47 193.0 481 58.2
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 4.4e-47 193.0 338 73.4
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 9.8e-47 191.8 343 44.0
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 2.2e-46 190.7 392 33.9
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 1.3e-43 181.4 309 73.5
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 2.9e-43 180.3 390 49.2
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 8.6e-43 178.7 385 57.1
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 9.5e-42 175.3 280 39.6
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 1.6e-41 174.5 406 32.3
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 2.8e-41 173.7 409 57.9
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.8e-40 171.0 393 34.4
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 3.0e-40 170.2 401 62.6
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 8.9e-40 168.7 389 58.4
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 2.0e-39 167.5 388 56.7
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 2.6e-39 167.2 278 79.9
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 7.5e-39 165.6 278 75.5
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 1.7e-38 164.5 363 31.7
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 1.7e-38 164.5 384 60.2
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 3.7e-38 163.3 104 75.0
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.4e-37 161.4 405 44.4
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 5.4e-37 159.5 105 75.2
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 5.4e-37 159.5 487 56.5
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 1.6e-36 157.9 280 72.9
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 1.6e-36 157.9 164 50.6
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 2.0e-36 157.5 111 72.1
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 2.7e-36 157.1 344 66.0
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 2.7e-36 157.1 105 73.3
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.5e-36 156.8 116 66.4
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 2.3e-35 154.1 391 54.7
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 8.6e-35 152.1 382 32.2
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 1.1e-34 151.8 110 66.4
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 5.6e-34 149.4 376 29.3
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 2.1e-33 147.5 261 36.4
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 3.6e-33 146.7 397 36.5
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 1.0e-32 145.2 105 68.6
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 3.7e-30 136.7 330 29.7
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 5.4e-29 132.9 403 54.6
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 7.8e-28 129.0 343 27.7
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 5.0e-27 126.3 108 63.0
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 4.3e-26 123.2 377 28.1
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 2.6e-23 114.0 120 50.8
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 9.8e-23 112.1 124 46.0
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 2.9e-22 110.5 60 83.3
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.4e-21 107.5 401 32.2
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 4.1e-21 106.7 340 25.9
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 1.2e-20 105.1 213 32.9
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.1e-20 104.4 152 36.8
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 3.5e-20 103.6 405 26.2
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 1.6e-17 94.7 147 36.7
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 1.4e-16 91.7 379 24.8
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 5.2e-16 89.7 71 64.8
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 2.0e-15 87.8 99 49.5
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 5.8e-15 86.3 50 76.0
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 2.2e-14 84.3 50 74.0
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 1.9e-13 81.3 42 83.3
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 3.2e-13 80.5 367 39.8
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 1.2e-12 78.6 405 53.3
BolC6t38646H Brassica oleracea HOM05D003913 ORTHO05D004803 4.0e-08 63.5 150 28.7
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 2.0e-07 61.2 50 50.0
CSS0010217 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 9.9e-07 58.9 38 68.4


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