Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G031700 Prunus persica HOM05D000361 ORTHO05D007482 3.7e-85 318.2 160 100.0
Prupe.1G211500 Prunus persica HOM05D000361 ORTHO05D007482 8.3e-69 263.8 146 92.5
QL03p048338 Quercus lobata HOM05D000361 ORTHO05D007482 4.4e-62 241.5 148 83.8
CANSAT21G0886 Cannabis sativa HOM05D000361 ORTHO05D007482 5.8e-62 241.1 147 84.4
Cfa009472 Carpinus fangiana HOM05D002839 ORTHO05D007482 6.4e-61 237.7 148 82.4
Haze_12528 Corylus avellana HOM05D000361 ORTHO05D007482 6.4e-61 237.7 148 82.4
Nn4g22072 Nelumbo nucifera HOM05D000361 ORTHO05D007482 1.1e-60 236.9 148 81.8
Manes.08G099300 Manihot esculenta HOM05D000361 ORTHO05D007482 3.2e-60 235.3 148 81.8
CiPaw.06G111400 Carya illinoinensis HOM05D000361 ORTHO05D007482 4.1e-60 235.0 148 81.1
Ciclev10027769m.g Citrus clementina HOM05D000361 ORTHO05D007482 4.1e-60 235.0 148 82.4
GSVIVG01001119001 Vitis vinifera HOM05D000361 ORTHO05D007482 1.6e-59 233.0 148 81.8
FAN12G2733 Fragaria x ananassa HOM05D000361 ORTHO05D007482 2.1e-59 232.6 148 83.1
RcHm_v2.0_Chr4g0428411 Rosa chinensis HOM05D000361 ORTHO05D007482 2.1e-59 232.6 148 83.1
Cpa.g.sc1761.2 Carica papaya HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 78.4
Gohir.A09G002700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 78.4
Gohir.D09G002500 Gossypium hirsutum HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 78.4
Gorai.006G003100 Gossypium raimondii HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 78.4
Os11g0484300 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 80.4
Thecc.01G239700 Theobroma cacao HOM05D000361 ORTHO05D007482 1.3e-58 229.9 148 79.7
Psat0s4013g0080 Pisum sativum HOM05D000361 ORTHO05D007482 1.7e-58 229.6 147 81.0
Hund06727 Selenicereus undatus HOM05D000361 ORTHO05D007482 2.3e-58 229.2 148 79.1
Aqoxy5G02980 Aquilegia oxysepala HOM05D000361 ORTHO05D007482 3.9e-58 228.4 148 79.1
PSO478G1108 Papaver somniferum HOM05D000361 ORTHO05D007482 3.9e-58 228.4 148 79.7
TPR.G25402 Trifolium pratense HOM05D000361 ORTHO05D007482 3.9e-58 228.4 147 80.3
Actinidia30574 Actinidia chinensis HOM05D000361 ORTHO05D007482 5.1e-58 228.0 147 81.0
Ca_21434_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007482 5.1e-58 228.0 147 80.3
PSO017G0122 Papaver somniferum HOM05D000361 ORTHO05D007482 5.1e-58 228.0 148 79.1
Lalb_Chr17g0344991 Lupinus albus HOM05D000361 ORTHO05D007482 6.6e-58 227.6 148 79.1
CSS0019126 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 2.5e-57 225.7 147 79.6
CSS0044557 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 2.5e-57 225.7 147 79.6
DCAR_026439 Daucus carota HOM05D000361 ORTHO05D007482 2.5e-57 225.7 148 77.0
Potri.001G070500 Populus trichocarpa HOM05D000361 ORTHO05D007482 3.3e-57 225.3 148 80.4
PGR102G2757 Punica granatum HOM05D000361 ORTHO05D007482 5.6e-57 224.6 148 77.7
COL.COLO4_36324 Corchorus olitorius HOM05D000361 ORTHO05D007482 7.3e-57 224.2 149 79.2
Duzib160G0854 Durio zibethinus HOM05D000361 ORTHO05D007482 9.5e-57 223.8 148 76.4
vmacro15518 Vaccinium macrocarpon HOM05D000361 ORTHO05D007482 9.5e-57 223.8 147 78.9
MBI11_g23193_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007482 1.2e-56 223.4 148 79.7
TWI18G1079 Tripterygium wilfordii HOM05D000361 ORTHO05D007482 1.2e-56 223.4 148 79.1
Gohir.A03G086700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 3.6e-56 221.9 148 74.3
Medtr4g122270 Medicago truncatula HOM05D000361 ORTHO05D007482 3.6e-56 221.9 147 78.2
Sc10g0009070 Simmondsia chinensis HOM05D000361 ORTHO05D007482 3.6e-56 221.9 148 77.0
Migut.K01134 Erythranthe guttata HOM05D000361 ORTHO05D007482 8.1e-56 220.7 148 75.7
MSTRG.8063 Avicennia marina HOM05D000361 ORTHO05D007482 1.1e-55 220.3 148 74.3
Gorai.005G120400 Gossypium raimondii HOM05D000361 ORTHO05D007482 1.1e-55 220.3 148 74.3
TAR629G3206 Trochodendron aralioides HOM05D000361 ORTHO05D007482 1.1e-55 220.3 148 79.1
Eucgr.B03569 Eucalyptus grandis HOM05D000361 ORTHO05D007482 1.4e-55 219.9 148 77.7
FAN17G1841 Fragaria x ananassa HOM05D000361 ORTHO05D007482 1.4e-55 219.9 135 83.7
MD16G1144700 Malus domestica HOM05D000361 ORTHO05D007482 1.4e-55 219.9 143 81.8
Sabra01G0049500 Salix brachista HOM05D000361 ORTHO05D007482 1.8e-55 219.5 148 77.7
Ah.14g085960 Amaranthus hybridus HOM05D000361 ORTHO05D007482 2.3e-55 219.2 149 75.8
Rhsim13G0167000 Rhododendron simsii HOM05D000361 ORTHO05D007482 2.3e-55 219.2 147 78.2
Lsat_1_v5_gn_3_33321 Lactuca sativa HOM05D000361 ORTHO05D007482 3.1e-55 218.8 148 75.7
Lj4g0014568 Lotus japonicus HOM05D000361 ORTHO05D007482 6.8e-55 217.6 145 77.9
CDE05G0767 Ceratophyllum demersum HOM05D000361 ORTHO05D007482 8.9e-55 217.2 148 76.4
arahy.Tifrunner.gnm1.ann1.D87PD7 Arachis hypogaea HOM05D000361 ORTHO05D007482 1.2e-54 216.9 134 82.1
arahy.Tifrunner.gnm1.ann1.WNQC8Q Arachis hypogaea HOM05D000361 ORTHO05D007482 1.2e-54 216.9 134 82.1
Zm00001eb169610 Zea mays HOM05D000361 ORTHO05D007482 2.0e-54 216.1 141 79.4
Glyma.17G035000 Glycine max HOM05D000361 ORTHO05D007482 2.6e-54 215.7 148 77.0
CARHR036120 Cardamine hirsuta HOM05D000361 ORTHO05D007482 3.4e-54 215.3 148 75.0
AL1G52570 Arabidopsis lyrata HOM05D000361 ORTHO05D007482 4.4e-54 214.9 148 74.3
Carub.0001s3540 Capsella rubella HOM05D000361 ORTHO05D007482 5.8e-54 214.5 148 74.3
Thhalv10011214m.g Eutrema salsugineum HOM05D000361 ORTHO05D007482 9.9e-54 213.8 146 74.7
Sp1g33770 Schrenkiella parvula HOM05D000361 ORTHO05D007482 9.9e-54 213.8 146 74.7
Dinv06935 Davidia involucrata HOM05D000361 ORTHO05D007482 1.3e-53 213.4 139 79.1
Phvul.003G116100 Phaseolus vulgaris HOM05D000361 ORTHO05D007482 1.3e-53 213.4 148 76.4
MD13G1134100 Malus domestica HOM05D000361 ORTHO05D007482 2.9e-53 212.2 127 85.0
Lj3A1078T19 Lonicera japonica HOM05D000361 ORTHO05D007482 6.4e-53 211.1 135 80.0
BcaB07g33912 Brassica carinata HOM05D000361 ORTHO05D007482 1.4e-52 209.9 146 72.6
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 1.4e-52 209.9 136 78.7
CAN.G624.12 Capsicum annuum HOM05D000361 ORTHO05D007482 2.4e-52 209.1 136 78.7
Solyc11g040120.3 Solanum lycopersicum HOM05D000361 ORTHO05D007482 2.4e-52 209.1 136 78.7
PGSC0003DMG400002190 Solanum tuberosum HOM05D000361 ORTHO05D007482 2.4e-52 209.1 136 78.7
SGA_v2.0_scaffold258G45751 Striga asiatica HOM05D000361 ORTHO05D007482 2.4e-52 209.1 146 73.3
A08p06290 Brassica napus HOM05D000361 ORTHO05D007482 4.1e-52 208.4 146 74.0
BraA08t32632Z Brassica rapa HOM05D000361 ORTHO05D007482 4.1e-52 208.4 146 74.0
ECA246G5349 Erigeron canadensis HOM05D000361 ORTHO05D007482 5.4e-52 208.0 137 76.6
THA.LOC104801409 Tarenaya hassleriana HOM05D000361 ORTHO05D007482 5.4e-52 208.0 151 72.8
BcaB04g17580 Brassica carinata HOM05D000361 ORTHO05D007482 7.1e-52 207.6 146 73.3
Nitab4.5_0005286g0020 Nicotiana tabacum HOM05D000361 ORTHO05D007482 7.1e-52 207.6 135 77.8
Sopen11g017320 Solanum pennellii HOM05D000361 ORTHO05D007482 7.1e-52 207.6 136 77.9
HPP92_023046 Vanilla planifolia HOM05D000361 ORTHO05D007482 7.1e-52 207.6 148 75.0
BcaC07g37281 Brassica carinata HOM05D000361 ORTHO05D007482 1.2e-51 206.8 146 73.3
C08p07110 Brassica napus HOM05D000361 ORTHO05D007482 1.2e-51 206.8 146 73.3
BolC8t47556H Brassica oleracea HOM05D000361 ORTHO05D007482 1.2e-51 206.8 146 73.3
Glyma.07G238400 Glycine max HOM05D000361 ORTHO05D007482 1.2e-51 206.8 148 75.0
AUR62034021 Chenopodium quinoa HOM05D000361 ORTHO05D007482 1.6e-51 206.5 149 73.2
AT1G44900 Arabidopsis thaliana HOM05D000361 ORTHO05D007482 2.1e-51 206.1 148 72.3
Peaxi162Scf01167g00115 Petunia axillaris HOM05D000361 ORTHO05D007482 2.7e-51 205.7 135 77.0
HPP92_023097 Vanilla planifolia HOM05D000361 ORTHO05D007482 3.5e-51 205.3 138 78.3
BcaC08g42885 Brassica carinata HOM05D000361 ORTHO05D007482 7.8e-51 204.1 146 72.6
C06p01030 Brassica napus HOM05D000361 ORTHO05D007482 7.8e-51 204.1 146 72.6
BolC6t35239H Brassica oleracea HOM05D000361 ORTHO05D007482 7.8e-51 204.1 146 72.6
Hma1.2p1_0738F.1_g210960 Hydrangea macrophylla HOM05D000361 ORTHO05D007482 3.0e-50 202.2 139 75.5
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 3.0e-50 202.2 148 67.6
ClCG10G013030 Citrullus lanatus HOM05D000361 ORTHO05D007482 6.6e-50 201.1 154 70.1
VMungo1215G2015 Vigna mungo HOM05D000361 ORTHO05D007482 6.6e-50 201.1 129 78.3
A10p07200 Brassica napus HOM05D000361 ORTHO05D007482 8.6e-50 200.7 146 71.2
BraSC36t46098Z Brassica rapa HOM05D000361 ORTHO05D007482 8.6e-50 200.7 146 71.2
MELO3C026749.2 Cucumis melo HOM05D000361 ORTHO05D007482 1.5e-49 199.9 148 71.6
CsaV3_3G032880 Cucumis sativus L. HOM05D000361 ORTHO05D007482 1.5e-49 199.9 148 71.6
Oeu010265.1 Olea europaea HOM05D000361 ORTHO05D007482 1.9e-49 199.5 139 75.5
Sed0006329 Sechium edule HOM05D000361 ORTHO05D007482 3.3e-49 198.7 148 70.3
SGA_v2.0_scaffold258G45762 Striga asiatica HOM05D000361 ORTHO05D007482 4.3e-49 198.4 146 69.2
Aa31LG3G14210 Aethionema arabicum HOM05D000361 ORTHO05D007482 9.5e-49 197.2 144 70.8
HanXRQChr06g0175361 Helianthus annuus HOM05D000361 ORTHO05D007482 2.8e-48 195.7 132 74.2
SalBow2G1437 Salvia bowleyana HOM05D000361 ORTHO05D007482 4.7e-48 194.9 148 69.6
Hma1.2p1_0738F.1_g210950 Hydrangea macrophylla HOM05D000361 ORTHO05D007482 1.1e-47 193.7 140 74.3
Atru.chr12.1475 Acer truncatum HOM05D000361 ORTHO05D007482 5.2e-47 191.4 138 73.2
Cc11_g14860 Coffea canephora HOM05D000361 ORTHO05D007482 5.2e-47 191.4 138 73.9
ATR0582G147 Amborella trichopoda HOM05D000361 ORTHO05D007482 1.5e-46 189.9 131 74.0
SGA_v2.0_scaffold98G29273 Striga asiatica HOM05D000361 ORTHO05D007482 2.9e-45 185.7 152 65.8
SHI04104 Sapria himalayana HOM05D000361 ORTHO05D007482 1.9e-44 183.0 163 60.1
SGA_v2.0_scaffold98G29280 Striga asiatica HOM05D005483 ORTHO05D007482 4.6e-43 178.3 140 65.7
SGA_v2.0_scaffold98G29270 Striga asiatica HOM05D000361 ORTHO05D007482 6.0e-43 177.9 140 67.1
FvH4_4g22180 Fragaria vesca HOM05D000361 ORTHO05D007482 1.0e-42 177.2 148 68.9
EL10Ac8g19503 Beta vulgaris HOM05D000361 ORTHO05D007482 9.6e-41 170.6 142 64.8
SMO340G0145 Selaginella moellendorffii HOM05D000361 ORTHO05D007482 3.5e-35 152.1 118 59.3
SGA_v2.0_scaffold98G29268 Striga asiatica HOM05D000361 ORTHO05D007482 8.1e-32 141.0 116 67.2
CBR_g30227 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-30 136.7 144 48.6
Psat6g019600 Pisum sativum HOM05D000361 ORTHO05D007482 7.6e-30 134.4 94 73.4
Gohir.D02G106100 Gossypium hirsutum HOM05D000361 ORTHO05D007482 7.1e-28 127.9 74 81.1
AagrBONN_evm.TU.Sc2ySwM_228.1650 Anthoceros agrestis HOM05D000361 ORTHO05D007482 1.6e-27 126.7 123 48.8
Mapoly0007s0014 Marchantia polymorpha HOM05D000361 ORTHO05D007482 8.7e-26 120.9 133 44.4
Pp3c1_34820 Physcomitrium patens HOM05D000361 ORTHO05D007482 9.6e-25 117.5 128 46.1
PRCOL_00001965 Prasinoderma coloniale HOM05D000361 ORTHO05D007482 2.1e-19 99.8 130 40.8
COL.COLO4_21590 Corchorus olitorius HOM05D000361 ORTHO05D029119 1.3e-18 97.1 82 67.1
MCO02G357 Micromonas commoda HOM05D000361 ORTHO05D007482 1.1e-15 87.4 129 33.3
FvH4_5g16060 Fragaria vesca HOM05D000361 ORTHO05D007482 6.9e-15 84.7 46 87.0
COL.COLO4_08826 Corchorus olitorius HOM05D000361 ORTHO05D029119 3.4e-14 82.4 85 56.5
AUR62042521 Chenopodium quinoa HOM05D000361 ORTHO05D007482 8.4e-13 77.8 83 53.0
Cre07.g338000 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D007482 3.1e-07 59.3 166 25.9
Haze_26192 Corylus avellana HOM05D000361 ORTHO05D007482 4.1e-07 58.9 141 26.2


User provided reference genes

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