Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 2.4e-93 345.5 178 100.0
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.6e-60 236.5 178 72.5
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 3.0e-59 232.3 179 71.5
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 2.3e-43 179.5 182 61.5
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.6e-41 173.3 181 60.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 4.8e-41 171.8 179 58.1
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 8.2e-41 171.0 179 60.9
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.5e-39 166.8 171 63.7
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.4e-39 165.6 181 58.6
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.7e-38 163.3 180 57.2
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 4.9e-38 161.8 181 56.9
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 3.2e-37 159.1 178 57.9
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 3.2e-37 159.1 176 57.4
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.2e-37 159.1 173 57.8
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 4.2e-37 158.7 181 56.4
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 5.5e-37 158.3 178 56.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.9e-36 154.5 173 60.7
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.3e-35 153.7 178 57.3
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.8e-35 153.3 173 60.7
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.8e-35 153.3 173 60.7
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.3e-35 152.9 180 56.1
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 5.1e-35 151.8 180 54.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 5.1e-35 151.8 173 60.1
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 5.1e-35 151.8 173 60.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 5.1e-35 151.8 178 55.1
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 5.1e-35 151.8 178 55.1
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 6.7e-35 151.4 184 54.3
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 8.7e-35 151.0 187 54.5
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.9e-34 149.8 191 54.5
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 4.3e-34 148.7 180 55.0
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 9.7e-34 147.5 176 57.4
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.3e-33 147.1 179 55.3
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.6e-33 146.7 122 66.4
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.6e-33 146.7 180 55.0
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 2.2e-33 146.4 180 55.0
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.2e-33 146.4 165 55.2
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.8e-33 146.0 159 57.9
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.7e-33 145.6 165 55.2
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 6.3e-33 144.8 137 62.0
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.3e-33 144.8 177 55.9
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 8.2e-33 144.4 128 66.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 8.2e-33 144.4 180 54.4
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 1.1e-32 144.1 176 54.5
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.1e-32 144.1 138 63.0
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.4e-32 143.7 181 53.0
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.4e-32 143.7 127 65.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.4e-32 142.9 181 55.8
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 3.1e-32 142.5 181 52.5
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.1e-32 142.1 183 53.0
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 5.3e-32 141.7 144 59.7
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 5.3e-32 141.7 149 59.1
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-31 140.2 178 51.7
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-31 140.2 178 51.7
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.5e-31 140.2 141 60.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.5e-31 140.2 156 58.3
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.5e-31 140.2 127 64.6
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.0e-31 139.8 107 73.8
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.6e-31 139.4 99 77.8
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.4e-31 139.0 176 53.4
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 5.9e-31 138.3 112 68.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 5.9e-31 138.3 136 61.0
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 7.6e-31 137.9 119 66.4
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.0e-30 137.5 134 61.9
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.0e-30 137.5 93 79.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.0e-30 137.5 170 56.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.3e-30 137.1 124 63.7
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.5e-30 134.8 177 54.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.1e-29 134.0 178 51.7
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 2.5e-29 132.9 179 51.4
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 5.5e-29 131.7 177 52.0
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 7.2e-29 131.3 175 50.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 7.2e-29 131.3 175 50.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 9.3e-29 131.0 159 53.5
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 2.7e-28 129.4 180 51.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 2.7e-28 129.4 115 61.7
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 2.7e-28 129.4 115 65.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.7e-28 129.4 138 57.2
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.7e-28 129.4 186 50.0
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.6e-28 129.0 174 50.6
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 4.6e-28 128.6 123 63.4
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 7.9e-28 127.9 177 52.0
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 7.9e-28 127.9 86 81.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.0e-27 127.5 122 62.3
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.8e-27 126.7 123 62.6
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.3e-27 126.3 179 50.3
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 3.0e-27 125.9 181 48.1
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 3.9e-27 125.6 174 51.1
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 5.1e-27 125.2 96 69.8
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 6.7e-27 124.8 123 60.2
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 8.8e-27 124.4 171 51.5
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.5e-26 123.6 96 68.8
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.5e-26 123.6 107 64.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.9e-26 123.2 137 58.4
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.5e-26 122.9 180 48.3
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.5e-26 122.9 177 49.7
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 3.3e-26 122.5 96 68.8
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 3.3e-26 122.5 96 68.8
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.4e-26 121.3 128 55.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 9.7e-26 120.9 180 46.7
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 9.7e-26 120.9 136 57.4
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.7e-25 120.2 91 71.4
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.7e-25 120.2 91 71.4
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.7e-25 119.0 86 73.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 5.3e-24 115.2 84 73.8
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 2.5e-21 106.3 95 61.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.2e-21 105.9 178 41.0
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 4.2e-21 105.5 83 66.3
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 9.4e-21 104.4 83 68.7
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 9.4e-21 104.4 83 68.7
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 4.7e-20 102.1 96 62.5
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 2.3e-19 99.8 65 80.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.6e-15 86.3 116 48.3
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 6.5e-14 81.6 89 51.7
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 8.5e-14 81.3 82 52.4
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.0e-11 74.3 86 52.3
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 3.9e-11 72.4 97 46.4
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.5e-10 70.5 62 61.3


User provided reference genes

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