Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 8.5e-218 760.0 370 100.0
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.1e-193 679.9 369 88.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 8.3e-181 637.1 360 84.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.5e-177 625.5 352 84.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 8.9e-175 617.1 359 81.6
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.9e-169 599.4 416 71.6
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 5.6e-169 597.8 416 71.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 9.6e-169 597.0 360 79.2
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.1e-168 595.9 353 79.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.8e-168 595.5 359 78.6
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 3.6e-168 595.1 356 78.1
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.0e-166 589.3 351 79.5
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.9e-164 582.8 369 74.5
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 5.4e-164 581.3 356 79.2
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.3e-164 580.5 366 76.0
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 1.0e-162 577.0 357 77.6
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.9e-162 575.1 330 82.7
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 5.1e-162 574.7 369 72.6
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 3.3e-161 572.0 354 76.3
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 5.6e-161 571.2 353 76.5
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 7.3e-161 570.9 367 74.1
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.6e-160 569.7 367 73.0
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.6e-160 569.7 353 76.2
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.8e-160 568.9 353 75.4
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.6e-160 568.5 353 75.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 4.8e-160 568.2 356 76.7
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.4e-159 566.6 353 75.1
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.6e-158 562.4 456 64.0
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.3e-157 560.1 355 75.8
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.4e-157 557.8 352 72.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 8.4e-157 557.4 353 75.4
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.1e-156 557.0 367 71.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.2e-156 555.4 357 71.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 3.0e-154 548.9 351 73.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 8.7e-154 547.4 351 73.2
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 2.5e-153 545.8 350 71.4
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 3.7e-152 542.0 350 72.9
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 3.7e-152 542.0 353 72.5
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.1e-151 540.4 354 72.6
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.8e-151 539.7 353 72.5
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 5.3e-151 538.1 354 72.6
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.2e-150 537.0 384 66.9
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 4.9e-149 531.6 351 72.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.9e-148 529.6 352 71.0
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 9.3e-148 527.3 354 71.5
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.2e-147 526.9 356 71.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 2.7e-147 525.8 363 71.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.5e-145 519.2 360 68.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.1e-144 516.2 364 68.1
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.6e-142 509.2 506 54.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 8.4e-141 504.2 352 65.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 8.4e-141 504.2 328 72.3
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.4e-140 503.4 352 67.0
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 9.3e-140 500.7 353 70.3
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 4.6e-139 498.4 353 68.0
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.0e-138 495.7 358 64.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.5e-137 492.7 355 67.0
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.5e-137 492.7 355 67.0
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.7e-137 491.5 355 66.8
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.8e-135 486.5 352 65.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.6e-131 471.9 362 63.3
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 9.7e-129 464.2 472 52.5
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.4e-124 450.3 354 63.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.0e-117 427.6 286 70.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.7e-94 349.7 290 60.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 3.8e-93 345.9 241 68.9
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 6.6e-93 345.1 191 81.7
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 5.7e-89 332.0 357 45.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 5.4e-87 325.5 197 76.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.7e-85 320.5 358 46.6
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.6e-85 318.2 343 52.8
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 4.1e-79 299.3 215 69.3
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 2.5e-68 263.5 162 73.5
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.4e-65 253.1 146 76.7
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 9.2e-63 245.0 249 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 3.9e-61 239.6 235 50.2
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 4.0e-58 229.6 141 72.3
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-55 221.1 357 37.3
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.0e-53 214.9 159 67.3
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 8.1e-43 178.7 422 29.1
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 3.1e-42 176.8 127 73.2
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.5e-41 174.5 116 70.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.0e-37 160.2 396 30.8
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-30 138.3 74 81.1
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.0e-30 136.0 139 57.6
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 6.7e-29 132.5 70 82.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-28 131.3 104 56.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 9.6e-28 128.6 70 75.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 9.6e-28 128.6 70 75.7
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.8e-27 126.3 102 61.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.3e-27 125.9 101 55.4
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.8e-24 116.7 113 54.9
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.5e-23 112.8 67 80.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.2e-23 112.5 67 79.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-22 110.5 67 77.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 6.1e-22 109.4 292 27.4
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.9e-22 109.0 67 77.6
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.3e-19 101.7 161 42.9
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 8.2e-19 99.0 64 64.1
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.1e-18 98.6 80 61.2
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.1e-18 96.7 88 58.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.3e-18 96.3 93 47.3
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-17 95.1 53 73.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.0e-13 80.5 54 63.0
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 9.1e-10 68.9 97 44.3
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.2e-09 68.6 121 43.0
Cpa.g.sc21.203 Carica papaya HOM05D007327 ORTHO05D118724 5.9e-09 66.2 48 54.2
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 7.7e-09 65.9 57 54.4


User provided reference genes

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