Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 4.3e-101 371.3 188 100.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 7.9e-87 323.9 186 87.1
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.8e-84 314.7 186 83.9
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.2e-84 313.9 186 83.9
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-83 313.5 186 83.3
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.4e-83 313.2 190 85.3
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 4.1e-83 311.6 190 84.2
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.8e-78 296.2 188 75.5
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.0e-77 292.7 188 75.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 3.3e-77 292.0 188 73.4
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 4.4e-77 291.6 195 72.3
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 4.4e-77 291.6 186 75.3
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 7.5e-77 290.8 189 76.2
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 3.7e-76 288.5 188 72.3
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.4e-75 286.6 187 74.3
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.4e-75 286.6 188 71.8
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.8e-75 286.2 188 71.8
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.8e-75 286.2 186 74.2
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 5.3e-75 284.6 195 71.8
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 5.3e-75 284.6 194 72.2
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 1.2e-74 283.5 188 72.9
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.0e-74 282.7 188 71.8
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.7e-74 282.3 188 71.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 2.7e-74 282.3 188 71.3
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 7.7e-74 280.8 188 72.3
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 7.7e-74 280.8 188 71.8
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.0e-73 280.4 188 72.9
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.7e-73 279.6 189 69.8
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.8e-73 278.5 188 70.2
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 3.8e-73 278.5 188 70.2
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 8.5e-73 277.3 184 73.4
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.1e-72 276.9 188 70.2
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.9e-72 276.2 188 71.8
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 2.5e-72 275.8 186 71.5
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 3.2e-72 275.4 188 70.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.2e-71 273.5 183 71.6
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.6e-71 273.1 188 68.6
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.6e-71 271.9 191 70.7
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 4.7e-71 271.6 188 70.7
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 6.1e-71 271.2 186 70.4
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.0e-70 270.4 188 70.2
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.4e-70 270.0 186 68.8
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.3e-70 269.2 184 70.7
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.3e-70 269.2 183 71.0
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 3.0e-70 268.9 186 69.9
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 3.0e-70 268.9 186 69.9
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.0e-70 268.5 186 68.8
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 6.8e-70 267.7 188 69.1
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.2e-69 266.9 184 69.0
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.2e-69 266.9 185 71.4
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.0e-69 266.2 183 70.5
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.0e-69 266.2 192 65.6
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 2.6e-69 265.8 187 68.4
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 4.4e-69 265.0 190 68.4
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.7e-69 264.6 191 68.6
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 9.8e-69 263.8 201 63.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.3e-68 263.5 198 63.6
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.3e-68 263.5 186 67.7
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.7e-68 263.1 191 68.1
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 186 66.7
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 200 63.0
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 2.8e-68 262.3 192 64.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.7e-68 261.9 188 67.0
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 4.8e-68 261.5 198 63.1
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 6.3e-68 261.2 188 67.6
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 6.3e-68 261.2 187 68.4
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 8.3e-68 260.8 193 66.8
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 8.3e-68 260.8 186 67.7
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.1e-67 260.4 197 66.0
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.1e-67 260.4 194 65.5
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.4e-67 260.0 193 65.8
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.8e-67 259.6 190 70.5
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.1e-67 258.8 188 68.6
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 7.0e-67 257.7 186 67.2
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 9.1e-67 257.3 186 65.1
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 9.1e-67 257.3 186 66.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 2.7e-66 255.8 186 67.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 3.5e-66 255.4 186 66.7
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.0e-65 251.5 178 68.5
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.5e-64 250.0 185 67.0
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 2.5e-64 249.2 197 64.0
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.2e-64 248.4 192 63.5
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.2e-64 248.4 192 63.5
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 3.6e-63 245.4 159 79.2
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 6.1e-63 244.6 190 65.3
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.2e-62 241.5 216 57.9
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.4e-61 238.8 202 60.9
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 9.8e-61 237.3 177 59.9
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 2.8e-60 235.7 260 50.4
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 1.5e-56 223.4 188 62.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.9e-56 223.0 155 69.0
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 4.3e-56 221.9 134 75.4
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 2.1e-55 219.5 153 68.0
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 6.1e-55 218.0 186 59.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 8.0e-55 217.6 155 68.4
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.0e-54 215.7 154 66.2
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 2.6e-53 212.6 153 68.6
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 5.7e-53 211.5 179 56.4
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 5.7e-53 211.5 182 56.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.7e-52 209.9 155 68.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 9.2e-51 204.1 188 56.4
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.7e-50 202.6 170 61.8
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 3.5e-50 202.2 157 65.6
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 5.0e-49 198.4 155 61.9
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.9e-41 172.2 138 58.0
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.5e-40 169.5 189 48.7
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 4.7e-39 165.2 188 50.5
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.7e-36 155.6 190 47.9
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.7e-33 146.7 133 59.4
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 7.3e-32 141.4 187 44.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.8e-30 136.7 182 45.1
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 3.8e-28 129.0 72 80.6
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.5e-24 117.1 187 38.0
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 8.7e-17 91.3 56 71.4


User provided reference genes

Program Settings